Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284488.1:48284665-48286140[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 12 8.2 3.8 1 21 124 144 124 145 0.94

2 12 0.00069 0.076 15.1 3.4 1 23 152 174 152 174 0.96

3 12 5.8e-07 6.5e-05 24.8 0.6 1 23 180 202 180 202 0.99

4 12 2.4e-06 0.00026 22.9 2.1 1 23 208 230 208 230 0.99

5 12 3.7e-05 0.0041 19.1 1.0 1 23 236 258 236 258 0.98

6 12 0.0021 0.23 13.6 0.5 2 23 268 289 267 289 0.96

7 12 0.001 0.11 14.6 1.5 1 23 296 318 296 318 0.97

8 12 1e-07 1.2e-05 27.1 3.9 1 23 327 349 327 349 0.99

9 12 0.016 1.7 10.9 1.9 1 23 355 377 355 377 0.95

10 12 0.0001 0.012 17.7 1.0 1 23 383 405 383 405 0.97

11 12 1.1e-05 0.0012 20.8 1.2 1 23 411 433 411 433 0.98

12 12 0.00012 0.013 17.6 0.9 3 23 441 462 439 462 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	12	8.2	3.8	1	21	124	144	124	145	0.94
2	12	0.00069	0.076	15.1	3.4	1	23	152	174	152	174	0.96
3	12	5.8e-07	6.5e-05	24.8	0.6	1	23	180	202	180	202	0.99
4	12	2.4e-06	0.00026	22.9	2.1	1	23	208	230	208	230	0.99
5	12	3.7e-05	0.0041	19.1	1.0	1	23	236	258	236	258	0.98
6	12	0.0021	0.23	13.6	0.5	2	23	268	289	267	289	0.96
7	12	0.001	0.11	14.6	1.5	1	23	296	318	296	318	0.97
8	12	1e-07	1.2e-05	27.1	3.9	1	23	327	349	327	349	0.99
9	12	0.016	1.7	10.9	1.9	1	23	355	377	355	377	0.95
10	12	0.0001	0.012	17.7	1.0	1	23	383	405	383	405	0.97
11	12	1.1e-05	0.0012	20.8	1.2	1	23	411	433	411	433	0.98
12	12	0.00012	0.013	17.6	0.9	3	23	441	462	439	462	0.97

Sequence Information

Coding Sequence: atggCCTTATTAGAACCAGACAGTAATGATCCTTTaaaagaagaagtaaaaccAATAGATTTTGAAGAAGTTGTAGTAAAACAGGAAAAAAGCGAAAATTTTATAGCAGAACCTTTAGTTGTAGATAATACCAGCAATGGAATTTCAAAAAGTCTTCCAATTAAAGCAGAAGTTCTTTCGGATAATGAGGAATCTTCTCGAGAAAGTGTTATAACTTCTCCAGATTTACCAGAACCGATTAAACAAGAAGCCAACTCGGAAGACAGCGAGATATCACAAAGTGGTCATAATCATTCAGATGAAGAACTTCAAATTGAATCTCAAGAAAAACTGCAAACGCCTACCTCCACAGGAGACAGTGAAATGCCATTTAAATGCAGAGTTTGTCATGAAGGGTTCACAACTATAAAATGCTTTGAATCTCATGTGAAAAAGCCTGCACGAGACCGAACATTTGCTTGTTGTGCATGTAACAAGACATTCCGTGATATGACCCAGTTAAATGTACACACTCGGAAGCACACAGGTGAAAAACCATATGAATGCAAAATTTGTGCGaagaaattttccataaatggTAACTTAAATAAGCATATGCGCATACATACAGGTGAGAAGAGGTTTACATGTGAAATATGTGAACGAAAATTCAGTCAGTTTGCTCATCTTGAAGATCATATGCAAACACATTCGGCCGAGCGACCTTATGTTTGTGATCAGTGCGATAGTGGATTTAAAACGAAGGCTCGGTTACGTAAACACATTAAATCGCATGATAAAGaaattagaaagaaaaatataccatgtcaaatttgttttagaacGTTTTGGAGCTCAAAACAGCTGATGATTCACATGAGTCGACACACCAACAGTGAATATCCATTCCAGTGCATAGTTTGTgagaaaaaatttaaggaatatccaaattatcaaaatcattTACGTACGCACAAGCAACATCCAGGTATAAGAGCTTACAAGTGCCATTTGTGTGGCAAAGCATTCGCATCTTCTAGCCATTTACGGCGACATGTCAATTCCCATGCAGGATTAAAACCGTACCTTTGTGATTTATGTATGAGAGCCTTTCCTTGTGCCCAAAATTTAAAGAGACATATGAAgacacacacaggagaaaaacccCATGTTTGTGAAACTTGTAAAAAAGCATTTCTaacagttgaaaatttaaatagacaTATTCGGATACATACAGGGGAAAAACCATTCCCTTGCCCAACGTGTGGTAAAAGGTTTGCGCACAGTACGACAGTTAAGGAGCATTTGAGGCtacatacaggtgaaaaaccaTACGGTTGTAGTATTTGTGATAGACGCTTTGGTATGAATAAATTGTTATATAGACATATCCGTACAAGGCATCCTGAGCATGCtggaataataattaaaagtgaaaatcaGCATCCTATACAGTTTATTGATATTAAGAAGGAACCTGTGGACATTTCTTAA
Protein Sequence: MALLEPDSNDPLKEEVKPIDFEEVVVKQEKSENFIAEPLVVDNTSNGISKSLPIKAEVLSDNEESSRESVITSPDLPEPIKQEANSEDSEISQSGHNHSDEELQIESQEKLQTPTSTGDSEMPFKCRVCHEGFTTIKCFESHVKKPARDRTFACCACNKTFRDMTQLNVHTRKHTGEKPYECKICAKKFSINGNLNKHMRIHTGEKRFTCEICERKFSQFAHLEDHMQTHSAERPYVCDQCDSGFKTKARLRKHIKSHDKEIRKKNIPCQICFRTFWSSKQLMIHMSRHTNSEYPFQCIVCEKKFKEYPNYQNHLRTHKQHPGIRAYKCHLCGKAFASSSHLRRHVNSHAGLKPYLCDLCMRAFPCAQNLKRHMKTHTGEKPHVCETCKKAFLTVENLNRHIRIHTGEKPFPCPTCGKRFAHSTTVKEHLRLHTGEKPYGCSICDRRFGMNKLLYRHIRTRHPEHAGIIIKSENQHPIQFIDIKKEPVDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00789575;
90% Identity: -
80% Identity: -