Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284487.1:12094345-12096244[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-07 3e-05 25.3 0.0 5 39 1 35 1 39 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-07	3e-05	25.3	0.0	5	39	1	35	1	39	0.89

Sequence Information

Coding Sequence: ATGCAACAGGCTATAGCAGCAGTAAGAGGTGATAATATGCCGTGTGCTACAGCAGCCAGACAGTTTAATGTCCCACGAAGTACCCTCAAAAGGAGGGTTCTCGAGAAAAATCGCGATGCCATTGAAGATAAAAAGATTCTAGGAAGCTATCGATGTGTATTTAATCAGGAACAAGAGGAAGAACTCCTTAATCATATCTTTGATATGGAACAACGAGTTTATGGTATATCATTGCAGGATCTACGCCATTTGGCATTTCAGCTTGCTGAAAAAAACAATCTACCGCATCGATTCAACAAAGAGAAGAGAATGGCAGGCAAGGATTGGGTGACATGCTTTAGAAAACGTCACCCTAATATTGCCCTAAGAAAACCAGAATCCACGTCGATGGCCAGAGCACAGGGGTTTAATAGAACcaatgtaaacaaattttttaacacccTTCAAACAGTGCAAGACAAACATTTCTATCCTGCTCATCGAGTATACAATGTCGATGAAACTGGTCTTTTGACAGTTCAAACGAGGAACACTAAAGTTTTCTCGTTTAAGGGAAGGCGTCAAGTTGGTGCTATTACGACAGCGGAAAGAGGTTTGCTGTCTACATTTGCAGTTTGCATGTCCGCAGGAGGCACTTTCGTTCCTCCATTTGTGATCTTTCCAAGAAAACGAATGAAGATTGAACTTCAAGATGGAGCTCCCCCAAGAACCGAGTTTGCCTGCAATCCCAGCGGATGGATGCAGACGGATATATTCATGCAATGGTTTgatcattttttgaaacacgCTAAACCATCCGAACAAGATCCAGTGCTGCTAATTCTGGATGGTCATGCCACCCACACCAAAAATATTGACTTTATAGAAAAGGCCAGAAAGAATTTTACAACAGTCGTATGTTTACCCCCTCACTGCAGCCACAAGATGCAACCTCTAGATGTGTCATTTATGGCACCTTTCAAAACTTTCTACGTCCAACCTTGTGAAAAATTCCTGCGTAACAACCCGGGCAGAGTTATAATACAATTCCAGATCAGTACACTTCTTGGAGAGGCATTTTTGCATGCAGCTGTGCCAACTACGGCTATAAATGGATTTCGCAAGTGTGGCATTTTCCCTTTGGACCCGAACGTGTTCTCTGACGTAGATTTTGTTGCTGCAGAGGTATCTGACATTCCCATGATTCCTGAAAACAATAATCCCCCTAATGCTGAAGACGGtgtatcaaataataaaaatgcagCAGTAGATGGACGAGCAGATGCAACTACTGCTGAAGGAGGAGCAGTGGTTGGACGCGAAGTTGGAGTTACAGCTGAAGACTGTGAAGCGGATGGACTAGAAGGTCGAGCGACAGCTGCAGGAGATGCGGTAGATGAAAACCATACAGTAGATAGACCAGAAGCTGAAGTTGCAGATGAAGAACATGCTTCTCAAGATGAAGTTACGAGAAACGGAAACAATGTAGTAGACAGTACTCCGACATCACAACCCAAATCATTTGCAGTACTAAGCCCAAAAGACATTATTCCTTTGCCTAAACAAAAAAGcctaaaacaaagaaaaacaaaccgAAAAAATGGCAAGACAGCGATAATAACATCTAGTCCATACAAAAATGAACTCTTACAAGAAAAGTGGAAGAAAGAGGACgaggataataaaaataaaagaaagcatGAAGAAAATGACGTGAAACCTTCAACATCCAAAAGTGTCCCGCTTTTTGAATCAGATGATGATGAATCAGATGATCAACCATACGATGAACAAGATGTGGAATGTTTTTATTGTCGTGGGCCGTTCTCGGAGTCTAAGGATGACGAAGGTTGA
Protein Sequence: MQQAIAAVRGDNMPCATAARQFNVPRSTLKRRVLEKNRDAIEDKKILGSYRCVFNQEQEEELLNHIFDMEQRVYGISLQDLRHLAFQLAEKNNLPHRFNKEKRMAGKDWVTCFRKRHPNIALRKPESTSMARAQGFNRTNVNKFFNTLQTVQDKHFYPAHRVYNVDETGLLTVQTRNTKVFSFKGRRQVGAITTAERGLLSTFAVCMSAGGTFVPPFVIFPRKRMKIELQDGAPPRTEFACNPSGWMQTDIFMQWFDHFLKHAKPSEQDPVLLILDGHATHTKNIDFIEKARKNFTTVVCLPPHCSHKMQPLDVSFMAPFKTFYVQPCEKFLRNNPGRVIIQFQISTLLGEAFLHAAVPTTAINGFRKCGIFPLDPNVFSDVDFVAAEVSDIPMIPENNNPPNAEDGVSNNKNAAVDGRADATTAEGGAVVGREVGVTAEDCEADGLEGRATAAGDAVDENHTVDRPEAEVADEEHASQDEVTRNGNNVVDSTPTSQPKSFAVLSPKDIIPLPKQKSLKQRKTNRKNGKTAIITSSPYKNELLQEKWKKEDEDNKNKRKHEENDVKPSTSKSVPLFESDDDESDDQPYDEQDVECFYCRGPFSESKDDEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00329185; iTF_00329186; iTF_00329187; iTF_00329188; iTF_00329189; iTF_00329190; iTF_00329191; iTF_00329192; iTF_00329193; iTF_00329194; iTF_00329195; iTF_00329196; iTF_00329197; iTF_00329198; iTF_00329199; iTF_00329200; iTF_00329201; iTF_00329202; iTF_00329203; iTF_00329204; iTF_00329205; iTF_00329182; iTF_00329183; iTF_00329184; iTF_01047117; iTF_01047120; iTF_01047122; iTF_00399019; iTF_01047119; iTF_01047121;
90% Identity: iTF_00399019;
80% Identity: -