Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: JARID2
Assembly: GCA_015732765.1
Location: NC:117232436-117252833[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-21 1e-18 67.2 0.0 6 89 1563 1644 1558 1644 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-21	1e-18	67.2	0.0	6	89	1563	1644	1558	1644	0.93

Sequence Information

Coding Sequence: atggttGTATCGAAGGATGGCAAGCGGCGACGGAAAGTTGGTTCCGCGGCGGCGGCTAGCACCAACGCGAACGCCGCCGGTTCCGGATCGTCCCCAGCGGGTGTGACTCCGTCCGGTGGGGGAGCCGGAACGcgcagtggtggtggtggcggaggTTCTGGAGCGGCTGCTGCAGCCGCGGTGTCGCCAGCCGCCAGAGATAGTCCCGAGAGGGACCTTTCTCCGCCGGAGGTGCCCAAAAGACCTAAAGTGCAAGCACAGCGCAAGTTCGCCCAGGGCCAGGGAGCAGCCTCCACATCGGCATATCTTAACTTTGCCGCCAATCCATCAAACTCATCAAAGGATGCACAAAACCGATCGGCCGACGCCGGCCACGTTCCGGAGCTGCTGCCCAACATGCGCCCAAACACCGAGGATTTCCTCACGTTTCTGTGCTTTCGCGGCACGAACGTGCTTCCGCCCAGTTTGGACTTTTTCAACACGGCCAGCCAACAGCAATCGGCGTCCGGATCCGCGCCCAAGCCGGTCCCTTCGACATCTGCCACGGCGTCGTCTGCTACGACGGTACCACAACAAGCTGGTACATCTGCTAAAAAGGCGCCTGAGGTTTCTCCGCCTGAAACGGCTAAAAAGGAGGAAAATGGCTCCACGGACAAGAAAGTGGAACAGCCGGAAAAGCCTGCATTTATGCCGTTTGCCGTGCGGAAGCGTGCCGAGCAACATCCGGAAAATCGCCGGGTGCAAACGGTGCAAGCTCTGCGGAAGAAGTACCACGAACAGCGAATGGCCAAGTTACGCGTAACGGCGTACAATAAACAGACGCGAGGTGGGAATGTCAAGGACAAGGCCGAGGCGGAGGACGACGAGGCAGACGTGGAAGATTTGCAAGCGACTGAAAGTCCTAGGAAAGATTCGGCTAAGAAAGAGAAGGTAACACCCGCGAAGAAGAAGGTGGTGACGACTAAAAAGAATGCCAAGAAGACTGCAAAAGGCGCTAAGAATGAAAACGTACAGGATTTGATTGATATTAAGGTAGTTTTGAACAAGGATGATGTTGAAATGAAGAACgtatcaaatgaaactaaaaaggAGCCCAAAAAAGAAGTTGCAGCTTCGAAAACTCCAGCCAAGGGAGCCAAAAGGAAATCGTTGAACTCGGAAGACAACGAAAAACGAACTACGAGACTATCGGCACTGCGGAGTCCGCAACCGAACACTTCAACGGTGGATGTGGAACCGCCAAAGCCAAAAGAAGAAGTAGCTGAGGCTCCCGCTGTACTGGACTTCTCGTCCGACGACGATGAACCTCTTCTCAAGAGGGCCGCAGCCAAGAAGAAGGCCACGGCGCGCAAAGCATCCGCTAAAAAGGGTCGCAAatcggaaccgattccggagaaAGCACCCGAAGAACTTCCGGAGAAGAAAGCGCGACGCTCGGAATCGGTCAGCCGGAAGTCCGACGTCAGTTCGAAAAAGTCCGACACGCCAATCGTCAAAAGCACACCACCATCGCGAAAAGCCCCCCGGGGGAGGAAAAAGAAAGAAGAGGACTCACCTCCGGCGCCGGAAGAAGCTACGCCCGAGGCACCCGCGCCACCCGTCGTTGTCGAAGAGCCGGCTGAGGAGGTCGTCAAGTCTCCGCCCAAATCTACTCCGAAGAAAGGTGGTGCTGCTGCAGCGAGGAAGAAAAAGGTTGAACCGACGACCTCTCCGGTGGCGGCACCCGAAGTTGAGGAGAAAAAGATGAAGAAAACTCCGGAACCACCGCCGGAGGTGAGTGCTCGACCCAGCCGAAAAACAAAAGAGGCAGCTACGCTTTACATGGAGTTGATTGGGCGTAAGTTTAATCACGACGATAAATCCGACGATGACGCATCATCGCTGGATAGCTTGGAGTTGCCAAACGTGCGCCGGCTGGAGCAGATGGAGAATGAGCTCAAAGCGAACGCTGGAAAGAAGGATGAAAAAGGCTCCGCTAGGAAAGGTCGCCAAAAGAAGACCCCGCAAGAGGTTGTGGACAATAGTAAGCCCGTGGAAGCGCAAGAATCTAAACCGGTTGAGAAGAGTTTCAGTGATTCCGATGAGGAACCGCTGGCTTCCAAGTTCCAACGAAAGAAGCAGCAAATTCGACAAAAGCTGAAAGGAAAAGCGAAAAAATCTTCGCCGGCGAAGAAAACGCCAACAAAATCAAGCCCAGTAAAGGAGGCTGAACGTGAGGTTGAACCAAAATCAGAGGAGAAACCCTCGGAAGTTGTAGCCAATAGCGCCGAACCGCCCGTGGAACAATTACCGTCCCCTGTTCCGAAACCTGTAACGCCAGCCAAATCTCTCAAGTTACAGGCCACGCCTCCGCCGAAAACGTCCAGTCCCAAGGTTTCAACGCCACACACGCAAGCAGTGGTTCCTCTTCCGTTGATCAGTCCAGATGTAATCCGATCTCCCGGAACCGACGACCGAATAAACAAATCACACGATAACACATTCCAGTCCACGACGGTAGAGCCGAGTCCCGTTAAGCAGCCAACGTCCCAAGCGCAACCGTTTATTCGTACGGTCAAGCAAGTTCCCGCTGCGGAAGCTCCTGAAAAGCCAGCGGTCCCAGCCGTACCGGAAATACCCTTCAATCGCAATGTGAAGAATGACTTCAACCTGGACGAGTCGGACTTTCTCAAAGGGTTCGATCAAACTTCTCCGACCTCGCCCGTTGCTCCCAAGTCGAACTCGCTGCTTGGTAACCTTCTACCCAGCAAAGAAGAATCGGAGAAAATCTTTGGAATTGCCAGCGTCAGTCTGGCGCAAAGTTCCGGTCCGTTGGACACCAAGTGCACCTTAGGAAAGTGTGGCTCCGTTCACAAGCCTCCGCTGGGACCACCCGTGCTGACGGAATCCCTTCTCGGTGGCCACCTATCGCCACGCGATCGGCGGAAAACCAAGGTCAACATGACCCACGAACAGATCCAAAAATGGATCGATGAAACTTCGTGGTCGCCGGTTCCCGACGATCTGGACGCGGATTTGAAAATTCTGGAAACGCCcaaaactccaactccaacgcCGACATCCAGCGCATGGGAGAAACTGGTTGGAGAAAGTAAGTCGGAACCGGCCGCGGAAGCGCCCTCCCCCACgatacaaccgaaaaaagaggAAACAAAACCCCCAACGCCACAACCCAGCGGAAGTGGCTCGCGAGGGCCAACGCTGAAGGCCAAACCCGTCGCGGTGAAACCGGAAAAGGAAGTCCCTAAAGAACCGGTCGCGACACCGGAACCGCCAAAGACACCCGTCGCCGAGAAAAAGCCGCCCGTGGACGAGATCAAAGAGGAAGAAAAGGTCAAAACGTCCCCGAAGCTCCGCACACCTTCTCCGTTGAAGAAGGAAACCAAGAAGCCGGAACCCGCGGCTGTGAATGCTACGACGACGCCGGCCGTGGCCTCAACCACCACAGCGGCAGCAAGCACAAGCTCGACGCAAGCTGATCGCAAGCCAATCTACAAACAGGGCAGAACGCCAGTTTACAAGCAAGAGGCCTTAAAACCGACGCAGAAATCAGTCGCTGGAACTGGAACCAAGTTTGGTGCATTCTCCGCGGACAACGAACCGAGCGTGTACTCGTTCGACAATGAGGACAGCTTCGTACCGATGGCTACGCCCTTTCGGCGACACAGCCGACGGGAGAGTTGCAACTCATCGGCGCGAGATGAAGCACAGACGTCAGAAGTGCCTACCGGGGGGAAGGGCAAGGGTGACGAGGAAAAGGCCGGTTCGAGTAACACGTTCCAGAAGCCAACGAGCTTAAGCACTCCGACAAAGGGTGGCGTTCAACCGGCGGTTAGCTTGACGTTGAGTCCGGACGAGGGCGCCAAGACGGCTGCGATTACGGTTCCCTTGGACGAGGAGTCGCGCAAGGTGGAGGAAAAAGAAGAGAAGAAAGAGGGCGAAGATTCGGACGAGGAAGGTCACACGTTTTACATTCCGTTGCAGGGTCCTAATGCGGCAAGTTCTAGTGGCAAATCGGATCAGCTCATTCAGGGAGTGGCCGTCAAGTTGGGCACGGAGGGACCGGAAGGACCTAATCAGCGCGTAATAATGCACGCCAAGCTGGTGACGAAAGCACAAATGGGATCGAACACGACACCGATCCCGGAATCGATGAACGTACAAGAGCTGGTGAAGAGTCTGATGGCGGCAGGTCCAAGCATGAGCAAGGATGGCATTTCCAAAATGGTGCCCGTAGGAACGGTTCAACCCAGGTTCAAGTCGAGCGAAACAAAGGAGAAATCTCCTGCGCCGCCACCAACTCCAGCTCCGGAGGATGCACGAGGAGGTCTCTCGCGAATCAACTCCAACTCTTCGCTGAACTCTTCCCAGCGGTCCAAGCCGAACAAGGCCAAAGCCAAGTTGGACACGGCAGTGCAGCCGGACAACAATACGGCCTTCCCTCGGCGGGACGATCCGGCACAGATGGTTGAGGCACCGGTTTTTAAACCGAACGACAaagagttcagcgaccccatcGAGTACATCGAGCGAATTGCTCCGGTGGCGGCCCGATTTGGCATCTGTCGGATTATTCCGCCGGCCAGTTTCAAGCCGGAATGTCGGATAACGGACGATATGCGCTTCATGGCGTACAACCAGTACGTGCACAAAATGCTTCACCGGTGGGGACCGAGTGCCAAAGAGTACGCTGCCATCAAGAAGTATCTGGCGACGCAGAGCATCAATCTGCAAAGTCCACCGTTGATCGGCGGCATGGAGGTAGATCTTCCCCGGCTTTATCACACCGTACAGGAGCTTGGAGGGTTGAAGGAGGTCATCGAGAAGAAAAAGTGGGCCCGGGTTTCCGAAGATATGTGCTTCCCGAAGTCGGCCCACGATCGCGTCTCCAAGCTGGACGACATCTACTGTAAATATCTGCTCCCGTACGATACGCTTTCGCCGGCCGAACGGCAAAAACTGTTTGACGAAGTGGAAGCAGACTGGGCCAAGCGGGAGGCGAAGGCACGTCGGAACGCGGACAAGTGTGTGAGCTCGGAGACTCGCAACAGCGAAGATTCCGACGAGGATGAAGAGGATTCCAATGAGGACGAAGAGGACGACGAGTTCTCGATGGAGTGCATCATGAAGGGACGCACCATGCCGTTGAATCAGTTCTTCCGGATAGCGCGCAACACGATGGCCCTGTGGTTTAAGAATTCCGAACCAACCGTGGCGGAAATCGAAAGCGAATACTGGCGCCACGTGGCCGTTCGCGATAGCCACGTTTGTGTCCACTCTGGCTCGATCGATTCCAGCGCGTACGGGTTCGGATTTCCCGCACCCAAAGTAAAAGGTTCCTCTTGTGCCAAACATCCGTGGAACCTGAAAGTCCTCACCAACAATAGCAGCTCGATTCTTCGCTCGCTCGGTCCGGTCATGGGCATCACCATTCCAACACTCCACGTGGGAATGCTGTTCAGCGCTTGCTGCTGGTATCGCGACCCGCACGGTCTCCCCTGGATCGAGTACCTCCACACGGGAGCCAACAAAATCTGGTACGGCGTTCCGGACGACCAAAACTCCAACTTCCGCTCGGCCTTAACGTCGCTCGTCCCGACCCATTGCCAAAACAAAACCATCTGGCTGCCCTGCGACACGGCAATGGTTCCGCCGCACATGCTGACCGATCGGAACGTGTCGCTGTGCCGAACCGAGCAACAGCCCGGCCAGTTTGTGGTTGTGTTCCCGCGCGCCTACACGTCCAGCCTGTGCACCGGGTACGCCGTCTCCGAGAGTGTCTACTTTGCCTCCAGCTCGTGGCTTGGGACGGCCAAGGAGGACTTTAGGGACATTCGCGAAAGCTGTGAACCTACCATGTTCTCCGTCGAGCAGCTCGTGTTTGCCATCGCGAACGATCAGCGCAGCAACCACGACACGCTCGTGCAGGTGCTGCCGATGATCAGCGACATCTACGACAAGGAAAAGGAGCAGCGAGAAGTTATCAAGAACCACGGCGTCAACAAGTCCGAGAAGATCGAATCGAAGAAGAAGACCGCCTCGCTGGAGGAGTTCGAGTGTGACATTTGCCGCGCGAACCTGTATCTGTCGCTCGTACGCGTCAAGATcaccggcgacgacgacgaaacgCTGGACGAGGACGAGCGGATCTACTGTCTGAAGCATGCGATCAAGTTCCTGTCGGACAGCCGGCTGCCGGCCAAGTTTTGCAAGCTCGCCTGCACGTACTCGCTGGACGATATCGAGGAGCTGCTGCGCAAGCTGCAGGACCGGATAGCCAACAAGAAGACGACCAAGGGGGCggccggcggcggcggcggaagCAGTgccggtggtggtggcggcggtggCGGTGGACGCGGTAAGTCCTCGCTACATCTGGCCTCCACGTCGTCGCAGTCTTCTTCGTCATATCAAGCGCCTAGTCACAGTAAGTACGCCGGAATGGCGACGATGCTGAAataa
Protein Sequence: MVVSKDGKRRRKVGSAAAASTNANAAGSGSSPAGVTPSGGGAGTRSGGGGGGSGAAAAAAVSPAARDSPERDLSPPEVPKRPKVQAQRKFAQGQGAASTSAYLNFAANPSNSSKDAQNRSADAGHVPELLPNMRPNTEDFLTFLCFRGTNVLPPSLDFFNTASQQQSASGSAPKPVPSTSATASSATTVPQQAGTSAKKAPEVSPPETAKKEENGSTDKKVEQPEKPAFMPFAVRKRAEQHPENRRVQTVQALRKKYHEQRMAKLRVTAYNKQTRGGNVKDKAEAEDDEADVEDLQATESPRKDSAKKEKVTPAKKKVVTTKKNAKKTAKGAKNENVQDLIDIKVVLNKDDVEMKNVSNETKKEPKKEVAASKTPAKGAKRKSLNSEDNEKRTTRLSALRSPQPNTSTVDVEPPKPKEEVAEAPAVLDFSSDDDEPLLKRAAAKKKATARKASAKKGRKSEPIPEKAPEELPEKKARRSESVSRKSDVSSKKSDTPIVKSTPPSRKAPRGRKKKEEDSPPAPEEATPEAPAPPVVVEEPAEEVVKSPPKSTPKKGGAAAARKKKVEPTTSPVAAPEVEEKKMKKTPEPPPEVSARPSRKTKEAATLYMELIGRKFNHDDKSDDDASSLDSLELPNVRRLEQMENELKANAGKKDEKGSARKGRQKKTPQEVVDNSKPVEAQESKPVEKSFSDSDEEPLASKFQRKKQQIRQKLKGKAKKSSPAKKTPTKSSPVKEAEREVEPKSEEKPSEVVANSAEPPVEQLPSPVPKPVTPAKSLKLQATPPPKTSSPKVSTPHTQAVVPLPLISPDVIRSPGTDDRINKSHDNTFQSTTVEPSPVKQPTSQAQPFIRTVKQVPAAEAPEKPAVPAVPEIPFNRNVKNDFNLDESDFLKGFDQTSPTSPVAPKSNSLLGNLLPSKEESEKIFGIASVSLAQSSGPLDTKCTLGKCGSVHKPPLGPPVLTESLLGGHLSPRDRRKTKVNMTHEQIQKWIDETSWSPVPDDLDADLKILETPKTPTPTPTSSAWEKLVGESKSEPAAEAPSPTIQPKKEETKPPTPQPSGSGSRGPTLKAKPVAVKPEKEVPKEPVATPEPPKTPVAEKKPPVDEIKEEEKVKTSPKLRTPSPLKKETKKPEPAAVNATTTPAVASTTTAAASTSSTQADRKPIYKQGRTPVYKQEALKPTQKSVAGTGTKFGAFSADNEPSVYSFDNEDSFVPMATPFRRHSRRESCNSSARDEAQTSEVPTGGKGKGDEEKAGSSNTFQKPTSLSTPTKGGVQPAVSLTLSPDEGAKTAAITVPLDEESRKVEEKEEKKEGEDSDEEGHTFYIPLQGPNAASSSGKSDQLIQGVAVKLGTEGPEGPNQRVIMHAKLVTKAQMGSNTTPIPESMNVQELVKSLMAAGPSMSKDGISKMVPVGTVQPRFKSSETKEKSPAPPPTPAPEDARGGLSRINSNSSLNSSQRSKPNKAKAKLDTAVQPDNNTAFPRRDDPAQMVEAPVFKPNDKEFSDPIEYIERIAPVAARFGICRIIPPASFKPECRITDDMRFMAYNQYVHKMLHRWGPSAKEYAAIKKYLATQSINLQSPPLIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVSEDMCFPKSAHDRVSKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADKCVSSETRNSEDSDEDEEDSNEDEEDDEFSMECIMKGRTMPLNQFFRIARNTMALWFKNSEPTVAEIESEYWRHVAVRDSHVCVHSGSIDSSAYGFGFPAPKVKGSSCAKHPWNLKVLTNNSSSILRSLGPVMGITIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGANKIWYGVPDDQNSNFRSALTSLVPTHCQNKTIWLPCDTAMVPPHMLTDRNVSLCRTEQQPGQFVVVFPRAYTSSLCTGYAVSESVYFASSSWLGTAKEDFRDIRESCEPTMFSVEQLVFAIANDQRSNHDTLVQVLPMISDIYDKEKEQREVIKNHGVNKSEKIESKKKTASLEEFECDICRANLYLSLVRVKITGDDDETLDEDERIYCLKHAIKFLSDSRLPAKFCKLACTYSLDDIEELLRKLQDRIANKKTTKGAAGGGGGSSAGGGGGGGGGRGKSSLHLASTSSQSSSSYQAPSHSKYAGMATMLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400336;
90% Identity: iTF_00400336;
80% Identity: -