Ccup018947.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- -
- Assembly
- GCA_958336395.1
- Location
- OY284488.1:31515861-31530974[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-12 2.4e-07 32.1 0.4 3 74 10 85 8 154 0.77 2 2 0.054 3.2e+03 -1.3 0.3 109 129 185 204 144 222 0.64
Sequence Information
- Coding Sequence
- atgttaagtattttatgtCTTTTCAGCGTTGAGAGAGACCGCCTTCGGGAGCGGGAGAGGCAGGCACGTGCCCAGATGTCCTCGCAAGTGGCTGAAAGAGACAGAGACCAGGAGGCTCCTGGAGCGCCGCTCTTCGCAGCACCTGTCAGGGTAAACCCGTCCTCAGCCGATCGAGTGACGCAACAAATTCAGAGCAAGTTAGGCGATTACCAGCGAGTAAAACCCTTTCTGGACGATTCGAAGCGGCTCATCGGGGTGGATGGTGTTCCTCCTAGTCCTGGTGGTCCTCTCACGGCTGCAGTTTCGGCAACTACATCTCGACCTCTACCTGCCATAAATCCTGCCCTAATACCTTCCAGACTCCAGCCACCTCCAGACACCAGGCCGGAGTTTAAAAAGCCCAACCAAAATAACGGGCGGCCTCCACACCATTCCCATCAACGGCGGGATTTCCTAAAACCCACGGATGGGAAGCCTCCTTACGAAGGCCGTGGTGGATATCCAGGGCAACCCATTAAACCCGGAAACTCCATCAGTAATCACCGGACTAATGGGATCGTTCCAGTTAAGCCACCACCACAGCAATCTTCGTCTTCATCCCTAAACTCTTCGCGAATTCATAGTGCAGCCCGCAACCTACCTCGCATTCCGCTTGATCAGGTAAGTGCTAGATTGACGACGATTGATGTAGTCACGAACTCGGAGCTGTAA
- Protein Sequence
- MLSILCLFSVERDRLRERERQARAQMSSQVAERDRDQEAPGAPLFAAPVRVNPSSADRVTQQIQSKLGDYQRVKPFLDDSKRLIGVDGVPPSPGGPLTAAVSATTSRPLPAINPALIPSRLQPPPDTRPEFKKPNQNNGRPPHHSHQRRDFLKPTDGKPPYEGRGGYPGQPIKPGNSISNHRTNGIVPVKPPPQQSSSSSLNSSRIHSAARNLPRIPLDQVSARLTTIDVVTNSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00788891;
- 90% Identity
- iTF_00788891;
- 80% Identity
- -