Cpip002923.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- dmd-4
- Assembly
- GCA_016801865.2
- Location
- NC:85217704-85266471[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9 5.3e+03 -2.1 0.2 28 36 20 28 19 31 0.80 2 3 2.1e-24 6.2e-21 74.5 10.4 1 47 59 105 59 105 0.98 3 3 0.19 5.4e+02 1.1 0.3 3 12 300 309 298 310 0.86
Sequence Information
- Coding Sequence
- ATGTTGTCTGTTAGTAGCTTTCTCAAGTGTTCCGGAAACAGTGAAAGGAAGGATATTGACTGCAGCAGCGATACATGCGACGGAACCTCCAGCACCGCCGGTAGTGCTTCCAGGACCAATGTAGTGAGTTCAAGTTGTGCCGGGAAGACAAGCAGTAGTGTACTGCAGACATCAAGAATTCCAAAATGTGCGCGCTGTAGGAACCATGGAGTGATCTCCGGACTTCGAGGGCATAAGAAGCACTGTACTTATCGCAACTGTCGGTGCCCTAAATGTGAGCTGATCTTATCGCGTCAAAAAATAATGGCGGCACAGGTGGCACTTAAAAGACAGCAAGCTGTGGAAGATGCTATAGCACTTCGTTTAGCTTCAACAGAAATGGGAACTCAACTTGAAGCGCTGCCACCTGGGAAAATATACGGCATGACTGTCACTGAACCTTGCTCTTCGCCAAAGCTGAACTCATCTTCCCCAATAGATATTACTTCCTCAACGTCGCCGGATGCTACACAGGAGAAGGATCCTATCGATAACTCTCCAAACGGTAAAACATCTAATCTACCCAACAGTGTCCCAGTATCTCAAAATGCCCTGGATATGCTATCTCAACTTTTTCCCCATCGGAAAAGGTCTGTTCTTGAACTGATTTTAAAGCGATGCGACTCTGACCTGTTAAGGGCAATTGAACAGTGCAGCAAAAGCCCACCTACAAGTGCATTCAAACCACCAACATCTTCTCACAGCTCTCTAATATCTCACCATCCGATACCACTCACATCATCAAGTCCACCAAGCTACACATCATTGATCGCTTATCCAAAATGGTTGCTTCCAACTATGTCTATCCCAATTCCCATGgggcatattgccccaaatctaGCCCCACGATGTACCCTTCCGAATTGTGTCATGTGCTTACATCATCCGGTATAG
- Protein Sequence
- MLSVSSFLKCSGNSERKDIDCSSDTCDGTSSTAGSASRTNVVSSSCAGKTSSSVLQTSRIPKCARCRNHGVISGLRGHKKHCTYRNCRCPKCELILSRQKIMAAQVALKRQQAVEDAIALRLASTEMGTQLEALPPGKIYGMTVTEPCSSPKLNSSSPIDITSSTSPDATQEKDPIDNSPNGKTSNLPNSVPVSQNALDMLSQLFPHRKRSVLELILKRCDSDLLRAIEQCSKSPPTSAFKPPTSSHSSLISHHPIPLTSSSPPSYTSLIAYPKWLLPTMSIPIPMGHIAPNLAPRCTLPNCVMCLHHPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401727;
- 90% Identity
- iTF_00401727;
- 80% Identity
- -