Basic Information

Insect: Ctenicera cuprea
Gene Symbol: wdn
Assembly: GCA_958336395.1
Location: OY284494.1:40253430-40257391[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0068 0.76 12.0 0.2 2 21 197 216 196 217 0.94

2 10 7.6 8.5e+02 2.4 6.5 1 19 225 243 225 247 0.90

3 10 2.6e-05 0.0029 19.6 1.2 1 23 253 276 253 276 0.97

4 10 5.2e-07 5.8e-05 24.9 0.2 1 23 282 304 282 304 0.98

5 10 7.6e-05 0.0085 18.1 0.2 1 23 312 334 312 334 0.98

6 10 1.6e-06 0.00018 23.4 1.0 1 23 340 362 340 362 0.97

7 10 2.8e-05 0.0031 19.5 4.8 1 23 368 390 368 390 0.95

8 10 0.0015 0.16 14.1 3.1 1 23 396 418 396 418 0.97

9 10 0.0084 0.94 11.7 3.6 1 23 424 446 424 446 0.98

10 10 6.8e-05 0.0076 18.3 2.1 1 23 452 475 452 475 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0068	0.76	12.0	0.2	2	21	197	216	196	217	0.94
2	10	7.6	8.5e+02	2.4	6.5	1	19	225	243	225	247	0.90
3	10	2.6e-05	0.0029	19.6	1.2	1	23	253	276	253	276	0.97
4	10	5.2e-07	5.8e-05	24.9	0.2	1	23	282	304	282	304	0.98
5	10	7.6e-05	0.0085	18.1	0.2	1	23	312	334	312	334	0.98
6	10	1.6e-06	0.00018	23.4	1.0	1	23	340	362	340	362	0.97
7	10	2.8e-05	0.0031	19.5	4.8	1	23	368	390	368	390	0.95
8	10	0.0015	0.16	14.1	3.1	1	23	396	418	396	418	0.97
9	10	0.0084	0.94	11.7	3.6	1	23	424	446	424	446	0.98
10	10	6.8e-05	0.0076	18.3	2.1	1	23	452	475	452	475	0.97

Sequence Information

Coding Sequence: ATGAGGCATTTAGAGCTAACAGAAACGTTACATCGTGACCCTCCAGATAACGAAATTAAAGAGGAAGACTTTGAAACCATAGATGAAATAAAAGAGGAATTACCAGggttaaatttaatagattgtGAAAATCTAATAAAGAACGACTTTCACAGTGATGATGAAAGTCTAGACCTAGAGCTACCGCTTAGTCCTACCAGTGCTTTAAGTGAAAGTTACGAATTACCTTCCAAACAAAATATGACCCCACGGAGAAACAGACGTAAAGCCCTACAGCCACAAAAGGCCGTACATTCTGAGGTTAGTCAATCCGGTTCCTTGGGAAATAGCTCGGAATGTTCCCAAGATGCttcagaaaataatttcttaaaccTCATGGGGCACGATAGTAGTATGCTCAGTTTAAGAACTGATTTGTTTATGTCTGATACTGAAAATGATATAGAACTGCCAGACAGTGAGGATCTTCTGCAAAACATTgatgaagaaaatatttttaaaggccTGCAGGAAGAGACAaATGGTGAAAAATTAGATGAGGAAATGATCGATAATGTAAAAGAAGAATGGCGATCTCATTGGGGAGTCAAATGCAACATGTGTGAACAAGtttttccatacaaaattgaatttgagAAGCACTATCAGAATAATTATGGAATAGCTCCTGTTTATACGTGTTCATTTTGTAACAAGACTGCAGAAAAGTATTCTACATTTCGATCACATTGCTATCGGCACATAACTGAGGGCAGatacaaATGCCAAGAATGTCCTAAAGGGTTTAGTTTGCAAAGTATGCTGCACGTTCACATACTTTCCAAGCATACGAAAGCTAAACCTTTCGTTTGCGAGGAATGCGGGAAGAGCTTTGTGACTAAACCTGGTCTTAGGATACATCTTAAAAAACACAAAGCGGAGACTAAAGAAGATTATCCTTGTGTTGAATGTGGAAAAGTGTTGCATACAAGAGGGGGTCTTACATCACATATGAATGTCCACAGACTCGGACGAAGATTTATGTGCGACGTTTGTGGTAAAACTTTCACACAAAAAGTAAATATGCAACAGCATGTTAAACAACATACAGGAGATAAACCTCATACTTGTGATAAGTGTGGGAAAACATTTGCTGAAAAATCACATCTTGCTAGACATTATAGCTTTCATAGCAATATAAGACCATTCAAATGTGATGTGTGCCAAAAAATGTATAAGACTGAGAGATGTTTGAAAGTTCATAGTCTAGTACATGCTGCGGCAAGACCATTTGTATGCACGTATTGCAGCAAAGGTTTTCTTAGTAGCACAAAATTGAAGcAACATCACAACATTCACACTGGGGAGCGTCCCTATGCTTGCAAATACTGTGAACGCACATTTACAAATTATCCAAATTGGTTGAAGCATACCCGAAGAAGGCATAAAGTAGATCATAAAACAGGTGAAGGTTTGCTCCCTAAAGTACCCAAAGATGAGGCTCCGCCCACTCCTGCACCTGGACCTGCTGATTTTCCACCATCAGCAGACACGTCTGATCCACTTATGGTGGATTTTATTACCCTTAGTAAATCTGATGAATTGCTTTTGCAACAGGGATTGATTGGTCTTCCAAATAGTTTCGACGAACGATTTATGCTTCCACAACAATTGGATTTCTTATCTGGTTCATCAAACAATTCAAGTCTAATAAGCCCATACCTACAAATGCAGTTACCAGGACACCAGACCATATTACCGCAATCTATGCAATCGGCTAACGTTCAGTTCAGTGACTTACTTCACTCTTCGCTTCTACAACAATCACTTCAATGTGACTGA
Protein Sequence: MRHLELTETLHRDPPDNEIKEEDFETIDEIKEELPGLNLIDCENLIKNDFHSDDESLDLELPLSPTSALSESYELPSKQNMTPRRNRRKALQPQKAVHSEVSQSGSLGNSSECSQDASENNFLNLMGHDSSMLSLRTDLFMSDTENDIELPDSEDLLQNIDEENIFKGLQEETNGEKLDEEMIDNVKEEWRSHWGVKCNMCEQVFPYKIEFEKHYQNNYGIAPVYTCSFCNKTAEKYSTFRSHCYRHITEGRYKCQECPKGFSLQSMLHVHILSKHTKAKPFVCEECGKSFVTKPGLRIHLKKHKAETKEDYPCVECGKVLHTRGGLTSHMNVHRLGRRFMCDVCGKTFTQKVNMQQHVKQHTGDKPHTCDKCGKTFAEKSHLARHYSFHSNIRPFKCDVCQKMYKTERCLKVHSLVHAAARPFVCTYCSKGFLSSTKLKQHHNIHTGERPYACKYCERTFTNYPNWLKHTRRRHKVDHKTGEGLLPKVPKDEAPPTPAPGPADFPPSADTSDPLMVDFITLSKSDELLLQQGLIGLPNSFDERFMLPQQLDFLSGSSNNSSLISPYLQMQLPGHQTILPQSMQSANVQFSDLLHSSLLQQSLQCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01295457;
90% Identity: iTF_00789645;
80% Identity: -