Ccup018327.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- tfip11
- Assembly
- GCA_958336395.1
- Location
- OY284488.1:23295319-23325742[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0045 1.3e+02 3.7 0.0 119 152 429 462 414 482 0.84 2 3 1.8e-97 5.2e-93 313.3 12.0 1 275 756 1027 756 1027 0.98 3 3 0.29 8.5e+03 -2.3 0.1 244 270 1041 1067 1032 1076 0.59
Sequence Information
- Coding Sequence
- ATGTCTGACCaagaatatgaaaaatttgaaattactgattatgatattgaaaatgaatttaatCCTAACAGAACTCGAAGGGGTTTAagcaaaaaccaacaaatttatgGTATTTGGGCAGACGACAGTGACAATGAAGGAGATGAAAGACCATCTTTTAAATCCACAAAAgcttcaaaaaattactctGCACCAATAGGATTTGTTGCAGGAGGAATTCAACAAGCTGGAAAGAAAGATAAGCGAGATAATGCAGGTCATAAGAAAGAACCAAGTGAAGAGAATGAATCGGAAACACCATCCGcttcatttaaaattgaaaatagttcTAGCGAGTCAGAAACTGAAATTCAAGCACCCAGAACAGGTTTTGGATCACAAAGAACTAAAACCCAATCAACAGTCACAGAGATTACAGGAGATATCGCAGGTTTAAGAAAAGCAAACAGTCAGGCAAATGCAAGTTTAATAAGAAAAGGTGTGGGTAACTGGGAGAAACATACAAAGGGCATTGGAGCTAAGCTTTTACTTCAAATGGGTTATCAACCTGGAAAAGGATTAGGAAAAGATCTGCAGGGTATTTCTGCACCAGTTGAAGCTCACCTCAGGAAAGGGCGAGGAGCTATAGGGGCTTATGGACCAGAAAAGGCAGCTAGTATACCTACAGTAAAgGAGGAAGGCaggaaacaaattataaatccAAAGAACAAAGATGGAAGAGAAACAAGAGACAGACAGCAAATAATAGAGATAACAGAGACATTTTATACTGATCTATATGCCTCCCATCTGAAGGAAGACCcagaatacaaaacaaatacgGGCAAAATAATGAACATCGGTTCCGAAGAGATACCTGACATAAACAAAGAAGAAGTAATAATGGCCTTATCcagcatgttaaataacaaagcCCCAGGAGAAGATGATATTACAGTAGGACTTTTAAAGGAAGGAGGCGAAGAAATCATAACTAAAATGTGTGAACTGTTCAACGAATGTCTACAGAAAGGAAAAATACCTGACACATGGAACAATGCCATAGTTGTGCTTCTATATAAAAAGGGGGATAGAGCAGACATAAAAAACAGACTTACGCaaacaatgtACAAAGAAGATCCACATATCACGATTGATCAATACCACATTGAGAATGTCGAAAAATACATATACCTGGGCCACCAAATACAACTAGGAAGAGACAATCAAACAGCGGAAATATATAGGAGAAGAAGACTTGCCTGGTCCGCATTCGGAAAACTCGGACATAtacttaaaaatacaaacattcctTTAAAACTTAGATCAAGACTGTTTGATCAATGCATCTTTCCAGTCCTGACTTATGGCTGCCAAACATGGACTTGGACAAAACAAACACTGAATAAAATAGCAGTCACACAAAGATCCATGGAGAGACAGATGATTGGCATATctctaaaagataaaaaaagaaatcattgGATTAGACAAACTACAGGGATAAGAGACGCCGTCGCAACAATTACCACACTAAAATGGAGCTATGCTGGACATATAGCGAGATGTAACGATTCACAATGGAATAATATCATTCTTCACTGGAGACCATACCTAGGTAAAAGGAAAAGAGGACGTCCATCGACACGCTGGACAAATGATCTTAAGCTGACTGCAGGACTGAATTGGACCAGAGAAGCACAAGACAGAGACCGTTGGAATGCCATGGGGGAGGCCTATGTTCAAAGTTGGACGGAAAAGATAATTGATGTTGAAGAAGTGGACCAAGAATCTGAGTCAAAATGGAAGAAATCTGATATGGCAAAGAAAAAAAGCAGATACTATTACAGGACTGTTGATGATGTTATTGAAAAAGGAAAACGTCCAGGAGCTTACGTGGGTTGTGGACCAACAAGTGAACTGAGTAAAGTAAAAGTTATTGATATGACGGGTCCTCAACAAAGAATATTAAGTGGTTATCATGCTCTCAGTGGTCTAAAGGCACCTCCTGGAGTGGAACATTTTGAAGATGTCGTCCATAAAAAATGTTCCAATTTTGCATTACCAGAAATACAACATAATTTAGATCTGTTAGTCAGCATGTGTGAGCAGgataTCATTAACATTGATCGCAATACGAGATACAACCAAGATAAAGCAGTAGCTTTAATCCATgaagaaaaatcgttaaataaaattttagaagatGAGGATGCACATATAGATAACTTAAAGGAGGTTCTTGAGAATGTTGATAAATTAACGGATCCATCGCAAGGATTATCTTTAGGACAATTTGCtcaaatgtttaaagatttacAGCAAAAACATTCAGAAGAGTATTATATGTATCATCTGGGTGAGTTGGCTCCTGGCCTCGTAGGACCTTTAATAACATCAGCACTTGCAAGTTGGTCACCTTTGGTATCTCCTAACCAGTACACAGATGTGTTTATGCAATGGAAGGGAATCCTAGAGAAACCTCAACAACGTGGGACTCTAGAAGGTAATTGTATGGGAATTCAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCTGTATTGAGAGCGTGTGTTAGTAATTGGAATGTTCGAGATTGTGATCCAATGATAGCCTTTTTGGAAATATGGAAACCTCTTCTGCCACAATGGGTTTTGGATAATATCTTAGATCAGTTAATTATGCCTCGCTTGACTACCGAAGTAAACAGTTGGAATCCACTTACTGACACTGTTCCTATCCATTATTGGATTCATCCGTGGATTCCAATATTAAATACACGTTTACATACTGCAATCTTCCCTGTAATACAAGAAAAACTGGGAGCTGCTCTAACCAACTGGCACCCATCTGatcgatcagcaaagttaatgCTAAAACCTTGGAAGGATGCTTTACCTAATGGTTCATTCGTTGCGTTTCTTCTAGCTCACATTGtaccaaaattacaattatgtaTGCAGTCCCTTGTTATCAATCCACATCAACAACACTTAGATGCCTGGAACTGGGTGATGGATTGGAATGATATGCTATCAGTTGGgaatttaactttaatattagACAAGTATTTCTTTCCTCGATGGCTGCAAACTCTTGCTATGTGGCTCAATCATAATCCTGACTACAATCAAGTAACTGAATGGTACTCAGGATGGAAGAGAATGCTATCAGAAGAACTGCTTGCACAACCAACAATTAAAGACAACTTTCACAAAGCGCTAGAAATGATGAATCGTGCAGTTAGTTCAGGACAACAACCTGGTGCTAAGGAATTTGTATCATACCTTACGAATATGGAAACCAACGCGCCACCTCCTCCACCACCACCAAGGGTAGaggCTATAGCAGAAGCAGTTAGGACAGCTTCCCAGATACCACAAGGATTCAAAGATCTTGTTGCTAAACGTTGTGAAGAGAAAGGCATCTTGTTTGTACCTGttcttaacaaattttatgaagCTAAACAAGTTTATCGACTTGGTTCTAATGGTGTTCAAGTTTATTTTGACAGAAGTGTTATATTTTACTCACAAAATAATTCTTCGTGGTTACCTATATCATTAAATAGGTTATTAGATATGGTGTAA
- Protein Sequence
- MSDQEYEKFEITDYDIENEFNPNRTRRGLSKNQQIYGIWADDSDNEGDERPSFKSTKASKNYSAPIGFVAGGIQQAGKKDKRDNAGHKKEPSEENESETPSASFKIENSSSESETEIQAPRTGFGSQRTKTQSTVTEITGDIAGLRKANSQANASLIRKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASIPTVKEEGRKQIINPKNKDGRETRDRQQIIEITETFYTDLYASHLKEDPEYKTNTGKIMNIGSEEIPDINKEEVIMALSSMLNNKAPGEDDITVGLLKEGGEEIITKMCELFNECLQKGKIPDTWNNAIVVLLYKKGDRADIKNRLTQTMYKEDPHITIDQYHIENVEKYIYLGHQIQLGRDNQTAEIYRRRRLAWSAFGKLGHILKNTNIPLKLRSRLFDQCIFPVLTYGCQTWTWTKQTLNKIAVTQRSMERQMIGISLKDKKRNHWIRQTTGIRDAVATITTLKWSYAGHIARCNDSQWNNIILHWRPYLGKRKRGRPSTRWTNDLKLTAGLNWTREAQDRDRWNAMGEAYVQSWTEKIIDVEEVDQESESKWKKSDMAKKKSRYYYRTVDDVIEKGKRPGAYVGCGPTSELSKVKVIDMTGPQQRILSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVSMCEQDIINIDRNTRYNQDKAVALIHEEKSLNKILEDEDAHIDNLKEVLENVDKLTDPSQGLSLGQFAQMFKDLQQKHSEEYYMYHLGELAPGLVGPLITSALASWSPLVSPNQYTDVFMQWKGILEKPQQRGTLEGNCMGIQPYDSLLWHTWVPVLRACVSNWNVRDCDPMIAFLEIWKPLLPQWVLDNILDQLIMPRLTTEVNSWNPLTDTVPIHYWIHPWIPILNTRLHTAIFPVIQEKLGAALTNWHPSDRSAKLMLKPWKDALPNGSFVAFLLAHIVPKLQLCMQSLVINPHQQHLDAWNWVMDWNDMLSVGNLTLILDKYFFPRWLQTLAMWLNHNPDYNQVTEWYSGWKRMLSEELLAQPTIKDNFHKALEMMNRAVSSGQQPGAKEFVSYLTNMETNAPPPPPPPRVEAIAEAVRTASQIPQGFKDLVAKRCEEKGILFVPVLNKFYEAKQVYRLGSNGVQVYFDRSVIFYSQNNSSWLPISLNRLLDMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -