Basic Information

Insect: Ctenicera cuprea
Gene Symbol: RREB1
Assembly: GCA_958336395.1
Location: OY284486.1:72082645-72087669[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.21 23 7.3 1.1 3 23 64 84 62 84 0.92

2 16 0.00025 0.028 16.5 0.1 1 23 97 119 97 119 0.98

3 16 1.7e-05 0.0019 20.2 3.9 1 23 125 147 125 147 0.98

4 16 1.6 1.7e+02 4.6 0.0 1 23 230 254 230 254 0.82

5 16 0.0061 0.68 12.1 2.7 2 23 260 282 260 282 0.92

6 16 0.17 20 7.5 0.4 1 20 332 351 332 353 0.95

7 16 0.14 16 7.8 0.1 1 23 494 516 494 516 0.96

8 16 1.6e-05 0.0018 20.3 0.8 1 23 525 547 525 547 0.99

9 16 0.0028 0.31 13.2 2.3 1 23 553 576 553 576 0.97

10 16 0.00057 0.064 15.4 1.4 1 23 1008 1031 1008 1031 0.96

11 16 0.0022 0.24 13.5 0.4 2 23 1280 1301 1279 1301 0.97

12 16 0.25 27 7.1 6.3 1 23 1307 1330 1307 1330 0.97

13 16 0.083 9.2 8.6 1.1 1 20 1358 1378 1358 1379 0.94

14 16 0.084 9.3 8.6 2.4 1 23 1449 1472 1449 1472 0.95

15 16 0.032 3.6 9.8 0.4 3 23 1520 1540 1518 1540 0.93

16 16 0.014 1.6 11.0 7.8 1 23 1546 1568 1546 1568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.21	23	7.3	1.1	3	23	64	84	62	84	0.92
2	16	0.00025	0.028	16.5	0.1	1	23	97	119	97	119	0.98
3	16	1.7e-05	0.0019	20.2	3.9	1	23	125	147	125	147	0.98
4	16	1.6	1.7e+02	4.6	0.0	1	23	230	254	230	254	0.82
5	16	0.0061	0.68	12.1	2.7	2	23	260	282	260	282	0.92
6	16	0.17	20	7.5	0.4	1	20	332	351	332	353	0.95
7	16	0.14	16	7.8	0.1	1	23	494	516	494	516	0.96
8	16	1.6e-05	0.0018	20.3	0.8	1	23	525	547	525	547	0.99
9	16	0.0028	0.31	13.2	2.3	1	23	553	576	553	576	0.97
10	16	0.00057	0.064	15.4	1.4	1	23	1008	1031	1008	1031	0.96
11	16	0.0022	0.24	13.5	0.4	2	23	1280	1301	1279	1301	0.97
12	16	0.25	27	7.1	6.3	1	23	1307	1330	1307	1330	0.97
13	16	0.083	9.2	8.6	1.1	1	20	1358	1378	1358	1379	0.94
14	16	0.084	9.3	8.6	2.4	1	23	1449	1472	1449	1472	0.95
15	16	0.032	3.6	9.8	0.4	3	23	1520	1540	1518	1540	0.93
16	16	0.014	1.6	11.0	7.8	1	23	1546	1568	1546	1568	0.98

Sequence Information

Coding Sequence: ATGGATTTATCGCCAGAGCTAGATTTACACGCCAAAGAAATTATCGTAAACCAAAGTAATCAAAGTGACTCAGGTATATTGTCGGCGACTGGAAATTCCACATTTATGGACATGGACCGCTCAAGTCGTTTCGAAAACGAAGATACAGACAATCGAAGCAACTGCAGTTCTCCAGACCGCAAATATCTCTGCATAATTTGTGAAACTATGCTAACCTCCCAACACGAATTTACTCTACATATCAGATCTCATAATAACGAATCGGAAGTGCAAGATTCTGAAAAAGGCTTCGTATGTCGCATTTGCAGCAAAGTACTGAGTTCAAGTGCTAGCTTAGATCGACATATGTTAATACACAGTGGAGAGAGGCCTTTTATGTGCAAATACTGCGGAGATACATTTACCACCAACGGAAATATGCACCGGCACATGCGAACCCACACTAATAGAACCGAAAATTATGAGTCCGACGGAAGCACCGATAGTGGTGCAAGTAGCGGCTCTAAAACGGTAGAATATAACAACAATAAGATATCATCAAAAACTGATAGCAATAAAAGCACCTTATTAGAACTCAAAACAGGAATGGataataaacgaaaatataGTAATTATGAACCAGAGGAAACTTATAAGCAATCTCGAATCAAATTGAAGGATAACCCGGAACACGTTCAAAGTCAAAATTATAGTTGCCCCGTATGCGATCGGGATGATTTCAATTCAATCGATAACCTAGAAGTGCACTTAGAAGACAATCATCCTGATTATCCTGCAAAATGTAATCATTGCAGTCAAAgctttaacaataacaaacttcTCAACGAACATAAAGGCATGGTTCATTACAACGAAGAAAATAGTAAACACCAAAGAAATTCTGTAGTTGGTTTCAAAGACTTGACGTTTGTGGATTTTTCAAGTCAGAAATTTCCATATATAGCCAAATACGAATGTGAAAAAAATCTACACAAAGTTGCTAGTGGGCTGAAATTTCAATGCGAAAGGTGCTCGCGCGCTTTTCCTTGCGCCAGCTCTCTCGAAATTCATCAGTCAGATTGCATAACTGGTTTAGATTTAtcagtcaaaaataaaaacaattcaagtacaaataaaaacttaaacaatgCCGAAAAAGACATACGAAGAAATGACTTTTTTGCACGACtagatttacaaaataattctcAAGAGAAAACGGAATCACCTCAAACGAATAACGAGAAAGTTTCAAAACTTCCACCAAACCCATTTCAAAGTACAGATAACAACAAAGACTTAGCTGACATACAATCAATAATCTCGATGACGACAAATGGCACACTGCTTCAACAGCTACAAGCAAAAACGATTGATGTAAATTGTACTCTGCGATCAATGTGTACAGAAAATGAACAAGAAATTCAGAAACACGAACCCGAAGAAGAATCCCAAGATTTGTTTGCTGCAGAATTTCGAAAGATGAAACTGAGAGGTGAATTTCCTTGCCGCTTGTGTACTGCCGTGTTTCCAAACCTACGAGCTTTAAAGGGACATAATCGTGCACATTTAAACGGAAACAATAACGGAACTTATAGGTGCAATATGTGTCCTCACTCGTCTATAGACAAAGCAGCTCTTATACGACATATGAGAACTCACAATGGAGATCGACCTTACGAATGTGCACTGTGCAACTATGCGTTTACAACGAAAGCTAACTGCGAAAGACATTTACGAAATAGACATGCTAAAAGTAGCAGGGAAGAAGTCAAAAAATCTATAATCTATCACCCTTCAGAAGACCCAAGTAATGAagaaataagcaaaatgctAGCACGAGACGAAAACAGCAAAGGGAGTGTGTCTCTAAGCACACCTAAAATTATTAGTGAAATAACTCCggaaaaagtgaaaattgtgACGGCGGAAAATTTTATACCTACACCTGATCTTCCAAATCTCTTGCCTGAAAAGTGTGTTAAAGACATTACTAGTCCAGTTTCCATCGGCAGCAGCATGTTAAACATGAAATGTGGTTCTCCATTTAATCTTACCAGGCAGCCATCCGTAAGTAGAATAGATGTGCCCAATATCATTCAAAACGAAAGTTTGAAATCTTTACAAGAACATAACATAGTTATAAGCGAACCGGTACCTTCATATATTCCACCATTCAGTTTCTCgcctaaaattacaaatacatcgaCACCTCAGAAAATAACCCCGAAaattaacgtaaaaaatttagaatctaTGCAATGTACTGAACACGAcgatgaaaataattatacgCAACCAGATGTGCATCCTTTGGAATGCGACGATCAACCTATAGATTTGGTGTTAGATTTAAGTAAAAAGAAGGTGAAATCTAAACCCGAAGAAACACCGAAACCAATTATAGAAGATATTCCTCAAGATTTATCCAAAAAGAGTCCAGAGATCGGATCACCTAACATGAGTGAAATTTTGGCTCGACAACTTCTCAAAAATACCCCAAAAATAGACCCCGCTAGTTTATATGCTTCACAGTTAGCTATTTACAGAAACGGTTTTCCTGGATTGCATGGCTTATCATCGTGGCCATTTTCTCTTAATCCTATGTTATTTCAAACAATTCCTTCTCCGCTGTTTCCTCAGGATCCGCATGAAATCAAAGAACGAATACAAAGACTGCAGTTGTGTGGAGGGGGAATGGTCATGGACAATTTTGCTGAGAGATTGAAAAGCTTTCATCAACAGTCTCTATCCAATGCAAATGTGAATGCatttaacaatttcaaacttAACGATATCAAGCCAGAATTAAACGTTCACGACAACAGTTATACAAATCATAGCTCAGTAAATTCTGAAGAAGTAAAACCACTTTCTTTATCCATAGATCAAAATTTGTctgacaatttaattaaaatgcaaagtcCTTTACCGATTTCCAAATCTGAACCTATGGCTTCGCCCAACTCTGTAAAAATGGTTATTAAGAACGGAGTACTTATGCCGAAGCAAAAACAAAGACGTTATCGTACTGAGAGGCCATTTTCTTGTGAGTACTGTTCAGCTCGATTTACACTAAGGTCTAATATGGAACGGCATATTAAACAACAGCATCCTCAGTTTTGGTCTCAACGGCAAAGATCTAATGTTGGCGGCGGAAATCGGAAAATACAATCCAGCAATGTAAATTCGCGCAATAGTTATTGCAACATAAATATTCCCAATTATGACACACCAAAGAAGCCAAGCTACGATGACACCAAAGACAGTCAAATAtcggaaaaaattaaatacgtcATATTAGCGCAACACTTGAAAGCTGCTCAGAATTACAAGGCCAACAACAAACAAGATCAGAAGATTAAAGAAGAAGATGAAGATTACGAGTTAGTTATAGATGAAAAGGATGAAGGGTTAAATAAGAACGAGGAACAGGATAAAAGCAGCAAACATAGTGACAAGGAAAGTACTTCTAGTTCGTATGGGAACATCTGCAAGACACAAATATTGGAAGACAAACTTAAGCAATTTCAGCCTAAGCAATATACAGAAACCTCAAACACAGACGCCATTGAGTGTTCAAATAACATAGTTAAAAATGAAGATGCCCAAGATTTAGTTCCGGTATCTCGTTTGTTAGACAATGCATCGCAACAGCCgtttaaagaatattttcgGCGAGGAGAAGGGCGTGAAGGTGGTATTAGCGAGGAAGATGAAGAAGGACTTGTTGCTAGCAGCAGCACCAGCGAAGAAAACAACTCCGGAACTGACGAAAATCGGTCAGAATCTGAAACTACAACTACTCAAGCACCTACGAAAAAAAAGTCTGCGTATTCTTTGGCTCCAAACCGAGTGAGCTGTCCCTATTGTCAACGTAAATTTCCATGGACGTCCTCTTTGCGAAGACATGTATTAACACACACTGGacagaaaccttttaaatgtagccaTTGTCCTTTACTGTTTACAACAAAATCAAACTGTGATCGCCATTTGCTTCGAAAACATGGAAATTCTGCTACCGCCATCAACAACGATCTCTCTAGCAATAGTACCAATTATATGATGCGAAATGTTCCAGAACGTCCATTTAAGTGTTCCAGTTGTCCTAGCAGCACATTTTCTACTTATTCGAACCTCAAGAAGCACATAAGTTGCAAACATTCATCGCAAGGTGCACAGAGCGACGACGCTCGCTCTCAGATTTCCACAGGTTATGAAGCTGGAAGTTCAGAGGACGAGAAAATGTCGCAGGGAGAACAGAAAAGCGATTGGGACAAACAAATAACATCTCACAGTAAAACCACCCTTCCAAGTTCTGAAGCAGTGCAAAATCCTCATTTGCAAAACTCCGATTTGCCGTTCAAGTGCCATTTGTGCGATAATTCGTTTGGTGACCGACATGATGCGCTTGAGCACATAAAAGACAGACACACTTCCGAGTACGAATTACTCATGTCCAAGAATGCATTGGATACTAATGCGACTACTCCTGATGAAAACCCAAATCATGATGACAACGAAGAAAACGAAGTTCGAGGAAAGTTTCCAGATTATGCCAACAGAAAAGTAATTTGTGCCTTTTGCATGCGTCGATTCTGGTCGGCGGAAGATTTAAGACGACATATGCGAACACATACCGGAGAGCGGCCTTTTAGTTGTGATATTTGCCATCGTCGATTTACCCTGAAACATAGTATGTTAAGGCATCGTAAAAAACACAACTTAACGTTTGAAAGTGACAATTTAAACAGCGACGAAGACGTAAACAATGCAAATCTAGCTCCAGCATTTGATAAATTTGTTAAAGGTAACAACAATAATCTGGTAAGTAAAACCGACGAATCTGATGGTACAGAAGGTAGTGACTTAATCAGCAATTTATTGGGTATTAGAGATCGCTCTATTATAGACCAAGTCCTGACTGCGTCTGCAGATGATGCTGCCAAGCTTTTGGGAGTTAAAGGGGGCGAGTag
Protein Sequence: MDLSPELDLHAKEIIVNQSNQSDSGILSATGNSTFMDMDRSSRFENEDTDNRSNCSSPDRKYLCIICETMLTSQHEFTLHIRSHNNESEVQDSEKGFVCRICSKVLSSSASLDRHMLIHSGERPFMCKYCGDTFTTNGNMHRHMRTHTNRTENYESDGSTDSGASSGSKTVEYNNNKISSKTDSNKSTLLELKTGMDNKRKYSNYEPEETYKQSRIKLKDNPEHVQSQNYSCPVCDRDDFNSIDNLEVHLEDNHPDYPAKCNHCSQSFNNNKLLNEHKGMVHYNEENSKHQRNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVASGLKFQCERCSRAFPCASSLEIHQSDCITGLDLSVKNKNNSSTNKNLNNAEKDIRRNDFFARLDLQNNSQEKTESPQTNNEKVSKLPPNPFQSTDNNKDLADIQSIISMTTNGTLLQQLQAKTIDVNCTLRSMCTENEQEIQKHEPEEESQDLFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKSSREEVKKSIIYHPSEDPSNEEISKMLARDENSKGSVSLSTPKIISEITPEKVKIVTAENFIPTPDLPNLLPEKCVKDITSPVSIGSSMLNMKCGSPFNLTRQPSVSRIDVPNIIQNESLKSLQEHNIVISEPVPSYIPPFSFSPKITNTSTPQKITPKINVKNLESMQCTEHDDENNYTQPDVHPLECDDQPIDLVLDLSKKKVKSKPEETPKPIIEDIPQDLSKKSPEIGSPNMSEILARQLLKNTPKIDPASLYASQLAIYRNGFPGLHGLSSWPFSLNPMLFQTIPSPLFPQDPHEIKERIQRLQLCGGGMVMDNFAERLKSFHQQSLSNANVNAFNNFKLNDIKPELNVHDNSYTNHSSVNSEEVKPLSLSIDQNLSDNLIKMQSPLPISKSEPMASPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQFWSQRQRSNVGGGNRKIQSSNVNSRNSYCNINIPNYDTPKKPSYDDTKDSQISEKIKYVILAQHLKAAQNYKANNKQDQKIKEEDEDYELVIDEKDEGLNKNEEQDKSSKHSDKESTSSSYGNICKTQILEDKLKQFQPKQYTETSNTDAIECSNNIVKNEDAQDLVPVSRLLDNASQQPFKEYFRRGEGREGGISEEDEEGLVASSSTSEENNSGTDENRSESETTTTQAPTKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATAINNDLSSNSTNYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSSQGAQSDDARSQISTGYEAGSSEDEKMSQGEQKSDWDKQITSHSKTTLPSSEAVQNPHLQNSDLPFKCHLCDNSFGDRHDALEHIKDRHTSEYELLMSKNALDTNATTPDENPNHDDNEENEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNLTFESDNLNSDEDVNNANLAPAFDKFVKGNNNNLVSKTDESDGTEGSDLISNLLGIRDRSIIDQVLTASADDAAKLLGVKGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00789650;
90% Identity: -
80% Identity: -