Ccup002901.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- TSC22D1
- Assembly
- GCA_958336395.1
- Location
- OY284486.1:10891260-10896291[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 3.9e+04 -3.5 0.1 23 44 59 81 57 86 0.59 2 2 3.4e-27 6.7e-23 82.3 1.8 1 47 536 582 536 586 0.97
Sequence Information
- Coding Sequence
- ATGATTCCGGGTAATGTGGACCCTCGTAGACCCGACAAGGTACAGCGGTACAAACCAGCTGCCTCGGGAAATGGAAATGCTCCCGGGGAAGACTTAACTCCCGATTACATGAATATTTTGGGTCCAGATTCGACCACGGGAAATGTGCCGGGAGACAGCAAGGTTagcgaaaatataaaaaacgtgGAAGCAAAACCCTCATCAAATCTGCAACAACAAAATGTTCAAGCACGAGACGATGCTTCGAAAACCAAACCCGAAGCGGCTCCTGCAATTACTACAAATGCAAGTAATGTGATACCCACAAGCCCTCAATATGGTGTTGCTATAATTCCCACCACAACAACTACTAATGACATACCCGCTGAAGCAACCACACCTGCTACAGACACCATCACTGAATCAACCCCAAAAACATCAGAAACTGAAAACAAGGACATACACTCGACGCCTAGTAAAAATGACCGCTTTAAGGTGGTGAAAATTGCAAGTTCAGAACCTTTTAGAAGAGGTAGATGGAAATGTATGGATTTTGTGGATCAAACGCCACCCGTCACGGCTCAACAAACGAAGACAACGACTCAAGGTAGTACCACCAGTGTTCAAATGGCAGGGAATGTTTATTTGCAAACGCAAAGCTTGCCGCCTCATCAGATTCAACAGTTATTATTGCAAGGGGCTCTCACTGCTGTCCCACCTCAGTTCTATCAAGGCAACTTGCAGTCGCAGGTGGTACCTCAAACGCAGTATTTCTACCCGGCTGTTCAAACTCAAGGGAATGTGCAACAAATATTAAATCCGGGGGTTGTACCTTCAAATTCCATGCAACCCCAGTTTGTGAACCCAACTCAACAGCAGTATTTCCAACCAGCAGTAATACCGCAGAATTTTCAGAATGTGCAGTTTGTTCAACAAGCATATCAGAATCAAAATAGTGCATTTGTGCCGACAACACAGAACATACAGAACTTCCAGCAAGCTCAGACGTATGCCGGGCAACCGACTGTCACCCAACAAAATGTAGTGCAAGGTCAGAGTCAACCCATACCGGTAACGCAACCTCAACCCATGGTTAATGGGTTTGCTTATTCACCACAAAATATAACAGAGCAACAGATTGCCGCAAATAATCTTCCTACGCAGGTTGCTAAAAACGTTATATTAAATTCGAATCCTCCCGTTACTCAAGTGGTGCAAAACCAGGTTGTACAGAATCAACAAACAATGCCCATACAGAATCAGGAATCTCAATCGGTTAGTCAAAATTCTGTTCCTCGAACTGTTCCTATGCAAAATCAGCAACTTCCCCCTGAACAGAATCAATCTTACCAGCAGATTCCTCAACATATGAATCCGGTTCTGCAAAATATAAACCCGCTTCAGAATGTAGTTGTACTTCAGGCATATGACCCGAATCAATCGACTGATGTTTATACGAACCCCCAATTTGTGGCAAGCGTGCATAGTTTGCCGATAATGGAAGCGAGTGATGTACATCCCCCAGAAGGCGCTGTTGAAATTTCTCAGGATGCTTTGGGAAACCTGGATGATCCAGCAAAGACGAATCCAGTGGTGAACGCTATTGATAACAAAATAGAGCAAGCTATGGATTTAGTAAAAAGTCATTTAATGTACACGGTTAGAGAGGAGGTAGAGGtattaaaggaaaaaattgcTGAGTTGATGGAGAGGATTCAACAGCTCGAGTCTGAGAATAACTTTTTACGGTCGCAAATTCCTAAAAATAACCCAAATTCGAATGGCACTTCTGAACCATCACCCCAGCAATGA
- Protein Sequence
- MIPGNVDPRRPDKVQRYKPAASGNGNAPGEDLTPDYMNILGPDSTTGNVPGDSKVSENIKNVEAKPSSNLQQQNVQARDDASKTKPEAAPAITTNASNVIPTSPQYGVAIIPTTTTTNDIPAEATTPATDTITESTPKTSETENKDIHSTPSKNDRFKVVKIASSEPFRRGRWKCMDFVDQTPPVTAQQTKTTTQGSTTSVQMAGNVYLQTQSLPPHQIQQLLLQGALTAVPPQFYQGNLQSQVVPQTQYFYPAVQTQGNVQQILNPGVVPSNSMQPQFVNPTQQQYFQPAVIPQNFQNVQFVQQAYQNQNSAFVPTTQNIQNFQQAQTYAGQPTVTQQNVVQGQSQPIPVTQPQPMVNGFAYSPQNITEQQIAANNLPTQVAKNVILNSNPPVTQVVQNQVVQNQQTMPIQNQESQSVSQNSVPRTVPMQNQQLPPEQNQSYQQIPQHMNPVLQNINPLQNVVVLQAYDPNQSTDVYTNPQFVASVHSLPIMEASDVHPPEGAVEISQDALGNLDDPAKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKIAELMERIQQLESENNFLRSQIPKNNPNSNGTSEPSPQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977085;
- 90% Identity
- -
- 80% Identity
- -