Ccup010679.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ctenicera cuprea
Gene Symbol
-
Assembly
GCA_958336395.1
Location
OY284487.1:16644317-16649303[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.48 53 6.2 7.0 2 23 180 201 179 201 0.95
2 16 2.3e-05 0.0026 19.7 6.8 1 23 206 228 206 228 0.99
3 16 0.0002 0.022 16.8 5.0 1 23 234 256 234 256 0.97
4 16 0.00079 0.088 14.9 0.8 1 21 262 282 262 283 0.94
5 16 3.5e-05 0.0039 19.2 0.8 1 23 290 312 290 312 0.96
6 16 0.0009 0.1 14.8 0.3 1 23 488 510 488 510 0.96
7 16 1.9e-06 0.00021 23.2 5.9 1 23 516 538 516 538 0.97
8 16 1.5e-06 0.00017 23.5 3.5 1 23 544 566 544 566 0.98
9 16 7.2e-05 0.008 18.2 0.7 1 23 572 595 572 595 0.95
10 16 0.0093 1 11.6 0.8 1 23 607 629 607 629 0.98
11 16 0.0021 0.24 13.6 4.8 1 23 635 657 635 657 0.98
12 16 3.4e-06 0.00038 22.4 0.5 1 23 664 686 664 686 0.96
13 16 7e-06 0.00078 21.4 1.0 1 23 692 714 692 714 0.98
14 16 6.5e-07 7.3e-05 24.6 0.9 3 23 722 742 720 742 0.96
15 16 0.00011 0.013 17.6 0.1 1 23 748 770 748 770 0.99
16 16 0.06 6.7 9.0 2.1 1 23 775 798 775 798 0.97

Sequence Information

Coding Sequence
ATGGAGAATCCGGAGtacgattttaacaaaatttgccGGGTGTGTAAAAGCGAGGCCACGATTATGCGATCTGTTTTTGAGGATGACAAGAACGGCGTTCAGGGTCCCCGAATTGACGAGATGCTAATGGCATGTACTGCAGTTATGgTGAGCTCTGGAGACGGATTGCCCAATTTGATATGTCTGGCTTGTACGGTAAATCTCAACAACGCCTACCAGTTCAAAAAACAGTGCGAAAGCACAGATTCAAGCTTACGAGATTACCTTCAAGAGATGAGTGGCAGCGAAACTGTAAAAGAAGAGCCTCAGCAGTCCCAATTCAACGAATCAGCTGAATCGCTCGAATCTGAAACCTCCGTGTTGAATGATATTAATACAGTTATTAACGATATTGTTGATAATGTTACGGCAGAGGCAGAAGAAGAAGagggaaattttgataatatgaaAACAGATCCCGATGGCGATGAAGAAAATTATGAATGTACAGTAAGCAGTgattatattcaatttttggaaaataatcagCTACTCCTAACTTGTCGAACGTGTTCCAAATGCTTTACAACATTAGATGGCTTGAAATGTCACAAGCGTCTCCATACCGGAAGTTTGTTTAAATGCAAAGAATGTGGCAAGCAGTACACCAGGCAAAATCACCTGCACAGGCATGAAATGACGCATGGACGTCGAAAAATCCACGTatgtaaaatttgcaataaaactttaactagATTCGAACATCTTAAACGTCATTTGGTGACACATTTGAAGGAAAAACCCTTCAGTTGTGTTACGTGTAATCGTGGCTTTAATCGATCAGAACACCTGGCAAATCATGTAAAACGTTGCAAAGGTGATCGTGTACATATTTGCGACATATGCAACAAAGGCTTTAACCGTGAGGATAGCCTGGAGGTACACAAACGTTTGCATGACAACAAAATGCCAATTTTACCCACCTTAGAAAACTTGGATAACATTGATGAGCATTATGTTGAAATTGAGTGCGGTGATGGTGATGACAATAATGGTCCGCCCCCATTTTCCGATTCTGACAGTGAAGCTGATGTGACCGACTGTTTGGAGCCCCAAGTCGATATTTCTGAGAATCCTGAACCTGTAAAGCTTACTGATATATCGGAGGTTGCTAATCTAGGCAATGAAGTGTATGGTGAAGTGGATTCACAAGAATTAATAGACGAGAAAAACAAAATGGAAGAAGAATTCTACGAAAATGAAAACGCCGCCCACTTTGAAGTCAAGGAAGAGCAAGAAGATACCAACAGCGAAGACTCTGAATATCTACCAACAAAACCGGTAGTGAAAGTTAAACGCAAGCGTGGACGCCCTCGCAAGCATGTTACTATGAAAATGCCAGGTCGACCAAGAGGTCGTCGTccattgcaaaaaattaaaaccgaaCCTGCTGATGAACCTAATAACGAAGCCGAGGGTGAATTCCCATGTCCGGCTTGCGACAAAGTGTTCACCAAAATGAGCATGCTTGACAAACATGCTTATAAACATGACGGTTTGAAAATCCATCCTTGTACAAtttgcaataagaaattttCACGTAGTAATCACTTGAAACGGCACATGCTGTCACACTCTTCACAAAAGCCGTTTTCGTGTGAAATCTGCACGAAGAGCTTTAACCGGCGGGACCATTTAATGCAGCACATGAAGTTGCATGCTAGAGAACAGGATTACGAGTGTGATATTTGCAAAAGACCTTTTGGTCGTGCTGACCATTTGGCTAAACATAAAGCCTCGAAGCATAATATAGGGGAGAAGATTATGGGAGAGAAAAAATATCAGTGCTCTGTTTGCTTGAAAGGTTTTACCACGGAAAAGTATAGAGATGTGCATATGAAAGGCCATATGGGAGATAAAAAGTTCCAATGTAGAACTTGTGAGAAGACGTTTCTTTCAAAATCACATCTCACTGAGCATATTAAGTTCCACAATGAAAATTCCAAGAAGTTTTTGTGCTCTGAGTGCGGACAGCGGTTTATTCGTAACGATTACCTTGTAATACATATGAGGAGACACAGAggggaaaaaccttttaagtgtcAGTATTGTGGAaaagGTTTTCCACGAACTACCGATCTCACTGTTCATGAAAGATACCATACCGGTGAGAAGACACATCTTTGTACCATTTGTGGTCGTGGTTTTGGCAGGGCATACAATTTAACAGTTCATATGCGTacccatactggtgaaaaaccgtatCAGTGCACTTACTGTGAAGCTGCGTTTGCTCAGGGCAATGATTTAAAGGCACATGTACGTCGACACACTGGAGAGAGATTCCAGTGTGAGCACTGCAGTGAAAGTTTTCTTATGGGATATTTGTTGACTCAGCATAAAAGAACTGTGCATGGTCTGAATGTAGTAAGTAACATACGGAGACTGCAACCCGTTATAAAGAATCGTCAGCAGGATGACACGGATGATCCACCTATAACCATTCCGTTGCCAACTCCAGTTGTACCTTCCTCTGTATTTAATGCTCAGTTACAAGCACAACTGGCAGTAGCCCAGCTGCAACAGCATATAGCTCGGCAGTAA
Protein Sequence
MENPEYDFNKICRVCKSEATIMRSVFEDDKNGVQGPRIDEMLMACTAVMVSSGDGLPNLICLACTVNLNNAYQFKKQCESTDSSLRDYLQEMSGSETVKEEPQQSQFNESAESLESETSVLNDINTVINDIVDNVTAEAEEEEGNFDNMKTDPDGDEENYECTVSSDYIQFLENNQLLLTCRTCSKCFTTLDGLKCHKRLHTGSLFKCKECGKQYTRQNHLHRHEMTHGRRKIHVCKICNKTLTRFEHLKRHLVTHLKEKPFSCVTCNRGFNRSEHLANHVKRCKGDRVHICDICNKGFNREDSLEVHKRLHDNKMPILPTLENLDNIDEHYVEIECGDGDDNNGPPPFSDSDSEADVTDCLEPQVDISENPEPVKLTDISEVANLGNEVYGEVDSQELIDEKNKMEEEFYENENAAHFEVKEEQEDTNSEDSEYLPTKPVVKVKRKRGRPRKHVTMKMPGRPRGRRPLQKIKTEPADEPNNEAEGEFPCPACDKVFTKMSMLDKHAYKHDGLKIHPCTICNKKFSRSNHLKRHMLSHSSQKPFSCEICTKSFNRRDHLMQHMKLHAREQDYECDICKRPFGRADHLAKHKASKHNIGEKIMGEKKYQCSVCLKGFTTEKYRDVHMKGHMGDKKFQCRTCEKTFLSKSHLTEHIKFHNENSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCQYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCEAAFAQGNDLKAHVRRHTGERFQCEHCSESFLMGYLLTQHKRTVHGLNVVSNIRRLQPVIKNRQQDDTDDPPITIPLPTPVVPSSVFNAQLQAQLAVAQLQQHIARQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00789538;
90% Identity
iTF_00789538;
80% Identity
-