Cvid010896.1
Basic Information
- Insect
- Cryptus viduatorius
- Gene Symbol
- -
- Assembly
- GCA_964006125.1
- Location
- OZ023224.1:3376776-3383669[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.25 22 6.1 0.1 1 20 859 878 859 880 0.94 2 12 0.0047 0.42 11.5 0.0 2 20 889 907 888 909 0.93 3 12 0.027 2.4 9.1 0.1 3 23 976 996 974 996 0.96 4 12 0.19 17 6.4 1.8 2 22 1106 1126 1105 1126 0.95 5 12 0.095 8.4 7.4 0.8 2 23 1143 1164 1142 1164 0.95 6 12 8.5 7.6e+02 1.3 0.1 1 11 1175 1185 1175 1191 0.84 7 12 0.0098 0.88 10.5 0.1 1 20 1241 1260 1241 1262 0.92 8 12 0.077 6.9 7.7 0.1 2 22 1286 1306 1285 1308 0.87 9 12 0.58 51 4.9 0.0 1 23 1805 1827 1805 1827 0.96 10 12 0.02 1.7 9.6 1.1 1 23 2192 2216 2192 2216 0.95 11 12 0.31 27 5.8 0.1 1 23 2234 2260 2234 2260 0.96 12 12 0.024 2.1 9.3 0.5 3 20 2264 2281 2263 2283 0.94
Sequence Information
- Coding Sequence
- ATGCGACATTTGTGGAAACACGGCTGCGAAATGAAACGTCGGAAACGTCGGGATCCTCCTCATCAAACACTGCTTTTGCAAATGGATCAAATTTCCGAAGGGATGGAGAAAACCACAAAAGAAGACAAAGCCACAGAGGTAAAACAGATTTCAGATGGTCTTATAGCGAATTCGAACGAAAACGACGAGGGATCGTTAGAGAAAATAAAGGCGACCAACAAGAGTCAGGCGACCAACAAGAGTCAGgaattaaatatcgatcggACTGAGTCGGAAATAGAAGGAAGCGAATTAATTACGAGTAGACACGAAAGCACGTCGGTCACGGAATTGCATAACGCACTGCCCGTGACAACAGTTGGCACCGGGGAAGAGCCTACGAATAAAGTCATCGTCGTTGAAAAACCTGCGGATAATATTCCTAATCCATCCCCCGAACAAATTGACAATTCCTTGTCGCGTAAACATAGCTTGAGACATGCGATATTGCGTAAGAATGACGAGAACCGTAAAATCGTTCAAGCCacgagaaagaggaaaaggtCCTCTCAATCCAACGTCGCTGAGGCGCAGGATACACATAGATTGTTGCAAAATGCAAAAAGATACAAGTCCATGAATGGCGTTGCAATGtgcgacgaaaaaacattACCGGAAGGaagaaacattgaaaaattgccGAACGACATCGTTTCCGTTACGAAGCAAGTTAAGAGCGCCAAATCGAAGAAACGTAATCCGAAGTCCGTCCGTCGACGAAATGACTCTGTTAAAGAAGCGAGAGTTATGCTGACGAAACTTGAATATTTGCTCGATCCTCTGGTTCTGCGATGGACAGAAAAAATGGATCCCAAGCGTTCGAAGGACACAGAAGCAATAACGCGGGTGACTAGTCCGATTGAGAAccgtatcgaagaaaaatctcaaCCTATTGTCATCGAAGAATCTACTAAACACGCTTCGCCCGTAAAAGAAGCTCACGGTGTACCGACGATCCATAATACGGAGCCGGAGGTCGCTATAAACGTCAGTGAGGCTCCAGCAACAATAGTGTGCACGGCGCCAGATACAAACAATTCTGCACCGCTAGACGAAGAAACCCGATCGTCTGGTGCTTTGGCGGAACTTCAGGAAATATCTACTCTTGAAAATGAAGAGAATGACGAGGAAATTATGGAGTTTCTACGTTCGCCGAGAAAGGCAcgactttcgatcgatagttCGAGTACCGACAGTATGTCGAATTATCAAGAAGCCGTGAAAACTCCGATGTTACGCAGAAGTGCAAGAATTCACACGGTGATATCTTCGATAATTGATAGCCCTTATGACTCTGAAGACGTCCCAACGGCTCGGGTACTCCGCAGTCACGCGAAGACTCCTTCGGTAGCTCCCGAGAGGAATCGTCCGGATACTCGAATGTCTCGAATGTTGCGTCCGGCCAATACGCCTTCGATAGATACTCTGGATTCCGAAAGCGTTATTCATCAAAACGAAACACCAAAGACTCCGTCGTTGCGTCATACCGCAACAAGAACATCGATAGATAGCTCGACGACGGAAACGGAAGTAGAGTCTTCGTACAAAAAGCGTACGAAATCCCGGCGACTGGTGGTAGACGACACGAGTTCCGAGAGTACCTACAATCCTGGCGAAGCGTTGACGGATATGTTTGACGACGAAACGCCTACTCCAAAGATGATTAACAATCACAATAACGcagaaaaaactattaatacTGACGGAAGAGAAACAGAATCGCAAGTCGCGACTATTCCAACGAATAAGACTGGAAATGACGCGGATACTGAATGCACTAACGATGGTGTTAACCAAGTAGAAGCGACAACCGAAGTACAGTGCGATTCTTCGGTTAGCGACGATCTATCCGACTCTACGGATCCCGCACCCGCTAATCGTAACGATGCATTgatagcgagaaaaaaattgactgcaTTGAATGCAATGGTTGTTTTAACGAGACTCGCAAATTTTGACGATATTTCCGTCGATGGAATGGAATGCAAAGCCGTCGAAGACTCCTCATGGTTGACAAACTTTCCTCGTGTTACGACAGATGATAATCAAACGTCTGTCGTGACTCGCGACAAGTCGAATTCCAACGACAATCAGATGCCGCCGGACCCACTCGAAATACACGAAAACCACCGAAGTTTGTCTGGCGAGATAAACGACCGAATTGTTGGTTCATCGCCACGAAGAGTCAGTAATTTAAGTGACGTCGATACCGGGaaatattcatcgagaaaatcgtcCCGCATGTTGCAAATACTTACCGACGACATAGACACCAGATCGTCGCAAGACACCGCGGAATCGGACGTCGAATTGTCGCTTGTATTGGAAGATGGCGACAGATCGCCCGATGACTTCAACGTTCAGTCACAAACTTCTGGTGTTGGAGAGTCGGTGAATTCGGGTTGTACTCCTACTGAGGCTATTCTTACAGACGCGAACGGCAACAGTCCGCGTCATCCCCACAGTCATGCGAACCTCGACGAGGAGCGTCGACGCGAAAAGCAGCGTACTACCCACCAAAACACCACGGCGACTCACAAGTGTGTTGTATGCAACGGTCTCTTCGACGATGCAGAGCTTCTTAAGCGGCACAGAGCATCGAGCACCGGTTGCAACGTTGCTCTTCGCTGCGGTATTTGTCAGGCGACTTACAAGACACCATCGGGTTTAGCGAGGCATCGTGCTATTTGCGCTGCAAAATCACCCGAAAAACGCAAAACCGTCGATGAATCAATAAGCAACGAGGCGGAAATCGACAGTCATACTGATCACGACAACACAACGGAAACATTAACTTCAAAAACGAAACAGAAGAAGTcacagacgcaaaaaaaattaccgaaaaaaggCCGTCCGAAAACTCGCGGGCAATCAGAAGAGACGATTTGCAACGTTTGTTCGATCAATTTTGTCACAACTCAAGCGCTTTCCGAACACATTTACACACACAGCCAGGAAGAGAATCAAGAGgcttatagaaaaataaaggagGCGATGAGGCTGGCGAACTCTCAGGCCGCTCGATCGATGTCGGAAAAGGGTGAGAAAACAATTACAGAGAGTGAAGAAGCCGGCAGTAGCACAATAGCCAACGTCGGCGAAGGCAAAGGTTTGCTAAATACATCGAGCGAATCGACGACAAGAGCAATTCGATCCAATAACAGGGAGGTCGTTAACGTTGCAACTGAAAGCGTTACCATATCGGCAACCTGTCCTTGTCACAGGGACGACGCAGAAAGCGCCGATAAAAATGATCTTCAGATCGAAATGGTACTCGTTTGTCAGAAATGTCAGGTACTCTTCCGACGCCGAGAGTGCTTCGAGGTCCACTATCGCACGAGTCCGCGTTGCGCCAACGATCGCTCGAGGGGAAGATTGCCGCGACTTTACTGTGCGAATTGTCAATTAACCCTCGAAAGCTGGAAAAACATGCGGCATCATTTGGAAGTTCACGCGAGCGAAAATCCCGAGGGTACCGTGCGTTTCGTTTGCAACATTTGCCGTGTCGTTTTTGTTGGTTTCGGCGCTTTATTCTACAATCATTGGTTCAGTCATTTGAAAGACACGATGTTTGTCGCTAGTCGTTAcacatttccgaaaaattctgtACAGCCGAAAGACGGATTGGCGAAACTTCCGATCGGTGCGTCCGCCGATGAAACTTACATATGGGTCGCCGAACACGTTTGCGCCAAATGCAAAAAACCTTTTTCAACGAGACCTGATCTCGGCTTGCATCAGGAAATCGACCCTTGTTGCAGCAATGCAGCGATCGGAAATGCGAGCAAAGATCCCGTTGACAGGATAGCGCAATGGTATTGCGACGCGTGCGATTTGGTCTTCAACGATCGTGACAAATTAAACGAACACGGAGTCGTTCGTCATAGCCGTCATTACACCTGCGTATCGACGTCGCCGCAGCAAAAGACTTTCATGTGCACGAAATGTTGCGCTATgagaaaacgaataaaagacATCGAGGAACACTGGAAGACTGATCCGAAACATAACTCATGCCATTTCGATATGGAAATTAACACTGAAACTATTGAAATCGACAACAGCGAACCGGCGGTCATTACACCGGTGGGGAACAAGAATCGAATAGTCGAAAAGTCAACTGCGCCGAAGAACGAACGAGTTGTTTCAAATTCTACGATGCCATCGAGGGATgcggtcgaaaaaaataagtcgcgAAGGAGTGACGCATCGGTGACGAAACGAATCGAGAAAGATAATGTTCGACACGAGAACGACAATGTCTTCCAACCTTCTGTTGTAAATTCACAGAGTGAGAATATTAGTTATACACATAATCAAGAGTCTTCGTTATCGAGTCCACGAGTCAATGATATTGCGAAAACAACCGCTTCGGAGGGGTTGGATAATTTGACGAATGGTGATGCCGCAACGGCTCTGAACGAAGCATCACCGGTGCAAAGGAAATCTTTGGAACAGCAAAGAATGCGATCGCGAGCTCTCGAGGATCCTTCCGTTAACGTCGTGTTGTCGGACTCGTCGAGTACAAAGCTATCAGCGTCGTTGATAATCGACGAATCTCGCGATAGAATTAGCGATGATACTGGCGACGATTCGATTACCGAGTCTTATCGAATATTGATGATGGACAATAATCCAAAATCAACTTCGGGACCGATAAAGATGGTTTTCACCAGAAAGACCGCTTGCAATGCGACGGAAAATGTCAAGGATTCACGGACAGGTGAATCGTTGGATAAATCTAACGGCGAACCGGTTGCCGAAAAGTTTTCACCATCGAAATCAACGTCGGGCGATGCAAACCACGGAAAGTCACTACCGAAGACAACTCTCGAGAAAGCAGTCGTCACTGAGACAGCCGGAGCCGACATGGATAAAACGacggtgaagaaaaataatcatttgtcaaatatatcgaagaacaATGAGATGGATCTTTCGCTTCCAGCATTGTTGAAAAACTCGTCTGGCGTACCGgagattatcgaaataatcgaagaaatcgagtTGGCAAACGAGACTAGTCAAGTGCCAAACGGCGCCTGTTCGTCGGATAGCACCAAAGAATCGACGGCGAAATCGAttagcaaagaaaaaacaaacgttcGAACCACAAAATCGAGtattcgaagcgaaaaaacaaagaattcatcggcggcgaagaaaaaaatgtcgcaggAAAATTCGTCGGGTTCAGAGATAAATTCGGCGACGATGAACGATTCCGGTAAATCCGATATTTCGGATGCAACTTCACATTTTCGACAAGGATCAACATTATCCTTTGAAGAAGCGCGTTATGCCGCTCAGGTATCGAAAAAACAGGGTTTTCTTCGCGTGAAGAATCTATCGGAGTTACaagaggtgaaaaaatacGCGTGTCAGATCTGCGCAGCGAACTTCGAAACGCTCGCCTTACTCGACGAACACAGCCGGCAACACCTACAAGTTTCCTTCGGGAAGATTCAAAAGAATCGTAGAGGAATAGCCGCGGCTCTCTTACTGCCGGATCCCTCTGAATGTCCCAAGACACTCGGACACACAGATCCGAAAAATGTTCAGCAGTCATCTGTGAATCTACCAACACAGTCGTACATTCCTCAAAGACTCTACAATTCACCTATAAGTAACAATACTGTTGGGGGAAATTCATGGATCCGCACAGAGAATCGAAATACAGCAGTGACAAATTCGAAGTCAAATGTACCGAACGCGAATGCCAATGCCGCAAAAAGCGTAACAACATCAACACCGAGTCTCGCGCAgaatcttcaaaatttttctaatcAGTCGCAAACGTTGAATACATCGGTTGGGTACATAGCGGTACCGGATATTCAACGGCAGCTTTCCGAAGTTCGTACCAGCGGACAAATAGGTTATCACTTATTACCGGCAATGGTTCTGCCGTCGTCGCAGAGCACCAAACAACCGATCGTCGTAGCTTCGCAGCAAAATACTTCCAGCATCAATCTTCCAACGAGCGGCTTGACCACCGTCTCGTCGAATAATCAACAGCAGATAAGTATAAGTAAATTAGTTTGCACTATATGCACTACATTTCGATGCGACACGATGGACGCTTTCAACGAGCACATAACGAAGCATTTGGTTGGTTTCAATAATGCTAACACCGCTCAGAATGCACCACAGTCCGCACTCTCGACGGTCATCGTGCCACAAGTTTCGTCAATTCGGACGACAAACGAGTCTGTGTCGGGCAGTATCGTGGAATCGAAAAGTAACAACGATCGCCTGGTCGTTAACAATTGGATATTGCAAAGTCCACCTATAAGTTGGCCGAATTCGACGTTCAGCCAACAGTCCGCTTCTTCCGTTCTTCCTATGACTACGCAACCGCTATTGACTACGACGGTTCAAAATTCCAACGGCAACGGTACGAATACAGCAAAATCCGGTACGATATGGACGCCGCCAAATTCGAACAACAACAGTACAAATGCATTGAAACAGTCCGCAGGATGGGTATCGTCGGCTTTGAACACCGGTGAGATAATCGGCGGTCAGATCGTCTATCAATGCAAAATCTGCAAAACCGCGATGTACAGCGACTACGAACATCTTCGGAGACACGTACTCGTCGTTCACGgtgtcgataattttttgaaatctcGCATAGAAAACATTGTACaaaagtattattattgtacacGTTGTCAGAACGGCGCAGAACCGTTCGATTCAGCGGCAAAATTGACGATGCATCAAAATACCGGTCACGCGAACATTTGCCCGACGTGCAACCGCACTTTCCACAATTACATTTATCTCACCGATCACATAGCTCATTGTCGTACGAACAATAGTCACGGAAACTTCGACGGCAATTGCTGA
- Protein Sequence
- MRHLWKHGCEMKRRKRRDPPHQTLLLQMDQISEGMEKTTKEDKATEVKQISDGLIANSNENDEGSLEKIKATNKSQATNKSQELNIDRTESEIEGSELITSRHESTSVTELHNALPVTTVGTGEEPTNKVIVVEKPADNIPNPSPEQIDNSLSRKHSLRHAILRKNDENRKIVQATRKRKRSSQSNVAEAQDTHRLLQNAKRYKSMNGVAMCDEKTLPEGRNIEKLPNDIVSVTKQVKSAKSKKRNPKSVRRRNDSVKEARVMLTKLEYLLDPLVLRWTEKMDPKRSKDTEAITRVTSPIENRIEEKSQPIVIEESTKHASPVKEAHGVPTIHNTEPEVAINVSEAPATIVCTAPDTNNSAPLDEETRSSGALAELQEISTLENEENDEEIMEFLRSPRKARLSIDSSSTDSMSNYQEAVKTPMLRRSARIHTVISSIIDSPYDSEDVPTARVLRSHAKTPSVAPERNRPDTRMSRMLRPANTPSIDTLDSESVIHQNETPKTPSLRHTATRTSIDSSTTETEVESSYKKRTKSRRLVVDDTSSESTYNPGEALTDMFDDETPTPKMINNHNNAEKTINTDGRETESQVATIPTNKTGNDADTECTNDGVNQVEATTEVQCDSSVSDDLSDSTDPAPANRNDALIARKKLTALNAMVVLTRLANFDDISVDGMECKAVEDSSWLTNFPRVTTDDNQTSVVTRDKSNSNDNQMPPDPLEIHENHRSLSGEINDRIVGSSPRRVSNLSDVDTGKYSSRKSSRMLQILTDDIDTRSSQDTAESDVELSLVLEDGDRSPDDFNVQSQTSGVGESVNSGCTPTEAILTDANGNSPRHPHSHANLDEERRREKQRTTHQNTTATHKCVVCNGLFDDAELLKRHRASSTGCNVALRCGICQATYKTPSGLARHRAICAAKSPEKRKTVDESISNEAEIDSHTDHDNTTETLTSKTKQKKSQTQKKLPKKGRPKTRGQSEETICNVCSINFVTTQALSEHIYTHSQEENQEAYRKIKEAMRLANSQAARSMSEKGEKTITESEEAGSSTIANVGEGKGLLNTSSESTTRAIRSNNREVVNVATESVTISATCPCHRDDAESADKNDLQIEMVLVCQKCQVLFRRRECFEVHYRTSPRCANDRSRGRLPRLYCANCQLTLESWKNMRHHLEVHASENPEGTVRFVCNICRVVFVGFGALFYNHWFSHLKDTMFVASRYTFPKNSVQPKDGLAKLPIGASADETYIWVAEHVCAKCKKPFSTRPDLGLHQEIDPCCSNAAIGNASKDPVDRIAQWYCDACDLVFNDRDKLNEHGVVRHSRHYTCVSTSPQQKTFMCTKCCAMRKRIKDIEEHWKTDPKHNSCHFDMEINTETIEIDNSEPAVITPVGNKNRIVEKSTAPKNERVVSNSTMPSRDAVEKNKSRRSDASVTKRIEKDNVRHENDNVFQPSVVNSQSENISYTHNQESSLSSPRVNDIAKTTASEGLDNLTNGDAATALNEASPVQRKSLEQQRMRSRALEDPSVNVVLSDSSSTKLSASLIIDESRDRISDDTGDDSITESYRILMMDNNPKSTSGPIKMVFTRKTACNATENVKDSRTGESLDKSNGEPVAEKFSPSKSTSGDANHGKSLPKTTLEKAVVTETAGADMDKTTVKKNNHLSNISKNNEMDLSLPALLKNSSGVPEIIEIIEEIELANETSQVPNGACSSDSTKESTAKSISKEKTNVRTTKSSIRSEKTKNSSAAKKKMSQENSSGSEINSATMNDSGKSDISDATSHFRQGSTLSFEEARYAAQVSKKQGFLRVKNLSELQEVKKYACQICAANFETLALLDEHSRQHLQVSFGKIQKNRRGIAAALLLPDPSECPKTLGHTDPKNVQQSSVNLPTQSYIPQRLYNSPISNNTVGGNSWIRTENRNTAVTNSKSNVPNANANAAKSVTTSTPSLAQNLQNFSNQSQTLNTSVGYIAVPDIQRQLSEVRTSGQIGYHLLPAMVLPSSQSTKQPIVVASQQNTSSINLPTSGLTTVSSNNQQQISISKLVCTICTTFRCDTMDAFNEHITKHLVGFNNANTAQNAPQSALSTVIVPQVSSIRTTNESVSGSIVESKSNNDRLVVNNWILQSPPISWPNSTFSQQSASSVLPMTTQPLLTTTVQNSNGNGTNTAKSGTIWTPPNSNNNSTNALKQSAGWVSSALNTGEIIGGQIVYQCKICKTAMYSDYEHLRRHVLVVHGVDNFLKSRIENIVQKYYYCTRCQNGAEPFDSAAKLTMHQNTGHANICPTCNRTFHNYIYLTDHIAHCRTNNSHGNFDGNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397651;
- 90% Identity
- -
- 80% Identity
- -