Ccup009239.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- foxd3-a
- Assembly
- GCA_958336395.1
- Location
- OY284486.1:81421644-81422645[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-40 5.8e-37 127.3 0.0 2 87 68 152 67 153 0.97 2 2 9.5 2.7e+04 -3.0 0.0 22 36 262 276 258 279 0.70
Sequence Information
- Coding Sequence
- ATGTTAATGATGGACGATGGTTGCCGAATTTTTGATCCGCACGATTTACACCAAACCGAAATGTTGCTGGAGCAAAGATATCCAACGTCCGAGAGTCCGTTAGACCTACGAGGGCAATCAGGGGACTCCCccgaagaaaataaagaaaaagaagttgGTTACAACAAAGAAAAATCCCCCAAAAAGACCTCGAGCCTCATTAAACCACCTTATTCCTACATCGCTCTTATAACCATGGCCATTTTGCAGTCTCCGCACAAGAAATTGACTTTAAGTGGAATTTGTGAGTTCATAATGACAAGGTTTCAATACTACCGGGAAAAATTTCCCGCGTGGCAGAATTCAATACGACACAATTTGTCGTTGAACgattgtttcattaaaatacCAAGAGAACCAGGAAATCCAGGCAAAGGTAATTACTGGACCTTAGACCCTTTGGCCGAAGATATGTTCGATAACGGAAGCTTCCTCCGTAGGAGAAAAAGGTACAAGAGACCATCACCAACCAATTTGCTCCTCAGGGATCATCACAGTTCCGCTATGGTCGCTTCCTTTTTAAGTCAGGAAAACTACCAGCACGGGTTGTTTTCACATCCAAGCCTCCACAACCCTTATTCGTACCTTCCGAGTTTACCAACAAGTTTACCCAACGGGCTACCACTTTTACCGCCCATTGATCTATCGCGCCTTGGATTGGGTCATTTGGGAATTTTACCTCAACCAGGAATTTGCAAGCCGGTACCGGTGCAACCCCCAAGTGTAACCCCTTCTGATATCGAAGATCTCACCACAACTGAGATTTACAAGAAAGCCAAAAATGGGTTTTCGATAGAATCCCTCATCGGATGCGCAGATGATAAACAAAGTAAGCCTTTGCAGTTAGTAAAGCTTCGGTCTGACAGTCCGGAACCGTTAAACATGTCGCCGAAATTTTTGCCAATTCACAACCAAGTTTCGGCATTTTCACCTCTATCATCATCGGACGATTGGACTAGATGA
- Protein Sequence
- MLMMDDGCRIFDPHDLHQTEMLLEQRYPTSESPLDLRGQSGDSPEENKEKEVGYNKEKSPKKTSSLIKPPYSYIALITMAILQSPHKKLTLSGICEFIMTRFQYYREKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPLAEDMFDNGSFLRRRKRYKRPSPTNLLLRDHHSSAMVASFLSQENYQHGLFSHPSLHNPYSYLPSLPTSLPNGLPLLPPIDLSRLGLGHLGILPQPGICKPVPVQPPSVTPSDIEDLTTTEIYKKAKNGFSIESLIGCADDKQSKPLQLVKLRSDSPEPLNMSPKFLPIHNQVSAFSPLSSSDDWTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01515297; iTF_01284066; iTF_00001769; iTF_00152063; iTF_01294770; iTF_00267938; iTF_00270855; iTF_01293383; iTF_00977130; iTF_00272269; iTF_00927310; iTF_01291283; iTF_00269558; iTF_00950526; iTF_00949605; iTF_00838221; iTF_00788330; iTF_00641205; iTF_01345499;
- 90% Identity
- iTF_00838221;
- 80% Identity
- -