Carm024158.1
Basic Information
- Insect
- Cryptus armator
- Gene Symbol
- -
- Assembly
- GCA_963971235.1
- Location
- OZ020234.1:23704202-23711242[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.65 96 4.8 0.1 1 20 907 926 907 928 0.94 2 12 0.012 1.8 10.2 0.0 2 20 937 955 936 957 0.93 3 12 0.032 4.7 8.9 0.1 3 23 1024 1044 1023 1044 0.97 4 12 0.2 30 6.4 1.8 2 22 1154 1174 1153 1174 0.95 5 12 0.45 66 5.3 0.9 2 23 1191 1212 1190 1212 0.95 6 12 8.8 1.3e+03 1.2 0.1 1 11 1223 1233 1223 1239 0.84 7 12 0.01 1.5 10.5 0.1 1 20 1289 1308 1289 1310 0.92 8 12 0.013 2 10.1 0.1 2 22 1334 1354 1333 1356 0.88 9 12 0.19 28 6.5 0.2 1 23 1854 1876 1854 1876 0.96 10 12 0.02 3 9.5 1.1 1 23 2241 2265 2241 2265 0.95 11 12 3.8 5.6e+02 2.4 0.1 1 23 2283 2309 2283 2309 0.89 12 12 0.013 1.9 10.1 1.3 3 20 2313 2330 2312 2332 0.94
Sequence Information
- Coding Sequence
- ATGGAGAgcggtaaaaagaaaaataggaaCGCCAAAATTAACAAAGCTGAGAATAAGCCTGTCGACGATTTGTTGCAAATCTGCAAGCCTCTGTCGGTAAACATGACACGTTTGCCTACATTGGTGTTGAACAAGTACGCGGGGACTTCCAGAGCcgaggtaaaaaataaaaatcccatTCGCAAAATGCGAAATTTGTGGAAACACGGCAATGAAATAAAACGTCGGAAACGTCGGGATCCGGCGCATCAAACACCGCTTTTGCAAACGGGTGAAATTTCCGaagtgaagaagaaaaacgtgaaagaaGACAAAGCCACAGAGATAAAACAGATTTCAGACGGTGTTAAAACGAATTCGAACGAACACGACGAGGGATCGCCAGAGAAAATAAAGGCGGCCATCGAGAGTGACGAATTAAATATCGATCGGACTGAGTCGGAAGTAGAAGCAAGCGAATTAACTCCGAGTAGACACGAAACTACGTCGGTCACGGAATTACATAACGCACTGTCAGTCGCAGCAGTTGGCGCCGGGGAAGAGTCTACGAATAAAGTCGTTGCCGTGGAAAAACCTGCTGATAATACTCCTGATCCATCCTCCGAACAAATTGATAATTCCCTGTCGCGTAAACAAAGCTTGAGACATGCGATAACGCGCAAGAACGACAAGAACCGAACAATCGTTCGAAACATGGGAAAGAGAAAAAGGTCCTCGCAATCCAACGACGCTGAGGCGCAGGATACACATAGATTGTTGCAGGATACAAAAAGATACAAGTCCATGGATGGCGTTGCAATGTGCGACGAAAAAACATTGCCGGAAggaagaaacatcgaaaaatcgccGAACGACATCGTTTCCGATACGAAGCAAATTAAGAGCGCCAAATCGAAAAGACATAATCCGAAGTCCGTTCGTCGACGAGGTGACTTCGTTAAAGAAGCGAGAGTTATGCTGACGAAACTTGAATATTTGCTTGATCCTCTGGTTCTGCGATGGACAGAAAAAACGGGTCCCGAGCTTTCGAAGGACGCAGAAGCAACAACGCGTGTGACTAGTCCGATCGACAAACGCATCGAAGAAAAATCTCAATCAATTGCCATCGAAGAATCTCCTAAACAAGCATCGCCTGTAAAAGAATCTCACGGTGTACCGACGATCCATAATACGGAGCCGGAGGTCGGTATAAATGTTAACGAGACTCCGGCAACGATTGTGTGCGCAGCGCCAGATACAAACAATTTTACACCGCTCGACGAAGAAATCCGATCGTCCGGTGCTTTGGCGGAACTTCAGGAAAGATCTACACTCGAAAATGAAGAGAATGACGAGGAAATTATGGAGTTTCTACGTTCGCCGAGAAAGTCACGACGTTCGATCGATAGTTCGAGTACCGAAAGTATGTCGAATTATCAGGAAGCCGCAAAAACTCCGATGTTGCGCAGAAGCGCAAGAATTCACACGGTGATATCTTCGATAATCGATAGCCCTTCGGACTCCGAAGAAGTCCTAACGGCTCGGGTACTCCGCAGCCGCGCGAAGACTCCTTCGGTAGTTCCCGAGAGGACTCGTCCGGATACTCGAATGTCTCGAATGTTGCGTCGAGCGAATACGCCTGCAACAGATACTCTACATTCCGAAAGCGCTGTTCATCAAAACGAAATTCCAAAGACTCCGCCGTTGCGTGATACCGCAATCAGAACATCGATAGACAGCTCGACGACGAAAATCGAGGTTGAGCCTTCGTACGAAATGCGTACGAAATCCCGGCGATTGGTGATAGACGACACGAGTTCCGAGAGCACTTACAATCCTGGCGAAGCGTTGACGGATATGTTTGACGACGTAACGCCTACTCCGATGCTAATCAACAATCACAATAGCGGAGAAAAAACTATAAATACTCACGGAAGAGAAACAGAACCACGAGCCGTGAATATACCAACGGAAAAGACTGTAAATAACGAGAATAGTGAATACACTAACGATGGCGTTAGCCAAGTGGAAGCGATAACCGAAGTACAGTGCGATTCTTTGGTTAGCGACGATCTGTCCAACTCTACGGATCCCGCGTCCGCTAACCGTAACGATGCATtgatagcgagaaaaaaattgacggcATTGAATGCAATGGTTGTTTTGACGAGACTCGAAAATTTTGACGATATTTCCGTCGATGGAATGGAATGCAAAAACGTCGAAGACTCCTCATGGTTGACAAACTTTTCTCCCGTTACGACAGATGATAATCGAATGAGTGTCGTGACTCGCGTCAATTCGAATTCCAACGACGATCAGATACCGCCGGATCCACTCGAAATACACGAAGACCACGGAAGTTTGTCTGGCGAGATAAACGAGCCAATTGTTGGTTTATCCCCACGGCGAATCGGCAATCTTAGTAACGTCGATGCCGGGAAATCTTCATCGAGAAAATCGTCTCGCATTCTGCAAATACTTACCGATGACACAGACACCAGATCGTCGCAAGACACCGCGGAATCGGACGTCGAACTGTCGCTTGTATTGGAAGATGGCGACAGATCGCCCGATGACTTTAACGACCAGTCGCAAACTTCTGGCGTGGGAGAGTCCGTGAACTCGGGTTGTACTCCTACTGAGGCTATTCTTACCGACGCGAACGGCAAGAGTTCCCACGGAGAGGAGCGTCAACGCGACAAGCAGCGTACCACTACCCAGAACATCACGGCGACTCACAAGTGTGTTGGATGCAACGGTCTCTTCGACGATGCAGAGCTTCTCAAACAGCACAGAGCATCGAGCGCCGGTTGTAACGTTGATCTTCGCTGCGCTATTTGCCAGGCGACCTACAAAACAGCATCGGGTTTGGCGAGGCATCGTGCTATCTGCGCCGCGAAATCATCGGAAAAACGCAAATCTGTCGACGAATCAACGATCAACGAGGCGGACATCGACAGCCATACCGATCACGACAACACAATGGAAACATTAACTTCGAAGACGAAACAGAAGAAGTCACAGACGCAAAAGAAACTACCGAAAAAAGGCCGTCCGAAAACCCGCGTTCAATCGGAAGAGGCGATATGCAACGTTTGTTCGATCAATTTTGTCACAACTCAAGCGCTTTCGGAACACATTTACACACACAGCCAGGAGGAGAATCAAGAAGCttatagaaaaataaaggaGGCGATGATGCTGGCGGAATCTCAGGCCGCTCGTTCGATTTCGGAAAAGGCTAAGGAAACGATTGCGGAGAGTGAAGAAGCCGGCAGTAGCACAATTGCCAACGTCGGCGAAGGCACAGGCTTGCTAAATAAATCGAACGAATCGACGACAAGAGCAATCCGATCCAATAACAGGGCGGACGTTAACGTTGCAACTGAAAGCGTTACGATATCGGGAACCTGTCCTTGTCACAGGGACGACGAAGAAAGCGCCGATAAAAATGATCTTCAGATCGAAATGGTACTCGTCTGTCAGAAATGTCAGGTACTCTTCCGACGCCGAGAGTGCTTCGAGGTCCACTATCGCACGAGTCCGCGTTGCGCCAACGATCGCTCGCGGGGAAGATTGCCGCGACTTTACTGCGCGAATTGTCAATCAACCCTCGAAAGCTGGAAAAACATGCGACATCATTTGGAAGTTCACGCGAGCGAAAATCCCGAGGGTACCGTGCGTTTCGTTTGCAACATTTGCCGTGTCGTTTTCGTTGGTTTCGGCGCTTTATTCTACAATCATTGGTTCAGTCATTTGAAAGACACGATGTTTGTCGCTAGTCGTTAcacatttccgaaaaattctgTACAACCGAAAGACGGATTGGCCAAACTTCCGATCGGTGCGTCCGCCGATGAAACTTACATATGGGTCGCCGAACACGTTTGCGCCAAATGCAAAAAACCTTTTTCAACGAGACCCGATCTCGGTTTGCATCAGGAAATCGATCCTTGTTGCAACAACACAGCGAGTGGAAACGCGAGCAAAGAACCCGTTAACAACGTAGCGCAATGGTATTGCGACGTGTGCGACTTAGTCTTCGACGATCGTGACAAATTAAACGAACACGGAGTCGTTCGTCATAGCCGTCATTACACCTGCGTGTCGACGTCGCCGCAGCAAAAGACTTTCATGTGCACGAAATGTTGCGCGATGAGAAAACGAATAAAGGAGATCGAGGAACACTGGAAGACTGATCCGAAACATAACTCGTGTCGCTTCGATATGGAAATTAACACCGAAACTATGGAAATCGATAACAGCGAACCGGCGATCATTACACCGGTGGGGAACAAGAATCGAATAGTCGAAAAGTCAACTGCGCCGAATGACGAACGAGTTGTTTCAAATTCTACGATACCATCGAGGGATGCGGTCGAAAAAGATAAGTCGCGAAGGAGCGACACGTCGGTGACAAAAAGAATCGAGAAAGATAATGTTCGACACGAGAATGACAATGTCTTCCAACCTTCTGTTGTAAATTCACAGAGTGAGAATATTAGTTATACGGATAATCAAGAGTCTTCGTTATCGAGTCCGCGAGTCAATGAAATTGCGAAAACAACTGCTTCGGAGGTGTTGGATAATTTAACGAATGGTGACGCCGCAACGGCTCTTAACGAAACGTCGTCGGTGAGTAAATCTTTGGAAAAGCAGAAAATGCGATCGcgatcgcgagctctcgagGATCCTTCCGTGAACGTCGTATTGTCGGACTCTTCGAGTACAAAGCTATCAGCGTCGTTGGTAATCGACGAATCTCGCGATAGAATCAGCGATGATACTGGCGACGATTCGGTTACCGAGTCTTATCGAATATTGATGATGGACAATAATCCGAAATCAACTTCGGGACCGATAAAGATGGTTTTCACCAGAAAGTCCTCTTGCAATGCGACGGAAAATTTGAGGAATTCACGAACAGGTGAATCGTTGGATAAATCTAACGGCGAAACGGTTGCCGAAAAGTGTACACCATCGAAATCAACGTCGGGCGGTGCAAACGACGGAAAGTCACTTCCGAAGAAATCTCTCGAGAAAGCAGTCGCCACTGATACAGCCGGAGCCGAAGCGGAAAAAACGACAGGGAAGAAGAATAATGATTCGTCGAATATACCGAAGAGTAATGAGATGGATCTTTCGCTACCAGCATTGTTGAAAAACAAGTCCGGCGTACCAGAGATTATTGAAATAATCGAAGAAATCGAGTTGGCAAACGAGACTAGTCAAGTGCCAGACAACGCGTATTCGTCGAGTAGCACCAATGTCTCGACGGCAAAATCGATTAACAAAGGAAAAACAAACGTTCGAAGCAAAAAATCGAGCGTTCGAAGCGACAAATCGAAGAATTTATcggcgacgaagaaaaaaatgtcgcagGGAAATTCGTCGGGTTCGGAGATAAATTCAACGACGATGAACGATTCCGGTAAATCGGATAATTCGGACGCAAATTCACAATTTCGACGAGGATCAACATTATCCTTCGAAGAAGCGCGTTACGCCGCTCAGGTATCGAAAAAACAGGGTTTTCTTCGCGTGAAGAATCTATCGGAGTTACAAGAGGTGAAAAAATACGCGTGTCAGATCTGCGCAGCGAGCTTCGAAACGCTCGCCTTACTCGACGAACACAGCCGACATCATCTACAAATTTCCTTCGGGAAGTTTCAAAAGAATCGTAGAGGAATAGCCGCGGCTCTCTTATTGCCGGAACCCTCTGAATGTCCCCCCAAGACACTCGGGCGCACAGATCCGAAAAATGTCATGCAGTCATCTGCGACTCTCCCAACACAGTCGTTCATTCCTCAAAGAATCTACAATACCGCGGGTAACAATTCCGGTGCGGGAAATTCTTGGATCCGCATCGAGAATCGAAATACAACAGTGACGAATTCACAGTCAAACGCACCGAACGTGAATGCCGATGCCGCAAAAAGCGTAATAACGTCAACAGCGAGTCTCGCGCAGAGTCAACAAAATTTTTCGAATCAGTCGCAAACGTTGAACACACCGGTTGGGTACATAGCGGTGCCGGATATTCACCGACAGCTTTCCGAGGTTCGTACCAGCGGACAAATAGGTTATCACATATTACCGGCGATGGTTCTGCCGTCGTCGCAGAGCACCAAACAACCGATCGCCGTAGCTTCGCAGCAAAATACTTCCAGCATCAATCTTCCAACGAGCGGCTTGACCACCGTCTCGTCGCTTAATCAACAGCAGATAAGTATAAGTAAATTAGTTTGCACTATATGCACTACATTTCGATGCGACACGATGGACGCTTTCAACGAGCATATAACTAAGCATTTGGTTGGTTTCAACAATGCCAACACCGCTCAGAATGCGCCACAGTCCGCACTCTCGACGGTCACCGTGCCGCAAGGTTCGTCCGTTCGTACGGCAAACGAGACTGCGCCGGACAGTATCGCCGAATCGAAAAGTAACAACGATCGTTTGGTCGTTAACAATTGGATATTGCAAAGTCCACCCATAAGTTGGCCGAATTCGACGTTCAGCCAACAAACCGCATCTTCCGTTCTTCCTATGACTACGCAACCGCTTTTGACTACTACGGTTCAAAATTCAAACGGCAACGGCACGAATACAGCAAAATCCGCTCCAATATGGATGCCGCCAAATTCGAACAACAACGGTACAAATGCATTGAAACAGTCCGCAGGATGGGTATCGTCGGCTTTCAACACCGGCGAGATAATCGGCGGTCAGATCGTCTATCAATGCAAAATCTGCAAAACCGCGATGTACAGCGACTACGAACATCTTCGCAGACACGTACTCGTTGTTCACGgtgtcgataattttttgaaatctcGCATAGAAAATATTGTACAAAAGTATTATTATTGTACACGTTGTCCGAACGGTGTAGAACTGTTTGATTCGGTAGCGAAATTGACGACGCATCAAAATACCGGTCACGCGAACATTTGCCCGACGTGCAATCGCACTTTCCACAATTATATTCATCTCACCGATCACATAGCTCATTGTCGTACGAGCAATAGTCACGGAAACTTCGACGGTAGTTGTTGA
- Protein Sequence
- MESGKKKNRNAKINKAENKPVDDLLQICKPLSVNMTRLPTLVLNKYAGTSRAEVKNKNPIRKMRNLWKHGNEIKRRKRRDPAHQTPLLQTGEISEVKKKNVKEDKATEIKQISDGVKTNSNEHDEGSPEKIKAAIESDELNIDRTESEVEASELTPSRHETTSVTELHNALSVAAVGAGEESTNKVVAVEKPADNTPDPSSEQIDNSLSRKQSLRHAITRKNDKNRTIVRNMGKRKRSSQSNDAEAQDTHRLLQDTKRYKSMDGVAMCDEKTLPEGRNIEKSPNDIVSDTKQIKSAKSKRHNPKSVRRRGDFVKEARVMLTKLEYLLDPLVLRWTEKTGPELSKDAEATTRVTSPIDKRIEEKSQSIAIEESPKQASPVKESHGVPTIHNTEPEVGINVNETPATIVCAAPDTNNFTPLDEEIRSSGALAELQERSTLENEENDEEIMEFLRSPRKSRRSIDSSSTESMSNYQEAAKTPMLRRSARIHTVISSIIDSPSDSEEVLTARVLRSRAKTPSVVPERTRPDTRMSRMLRRANTPATDTLHSESAVHQNEIPKTPPLRDTAIRTSIDSSTTKIEVEPSYEMRTKSRRLVIDDTSSESTYNPGEALTDMFDDVTPTPMLINNHNSGEKTINTHGRETEPRAVNIPTEKTVNNENSEYTNDGVSQVEAITEVQCDSLVSDDLSNSTDPASANRNDALIARKKLTALNAMVVLTRLENFDDISVDGMECKNVEDSSWLTNFSPVTTDDNRMSVVTRVNSNSNDDQIPPDPLEIHEDHGSLSGEINEPIVGLSPRRIGNLSNVDAGKSSSRKSSRILQILTDDTDTRSSQDTAESDVELSLVLEDGDRSPDDFNDQSQTSGVGESVNSGCTPTEAILTDANGKSSHGEERQRDKQRTTTQNITATHKCVGCNGLFDDAELLKQHRASSAGCNVDLRCAICQATYKTASGLARHRAICAAKSSEKRKSVDESTINEADIDSHTDHDNTMETLTSKTKQKKSQTQKKLPKKGRPKTRVQSEEAICNVCSINFVTTQALSEHIYTHSQEENQEAYRKIKEAMMLAESQAARSISEKAKETIAESEEAGSSTIANVGEGTGLLNKSNESTTRAIRSNNRADVNVATESVTISGTCPCHRDDEESADKNDLQIEMVLVCQKCQVLFRRRECFEVHYRTSPRCANDRSRGRLPRLYCANCQSTLESWKNMRHHLEVHASENPEGTVRFVCNICRVVFVGFGALFYNHWFSHLKDTMFVASRYTFPKNSVQPKDGLAKLPIGASADETYIWVAEHVCAKCKKPFSTRPDLGLHQEIDPCCNNTASGNASKEPVNNVAQWYCDVCDLVFDDRDKLNEHGVVRHSRHYTCVSTSPQQKTFMCTKCCAMRKRIKEIEEHWKTDPKHNSCRFDMEINTETMEIDNSEPAIITPVGNKNRIVEKSTAPNDERVVSNSTIPSRDAVEKDKSRRSDTSVTKRIEKDNVRHENDNVFQPSVVNSQSENISYTDNQESSLSSPRVNEIAKTTASEVLDNLTNGDAATALNETSSVSKSLEKQKMRSRSRALEDPSVNVVLSDSSSTKLSASLVIDESRDRISDDTGDDSVTESYRILMMDNNPKSTSGPIKMVFTRKSSCNATENLRNSRTGESLDKSNGETVAEKCTPSKSTSGGANDGKSLPKKSLEKAVATDTAGAEAEKTTGKKNNDSSNIPKSNEMDLSLPALLKNKSGVPEIIEIIEEIELANETSQVPDNAYSSSSTNVSTAKSINKGKTNVRSKKSSVRSDKSKNLSATKKKMSQGNSSGSEINSTTMNDSGKSDNSDANSQFRRGSTLSFEEARYAAQVSKKQGFLRVKNLSELQEVKKYACQICAASFETLALLDEHSRHHLQISFGKFQKNRRGIAAALLLPEPSECPPKTLGRTDPKNVMQSSATLPTQSFIPQRIYNTAGNNSGAGNSWIRIENRNTTVTNSQSNAPNVNADAAKSVITSTASLAQSQQNFSNQSQTLNTPVGYIAVPDIHRQLSEVRTSGQIGYHILPAMVLPSSQSTKQPIAVASQQNTSSINLPTSGLTTVSSLNQQQISISKLVCTICTTFRCDTMDAFNEHITKHLVGFNNANTAQNAPQSALSTVTVPQGSSVRTANETAPDSIAESKSNNDRLVVNNWILQSPPISWPNSTFSQQTASSVLPMTTQPLLTTTVQNSNGNGTNTAKSAPIWMPPNSNNNGTNALKQSAGWVSSAFNTGEIIGGQIVYQCKICKTAMYSDYEHLRRHVLVVHGVDNFLKSRIENIVQKYYYCTRCPNGVELFDSVAKLTTHQNTGHANICPTCNRTFHNYIHLTDHIAHCRTSNSHGNFDGSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00398413;
- 90% Identity
- -
- 80% Identity
- -