Cpip016340.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- -
- Assembly
- GCA_016801865.2
- Location
- NC:129435245-129436664[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-09 4.3e-06 27.5 0.1 2 43 47 88 46 156 0.81
Sequence Information
- Coding Sequence
- ATGTTAACAAACATTTTGGTAGTGCCGGTGACAGGAGTCGGACGCGGACACCTTTGTGAGccaaaacagcagcagcggaaggtGGGTGGCGCCGGTGCGGGGCGAGGTCGGGGGGAAAGTTGGTTTTCGAAAAAGGACAAGGCTAGCCTCCTGCAGGAcctgcagctgtttcacgaccggagttggacgcaGTTTATGCGGTTGCCGAAGATCGGAGGTCGGTATGTGGatttgcaccggttgtattcggtggtggtaGCCAGGTGGACGAAATTGAAGTTGAAGCAGATTTACATCCGCTTTTCGAACATGTACGATAAGGTAAATTttaacgAAGACCAGTTTACACCATTTCTGAATGGACCGTCTGTACGAAAGCCGCAAGTCCTGGAGTTGACGTACTCGGATTACTGCCAGAGGTTGGAGCGAGATCCGACGAATTTGATCAAGAACATCTACctggaataccgaagaagtcaccgTGATCTGGAACTATCCGTTCAGGCGCTTTACTTCCCAgccggaaaacgtcgacttcccttcccaaatcaacaacaaatggccaactcctccaagcctgtcctgatgatggccggcaacgagaccACCCTGTTCTCTACAACGCTGTCGCGCTCCAAAATGAAGGCCGCGATGTTGCTGCCCAACAAAACGTCCATCCGTAACCTGCTCAGCATGGGGCCTTCGGACGTGACAGGTGGCGTACCGTAA
- Protein Sequence
- MLTNILVVPVTGVGRGHLCEPKQQQRKVGGAGAGRGRGESWFSKKDKASLLQDLQLFHDRSWTQFMRLPKIGGRYVDLHRLYSVVVARWTKLKLKQIYIRFSNMYDKVNFNEDQFTPFLNGPSVRKPQVLELTYSDYCQRLERDPTNLIKNIYLEYRRSHRDLELSVQALYFPAGKRRLPFPNQQQMANSSKPVLMMAGNETTLFSTTLSRSKMKAAMLLPNKTSIRNLLSMGPSDVTGGVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400341;
- 90% Identity
- iTF_00400341;
- 80% Identity
- -