Ccup046986.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ctenicera cuprea
Gene Symbol
Hr39
Assembly
GCA_958336395.1
Location
OY284494.1:32971382-32977326[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.9 5.7e+04 -5.3 6.4 111 163 185 231 115 279 0.38
2 4 1.6e-08 0.00046 21.4 0.0 1 27 392 418 392 462 0.79
3 4 0.14 4.1e+03 -1.5 0.0 93 113 460 480 416 491 0.70
4 4 1.7e-73 5e-69 235.4 0.0 202 408 520 721 435 721 0.90

Sequence Information

Coding Sequence
ATGGCCGCAGACATGAGGTCTCCCAACGTGTCTGTCACCCCCATCAACGTGGAACCCTATCCTCCAGCTTCCCTTTCCAATGGGGTTCTATCTAACCACAACCACATCACCAGTGACTCGCAGCACTCGCACAACAGGCCTCCTTCTGGCACACCACTCACCATCACCAATGGGGACACCCTCGACAGCAGCTCCGATGCAGAAGTCGCCCAAATCGACTTCCACTCTGTCAATTTGAGGCATAAAAAGAAGCGCGACGAAAATGATGTGCCTAGGCCCATGTCGTGGGAAGGAGAACTCTCGGATGGGGAAAGGGATATGTGCGTTGATGAGGATGGAGGATCTCAGCTACCCGAAAATCTCTCATTATCGCAATCGAAGCAAAACCTTCCATTATCAGAGCCGAAGGAAAGCCCCATATTGAGGCTGAAGCAACCTGCAGTGAGCAACTACTCCCTGCACAGTACGCCAAGCAATTCTCCCCTGTTAAGTCAGAGGCACCCGGGAAGCGTGCCGCTCTTGACTCACAAGGACATTATGCACAAAGCTCTCAATGTGCCCCCAACGCCAAGCCCTGACTCGGCAATCCATTCAGCATATAGTGTGTTTAGTTCGCCAAGTCAGAGTCCTCTTACGCAAAGACATTTAACGCCAAACTTGAGTCGGAACAATAGTGATGCTTCGCACTCTAGCTGTTGTAGTTATTCCAGTGTTTCGGTGTCGGTTTCCCCTACGCAACAGTTTTCTCCTACTCATAGTCCTATACAGGGCCGTCATATGCCTGGTGGTATGCACGGCAGTCCATTGCACCATAACGTCTTGTATCGAAGTCTACAAGAGGACGCCGGGCTGCAATACGCACCTGACCATGATGGTCTAGAAGAGGCTGAAGATAAGACTGGTTTAGTTCACACTTCCCTTCCTGCACAACCTGGTATTTCGCGACAGCAGCTTATTAATAGtcCGTGTCCAATTTGTGGGGACAAAATATCCGGTTTCCATTATGGAATATTCAGTTGCGAATCTTGTAAAGGTTTCTTCAAGCGCACAGTACAAAATAGAAAGAACTATGTATGTCTGAGGGGTGCTGCCTGTCCTGTCACGGTGGCGACAAGAAAAAAATGCCCCGCTTGCCGATTCGATAAGTGTTTGCAGTGCGGCATGAAGCTTGAAGCAATAAGAGAGGATAGAACGAGAGGGGGCCGTTCAACATATCAGTGCTCTTACTCGCTGCCACCTTCGTTAGCTAGCCATCCAGAACTGAGGGCAAGTGCCACAGACCTTCGACAGGGTTACGGGGATCCACCCCAGCAAGTACTGAGAGTCAAACTTGAACCTTCCGAATCAGGCTCGTTTTTGAAAAGGTCTACGCCAACCAATTCTAGGTTAGGTGTCCCACCATTATTGCAAGAAATAATGGATGTGGAGCACCTATGGCACTACAGTGAGATAGAGTTAAACAAACTGAGCGATGGTACCCTGGGTAAGGCGGGTTCGAGTAGTGCGGTGCACAACTTATCTTCACACCCCTTACTTGCCGGTACTGCCCTTGCCGGTTCGACTGACACTAATCCAGATTTCGTTGCGAATTTGTGCAATATTGCCGATCATCGATTGTACAAAATTGTCAAGTGGTGTAAAAGTTTgcctctatttaaaaatatatcgATCGATGATCAAATATGTCTGTTAATAAATTCCTGGTGCGAGTTATTGTTATTCTCGTGTTGTTTTCGATCCATGTCCACCCCGGGTGAAATTCGAATATCCCTAGGAAAAAGCATCAGTTTAGAGCAAGCTAAAGAAATGGGGTTGGGAGCCTGCATAGAACGCATGCTTAATTTTACCGATCACCTGAGACGACTGAGGGTCGACAAGTATGAATATGTTGCCATGAAAGTTATCGTACTACTTACTTCAGATACGTCTGAACTACGAGAAGCAGAGAAGGTGAGAGCTTCACAGGAGAAAGCTCTGCAAGCTTTACAGCATTATACCTTGGCCCATTATCCGGACGCTCCTGCCAAATTCGGGGAACTTCTACTCAGAATACCTGAATTACAACGAACTTGTCAGgtgGGTAAAGAAATgttaacaataaaatcaaaGGACGGCGAAGGGCCAAGTTTCAACCTGCTCCTGGAGCTGCTTCGAGGGGACCACTAG
Protein Sequence
MAADMRSPNVSVTPINVEPYPPASLSNGVLSNHNHITSDSQHSHNRPPSGTPLTITNGDTLDSSSDAEVAQIDFHSVNLRHKKKRDENDVPRPMSWEGELSDGERDMCVDEDGGSQLPENLSLSQSKQNLPLSEPKESPILRLKQPAVSNYSLHSTPSNSPLLSQRHPGSVPLLTHKDIMHKALNVPPTPSPDSAIHSAYSVFSSPSQSPLTQRHLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPGGMHGSPLHHNVLYRSLQEDAGLQYAPDHDGLEEAEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLASHPELRASATDLRQGYGDPPQQVLRVKLEPSESGSFLKRSTPTNSRLGVPPLLQEIMDVEHLWHYSEIELNKLSDGTLGKAGSSSAVHNLSSHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRISLGKSISLEQAKEMGLGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQHYTLAHYPDAPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLLELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951009;
90% Identity
iTF_00838593;
80% Identity
iTF_00399620;