Cpip014996.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- JARID2
- Assembly
- GCA_016801865.2
- Location
- NC:88946484-88964997[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-21 1.8e-18 67.2 0.0 6 89 1561 1642 1556 1642 0.93
Sequence Information
- Coding Sequence
- atggttGTATCGAAGGATGGCAAGCGGCGACGGAAAGTTGGTTCCGCGGCGGCGGCTAGCACCAACGCGAACGCTGCCGGTTCCGGATCGTCACCGGCGGGTGTGACTGCGTCTGTTGGGGGAGCCGGAACGcgcagtggtggtggtggtggagggTCTGGTGCGGCTGCTGCAGCCACGGTGTCGCCCGCCGCCAGAGATAGTCCCGAGAGGGACCTTTCTCCGCCGGAGGTGCCCAAAAGACCAAAAGTGCAAGCACAGCGCAAGTTCGCCCAGGGCCAGGGAGCCGCCTCCACATCGGCCTATCTGAACTTTGCCGCCAATCCATCAAACTCATCAAAGGATGCACAAAACCGATCGGCCGACGCCGGCCACGTTCCGGAGCTGCTGCCCAACATGCGCCCAAACACCGAGGATTTCCTCACGTTTCTGTGCTTTCGCGGCACGAACGTGCTTCCGCCCAGTTTGGACTTTTTCAACACGGCCAGCCAACAGCAATCGGCGTCCGGATCCACGGCCAAGCCGGTCCCGTCGACATCTGCCACGGGGCCGTCTTCAACGACGGTACCACAACAAGCTGGTACATCTGCTAAAAAGGCACCTGAGGTTTCTCCGCCTGAAACGGCTAAAAAGGAGGAAAATGGCTCAGCGGACAAGAAAGTGGAACAACCGGAGAAGCCAGCATTTATGCCGTTTGCCGTGCGGAAGCGTGCCGAGCAACATCCGGAAAATCGGCGGGTGCAAACGGTGCAAGCTCTGCGGAAGAAGTACCACGAACAGCGAATGGCCAAGTTACGTGTAACGGCGTACAATAAACAGACGCGAGGTGGGAATGTCAAGGACAAGGCTGAGGATGACGAGGCAGACGTGGAAGATCCTCAAGAGGTTGAAAGTACTAGGAAAGATTCGGCGAAGAAAGAGAAGGTAACACCGGCGAAGAAGAAGGTGGTGGCGACTAAAAAGAATGCCAAGAAGACTGCAAAAGGCGCTAAGAATGAAAACGTACAGGATTTGATTGATATTAAGGTAGTTTTGAACAAGGATGATGTTGAAATGAAGAACgtatcaaatgaaactaaaaaggAGCAGAAAAAAGAAGTTGCAGCTCCAAAAACTCCAGCCAAGGGAGCTAAAAGGAAATCGTTGAACACGGAAGACAACGAAAAACGTACTACGAGACTGTCGGCACTACGGAGTCCGCAACCGAACACTTCAACGGTGGATGTGGAAACGCCAAAGTCGAAAGAAGAAGTCGCCGAGGCTCCCGCTGTACTGGACTTCTCCTCCGATGACGACGAGCCACTTCTCAAGAGGGCGGCAGCCAAAAAGAAGGCCACGGCGCGCAAAGCAACCGCTAAAAAGGGTCGCAAatcggaaccgattccggaaaaagCACCCGAAGAACTTCCGGAGAAGAAAGCGCGTCGTTCGGAATCGGTCAGCCGGAAGTCCGACGTCAGTTCGAAAAAGTCCGACACGCCAATCGTCAAAAGCACACCACCAACGCGAAAACCTCCCCGGgggaagaaaaagaaagaagagGACTCACCTCCGGCACCGGAAGAAGCTACGCCCAAGGCTCCCACACCACCCGTCGTTGTCGAAGAGCCGGCTGAGGAGGTCGTCAAGTCGCCGCCCAAAACTACTCCGAAGAAGGGTGGTGGTGCTGCTGCGAGGAAGAAAAAGGTTGAACCGACGACCTCTCCGGTGGCGGCACCCGAAGTTGAGGAGAAAAAGGTGAAGAAAACTCCGGAACCACCACCGGAGGTGAGTGCTCGACCCAGCCGAAAAACAAAAGAGGCAGCTACGCTTTACATGGAGTTGATTGGGCGTAAGTTTAATCACGACGATAAATCCGACGATGACGCATCATCGCTGGATAGCTTGGAGTTGCCAAACGTGCgcaggttggagcagatggagAATGAGCTCAAAGCGAACGCTGGAAAGAAGGATGAAAAAGGCTCCGCAAGGAAAGGTCGCCAAAAGAAGGACCCGCTAGAGGTTGTGGACAATAGTAAGCCCGTGGAAGCACAAGAATCTAAACCCGTTGAGAAGAGTTTCAGTGATTCCGATGAGGAACCGTTGGCTTCCAAGTTTCAACGAAAGAAGCAACAAATTCGACAAAAGCTGAAAGGAAAAGCGAAAAAAGCTTCGCCGGCGAAGAAAACGCCAACGAAATCGAGTCCAGTAAAGGAAGCTGAACGTGAGGTTGAGCCAAAATCAGAGGAGAAACCTTCGGAAGTTGTAGCCAATAGCGCCGAACCGCCCGTGGAACGATTACCGTCCCCTGCCCCGAAACCTGTAACACCAGCCAAATCTCCTCCGAAGTTACAGGCCACGCCTCCGCCGAAAACGTCCAGTCCCAAGGTTTCAACGCCACACACGCAAGCAGTGGTTCCACCTCCGTTGATCAGTCCGGACGTGATCCGATCTCCCGCAACCGATGACCTTATCACCAAATCACACGATAACACATTCCAGTCCACGACGGTAGAGCCGAGTCCCGTTAAGCAGCCAACGTCCCAAGCGCAGCCATTTATTCGTACGGTCAAGCAAGTTCCCGCTGCGGAAACTCCGGAAAAGCCAGCGGTCCCAGCCGTACCGGAAATACCCTTCAATCGCAATGTGAAGAACGACTTCAACCTGGACGAGTCGGACTTTCTCAAAGGGTTCGATCAAACATCTCCGACCTCGCCAGTTGCTCCCAAGTCGAACTCGCTGCTTGGTAACCTTCTGCCCAGCAAGGAAGAATCCGAGAAAATCTTTGGAATTGCCAGCGTCAGTCTGGCGCAAAGTTCCGGTCCGTTGGACACCAAGTGCACCTTAGGCAAGTGTGGCTCCGTTCACAAGCCTCCGCTGGGACCACCCGTGCTGACGGAATCCCTGCTCGGCGGCCACCTATCGCCACGCGATCGGCGGAAAACCAAGGTCAACATGACCCACGAACAGATCCAAAAGTGGATCGATGAAACTTCGTGGTCGCCGGTTCCCGACGATCTGGACGCGGATTTGAAAATTCTGGAAACGCCcaaaactccaactccaacgcCGACATCTAGCGCATGGGAGAAATTGGTGGGAGAAAGTAAGTCGGAACCGGTCGCGGAAGCGCCCTCCCCGACGATACAACCCAAAAAAGAGGAAACAAAACCCCCAACGCCACAACCCAGCGGCTCTGGTTCGCGAGGACCAACGCTCAAGGCCAAACCCGTCGCGGTAAAGCCGGAAAAGGAAGCCCCTAAAGAACCGGTCGCGACACCGGAACCGCCAAAGACACCGGTCGCCGAGAAAAAGACGCCCGTGGACGAGATCAAAGAGGAAGAAAAGGTCAAAACGTCCCCGAAGCTCCGCACACCTTCACCGCTGAAGAAGGAAACCAAGAAGCAGGAACCGGCGGCTGCGAATGCTACGACGACGCCCGCCGCAACCACCACAGCGGCAGCAGGCACAAGCTCGACGCAAGCCGATCGCAAGCCAATCTACAAACAGGGCAGAACGCCAGTTTACAAGCAAGAGGCCTTAAAACCGACGCAGAAATCAGCCGCTGGAACGGGAACCAAGTTTGGTGCATTCTCCGCGGACAACGAACCGAGCGTGTACTCGTTCGACAATGAGGACAGCTTCGTGCCGATGGCTACGCCGTTTCGGCGACACAGCCGACGCGAGAGTTGCAACTCTTCGGCGCGGGATGAGGCACAGACGTCGGAAGTGCCTACCGGGGGGAAGGGCAAGGGTGACGAGGAAAAGGCCGGTTCGAGCAGCACGTTCCAGAAGCCAACGAGCTTAAGCACTCCGACAAAGGGTGGGGTTCAACCGGCGGTTAGCTTGACGTTGAGTCCGGACGAGGGCGCCAAGACGGCGGCGATTACGGTTCCTTTGGACGAGGAGTCGCGGAAGGTGGAGGAAAAAGAAGAGAAGAAAGAGGGTGAGGGTGATTCGGACGAGGAAGGTCACACGTTTTACATTCCGTTGCAGGGTCCGAATGCGGCAAGTTCGAGTGGCAAATCGGACCAGCTCATTCAGGGGGTGGCCGTCAAGTTGGGCACGGAGGGACCGGAAGGACCCAATCAGCGCGTAATAATGCACGCCAAGCTGGTGACGAAAGCACAAATGGGATCGAATACGACGCCGATTCCGGAATCGATGAACGTACAAGAGCTGGTGAAGAGTCTGATGGCGGCAGGTCCAAGCATGAGCAAGGACGGCATTTCCAAAATGGTCCCTGTGGGAACGGTGCAGCCACGGTTCAAGTCGAGCGAAACGAAGGAGAAATCTCCTGCGCCGCCACCAACGCCTGCCCCGGAGGATGCACGAGGAGGTCTGTCGCGAATCAACTCCAACTCTTCGCTGAACTCTTCCCAGCGGTCCAAGCCGAACAAGGCCAAAGCCAAGCTGGACACGGCAGTGCAGCCGGACAACAATACGGCCTTCCCTCGGCGGGACGATCCGGCACAGATGGTTGAGGCACCGGTATTCAAACCAAACGACAaggagttcagcgaccccatcGAGTACATCGAGCGAATTGCTCCGGTGGCGGCACGATTTGGCATCTGTCGGATTATTCCGCCGGCCAGTTTCAAGCCGGAATGTCGGATAACGGACGATATGCGCTTCATGGCGTACAACCAGTACGTGCACAAAATGCTTCACCGGTGGGGACCGAGTGCCAAAGAGTACGCCGCCATCAAGAAGTATCTGGCGACGCAGAGCATCAATCTGCAAAGTCCACCGTTGATCGGCGGCATGGAGGTAGATCTTCCTCGGCTTTATCACACCGTACAGGAGCTTGGAGGGTTGAAGGAGGTCATCGAGAAGAAAAAGTGGGCCCGCGTTTCCGAAGATATGTGCTTCCCGAAGTCGGCCCACGATCGCGTCTCCAAGCTGGACGACATCTACTGTAAATATCTGCTTCCGTACGATACGCTCTCGCCGGCCGAACGGCAAAAACTGTTTGACGAGGTGGAAGCAGACTGGGCCAAGCGGGAGGCGAAGGCACGCCGGAACGCGGACAAGTGTGTCAGCTCGGAGACTCGCAACAGCGAAGATTCCGACGAGGATGAAGAGGATTCCAACGAGGACGAAGAGGACGACGAGTTCTCGATGGAGTGCATCATGAAGGGACGCACCATGCCGTTGAATCAATTCTTCCGGATAGCGCGCAACACGATGGCCCTGTGGTTCAAGAATTCCGAACCAACCGTGGCGGAAATCGAAAGCGAATACTGGCGCCACGTGGCCGTTCGCGATAGCCACGTGTGTGTCCACTCTGGCTCGATCGATTCTAGCGCGTACGGGTTCGGATTTCCCGCGCCCAAAGTAAAAGGTTCCTCCTGCGCCAAACATCCGTGGAACCTGAAAGTCCTCACCAACAATAGCAGCTCGATTCTTCGCTCGCTCGGTCCGGTCATGGGCATCACCATTCCAACACTCCACGTGGGAATGCTGTTCAGCGCTTGCTGCTGGTATCGCGACCCGCACGGTCTCCCCTGGATCGAGTACCTCCACACGGGAGCCAACAAAATCTGGTACGGCGTTCCGGACGACCAAAACTCCAACTTCCGCTCGGCCTTAACGTCGCTCGTGCCGACCCATTGCCAAAACAAAACCATCTGGCTGCCCTGCGACACGGCAATGGTTCCGCCGCACATGCTGACCGACCGGAACGTGTCGCTGTGCCGAACCGAGCAACAGCCCGGCCAGTTTGTGGTCGTGTTCCCGCGCGCCTACACGTCCAGCCTGTGCACCGGGTACGCCGTCTCCGAGAGCGTCTACTTTGCGTCCAGCTCGTGGCTTGGGACGGCCAAGGAGGACTTTAGGGACATTCGCGAAAGCTGTGAGCCTACCATGTTCTCCGTCGAGCAGCTCGTGTTTGCCATCGCGAACGATCAGCGCAGCAACCACGACACGCTCGTGCAGGTGCTGCCGATGATCAGCGACATCTACGACAAGGAAAAGGAGCAGCGAGAAGTTATCAAGAACCACGGCGTCAACAAGTCCGAGAAGATCGAATCGAAGAAGAAGACCGCCTCGCTGGAGGAGTTCGAGTGTGACATTTGCCGCGCGAACCTGTATCTGTCGCTCGTACGCGTCAAGATcaccggcgacgacgacgaaacgCTGGACGAGGACGAGCGGATCTACTGTCTGAAGCATGCGATCAAGTTCCTGTCGGACAGCCGGCTGCCGGCCAAGTTTTGCAAGCTCGCCTGCACGTACTCGCTGGACGATATCGAGGAGCTGCTGCGCAAGCTGCAGGACCGGATAGCCAACAAGAAGACGACCAAGGGGGCGGCCGGCGGCGGTGGCGGAAGCAGTGCCGGGGGTGGTGGCGGCGGACGCGGTAAGTCTTCGCTACATCTGGCCTCCACGTCGTCGCAGTCTTCTTCGTCATATCAAGCGCCTAGTCACAGTAAGTACGCCGGAATGGCGACGATGCTGAAataa
- Protein Sequence
- MVVSKDGKRRRKVGSAAAASTNANAAGSGSSPAGVTASVGGAGTRSGGGGGGSGAAAAATVSPAARDSPERDLSPPEVPKRPKVQAQRKFAQGQGAASTSAYLNFAANPSNSSKDAQNRSADAGHVPELLPNMRPNTEDFLTFLCFRGTNVLPPSLDFFNTASQQQSASGSTAKPVPSTSATGPSSTTVPQQAGTSAKKAPEVSPPETAKKEENGSADKKVEQPEKPAFMPFAVRKRAEQHPENRRVQTVQALRKKYHEQRMAKLRVTAYNKQTRGGNVKDKAEDDEADVEDPQEVESTRKDSAKKEKVTPAKKKVVATKKNAKKTAKGAKNENVQDLIDIKVVLNKDDVEMKNVSNETKKEQKKEVAAPKTPAKGAKRKSLNTEDNEKRTTRLSALRSPQPNTSTVDVETPKSKEEVAEAPAVLDFSSDDDEPLLKRAAAKKKATARKATAKKGRKSEPIPEKAPEELPEKKARRSESVSRKSDVSSKKSDTPIVKSTPPTRKPPRGKKKKEEDSPPAPEEATPKAPTPPVVVEEPAEEVVKSPPKTTPKKGGGAAARKKKVEPTTSPVAAPEVEEKKVKKTPEPPPEVSARPSRKTKEAATLYMELIGRKFNHDDKSDDDASSLDSLELPNVRRLEQMENELKANAGKKDEKGSARKGRQKKDPLEVVDNSKPVEAQESKPVEKSFSDSDEEPLASKFQRKKQQIRQKLKGKAKKASPAKKTPTKSSPVKEAEREVEPKSEEKPSEVVANSAEPPVERLPSPAPKPVTPAKSPPKLQATPPPKTSSPKVSTPHTQAVVPPPLISPDVIRSPATDDLITKSHDNTFQSTTVEPSPVKQPTSQAQPFIRTVKQVPAAETPEKPAVPAVPEIPFNRNVKNDFNLDESDFLKGFDQTSPTSPVAPKSNSLLGNLLPSKEESEKIFGIASVSLAQSSGPLDTKCTLGKCGSVHKPPLGPPVLTESLLGGHLSPRDRRKTKVNMTHEQIQKWIDETSWSPVPDDLDADLKILETPKTPTPTPTSSAWEKLVGESKSEPVAEAPSPTIQPKKEETKPPTPQPSGSGSRGPTLKAKPVAVKPEKEAPKEPVATPEPPKTPVAEKKTPVDEIKEEEKVKTSPKLRTPSPLKKETKKQEPAAANATTTPAATTTAAAGTSSTQADRKPIYKQGRTPVYKQEALKPTQKSAAGTGTKFGAFSADNEPSVYSFDNEDSFVPMATPFRRHSRRESCNSSARDEAQTSEVPTGGKGKGDEEKAGSSSTFQKPTSLSTPTKGGVQPAVSLTLSPDEGAKTAAITVPLDEESRKVEEKEEKKEGEGDSDEEGHTFYIPLQGPNAASSSGKSDQLIQGVAVKLGTEGPEGPNQRVIMHAKLVTKAQMGSNTTPIPESMNVQELVKSLMAAGPSMSKDGISKMVPVGTVQPRFKSSETKEKSPAPPPTPAPEDARGGLSRINSNSSLNSSQRSKPNKAKAKLDTAVQPDNNTAFPRRDDPAQMVEAPVFKPNDKEFSDPIEYIERIAPVAARFGICRIIPPASFKPECRITDDMRFMAYNQYVHKMLHRWGPSAKEYAAIKKYLATQSINLQSPPLIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVSEDMCFPKSAHDRVSKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADKCVSSETRNSEDSDEDEEDSNEDEEDDEFSMECIMKGRTMPLNQFFRIARNTMALWFKNSEPTVAEIESEYWRHVAVRDSHVCVHSGSIDSSAYGFGFPAPKVKGSSCAKHPWNLKVLTNNSSSILRSLGPVMGITIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGANKIWYGVPDDQNSNFRSALTSLVPTHCQNKTIWLPCDTAMVPPHMLTDRNVSLCRTEQQPGQFVVVFPRAYTSSLCTGYAVSESVYFASSSWLGTAKEDFRDIRESCEPTMFSVEQLVFAIANDQRSNHDTLVQVLPMISDIYDKEKEQREVIKNHGVNKSEKIESKKKTASLEEFECDICRANLYLSLVRVKITGDDDETLDEDERIYCLKHAIKFLSDSRLPAKFCKLACTYSLDDIEELLRKLQDRIANKKTTKGAAGGGGGSSAGGGGGGRGKSSLHLASTSSQSSSSYQAPSHSKYAGMATMLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401494;
- 90% Identity
- iTF_00401494;
- 80% Identity
- -