Cpip002245.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- Arid2
- Assembly
- GCA_016801865.2
- Location
- NC:67386850-67392498[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-10 7.1e-07 30.0 0.2 2 43 33 74 32 128 0.84
Sequence Information
- Coding Sequence
- atgtttacgTTTACGTTTGTGGACTGGGTCAGTTGGAAGGTGGGTGGTGCTGGTGCGGGACGAGGTCGGGGGGAAAGTTGGTTTTCGAAAAAGGACAAGGCCGTCTTCCTGCAGGAcctgcagctgtttcacgaccggagttggacgcaGTTTATGCGGTTGCCGAAGATCGGAGGTCGGTATGTGGATTTGCACCagttgtattcggtggtggtggccaggTGGACGAAATTGAAGTTGAAGCAGATTTACATCCGCTTTTCGAACAAGTACgataaagtaaattttaacgaagaacagtttgcaccAGTTCTGGATGGACCGTCTGTACGAATGCCGCAAGTCCTGGAGTTGACATACTCGGATTACTTCCAGAGGTTGGAGCGAGATCCGACGAACCTGATCCAGAACATCTACctggaataccgaagaagtcaccgTGATCGAGAACTATCCGTTCAGGCGCTTTACTTTCCAgccggaaaacgtcgacttcccttcccgaatcaacaaccaatggccaactcctccaagcctgtcctgatgatggccggcaacgagaccACCCTGTTCTCTACAACGCTGTCGCGCTCCAAAATGAAGGCCGCGATGTTGCTGCCCAACGAAACGTCCATCCGTAACCTGCTCAGCATGGGGCCTTCGGacgtgaccggtggcgtaccgtaa
- Protein Sequence
- MFTFTFVDWVSWKVGGAGAGRGRGESWFSKKDKAVFLQDLQLFHDRSWTQFMRLPKIGGRYVDLHQLYSVVVARWTKLKLKQIYIRFSNKYDKVNFNEEQFAPVLDGPSVRMPQVLELTYSDYFQRLERDPTNLIQNIYLEYRRSHRDRELSVQALYFPAGKRRLPFPNQQPMANSSKPVLMMAGNETTLFSTTLSRSKMKAAMLLPNETSIRNLLSMGPSDVTGGVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400342; iTF_00400340;
- 90% Identity
- iTF_00400342;
- 80% Identity
- -