Basic Information

Insect: Cryptus viduatorius
Gene Symbol: Prdm15
Assembly: GCA_964006125.1
Location: OZ023222.1:3380564-3385087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.1 99 4.0 0.0 2 23 244 265 243 265 0.94

2 14 0.00038 0.034 15.0 1.9 3 23 274 295 273 295 0.96

3 14 1.9e-05 0.0017 19.0 1.8 2 23 458 479 457 479 0.97

4 14 0.00066 0.059 14.2 0.6 1 20 483 502 483 503 0.96

5 14 2.9e-05 0.0026 18.5 3.1 1 23 513 535 513 535 0.98

6 14 3.5 3.2e+02 2.5 0.6 2 20 540 558 540 560 0.92

7 14 2.3e-05 0.0021 18.8 5.9 1 23 564 586 564 586 0.97

8 14 1.7e-05 0.0015 19.2 1.2 3 23 609 629 608 629 0.98

9 14 0.24 21 6.1 2.3 1 23 634 656 634 656 0.96

10 14 0.0011 0.099 13.5 0.1 2 23 662 683 661 683 0.95

11 14 0.0015 0.14 13.0 5.5 1 23 688 711 688 711 0.95

12 14 0.0039 0.35 11.8 6.4 1 23 717 739 717 739 0.97

13 14 0.009 0.8 10.6 9.2 1 23 745 768 745 768 0.96

14 14 0.051 4.6 8.2 4.7 1 23 773 796 773 796 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.1	99	4.0	0.0	2	23	244	265	243	265	0.94
2	14	0.00038	0.034	15.0	1.9	3	23	274	295	273	295	0.96
3	14	1.9e-05	0.0017	19.0	1.8	2	23	458	479	457	479	0.97
4	14	0.00066	0.059	14.2	0.6	1	20	483	502	483	503	0.96
5	14	2.9e-05	0.0026	18.5	3.1	1	23	513	535	513	535	0.98
6	14	3.5	3.2e+02	2.5	0.6	2	20	540	558	540	560	0.92
7	14	2.3e-05	0.0021	18.8	5.9	1	23	564	586	564	586	0.97
8	14	1.7e-05	0.0015	19.2	1.2	3	23	609	629	608	629	0.98
9	14	0.24	21	6.1	2.3	1	23	634	656	634	656	0.96
10	14	0.0011	0.099	13.5	0.1	2	23	662	683	661	683	0.95
11	14	0.0015	0.14	13.0	5.5	1	23	688	711	688	711	0.95
12	14	0.0039	0.35	11.8	6.4	1	23	717	739	717	739	0.97
13	14	0.009	0.8	10.6	9.2	1	23	745	768	745	768	0.96
14	14	0.051	4.6	8.2	4.7	1	23	773	796	773	796	0.95

Sequence Information

Coding Sequence: ATGATGAATAAACCGGCTACTGGCGACACTGAACAGAATAAGGAAAGCGCGAGCGAAACTTACTTGTCAGCTTGCAGCATTTGCAACCAACAACACGATACCAACAGCTGTTCGTTCTTCCTTGCTTTTCGTCATgTCAAAGATGAGCCTCTCGTGTCAAAAGCGAGACAAACGCTTccaaaaaagttggaaatcaCGAAAATGGCGGACGATTCGTTTACCGTTGTTGCAAAGCAAGATTTTCCACAGGGAACAACCTTCGGTCCTTTCGAAGCCAAACGCGACTGGGCAATGAATCCTATGAGCGATTTTCCCATAAAAGTTTTTGGCAACGGCAAAGTTGATACCTACCACTTGGATTACTCGGATGAAGAAACCTCCAACTGGATGTGTTTTGTGTCCCCAGCATCCAATGCGAGAGAACAAAATCTCATCTGTTATCAGCTGGAAGGGGAAATATTTTACACTGCTATGCGCTTAATTCCTGCGGGTGAAGAGCTCAGAGTTTGGTACGCGCCTTCCTATgctcaaaaaatgaaaatgccgCTCTATAACACGGAATTTGCAACTATAAGCGCCGCGTTTCGCGTTTCGGAAACCGAGGAATCGTCGACGCCAGACGAGAACGCGAAAATCGATGGAACAGAATTCTCGAGTCAAACTATACGGGAAATAACGGAATGCATGCCGGCCGAACAGCTCGGAACTCAAAAAGACGAAACCAACTGGAACTGCAAAATTTGCTCGATCGTTATAGCTTCGGTAAATGCGTATGCAAAACACTTGATGGAACACTATAAACCGTTCTTGGGTGTGTTCTGCGATATTTGCAACAAGAAATTTTATAGGCTTTCGGTTTTAGAAAAACACAAACGTCTGAAGCATCCGGAGGGTTTACCGACGAGCGACGTCGTGGGAATTCCAACCTCGGAAAATCAACAGCAACAGAATGCACAGACGATACTCATGAATATGAGCGATTCAGAGAACGAAACGTCGGAAGCAATGAAAGATATTTTAGAAAAGTTTAAGGCCGGCAAAGCAATAACGGAGAGTACGTTATTACTTTCGCCTATGGAAACCGAGAAAGAAACTCAAAACGAATTGCCTCTACTGGACACGAACTCCATAAACGTGAATGATCTTTTACAAAACAACGGTACTCTCTCGATGGAAAATTCATCGCTTAAATTGATTCTGGAGAATCAATGTTTGAATATGAATCTCGGACTCGGAACAATGACCGATTCAATCCTTTCGGAGAACATAACAGGTGTTGATTCGGTGAAATTCAACGTCGAAGAATTGGCCTCCGAGTTGCTCGACATAACTCCCGACGTTGAGAATATAAATCGTCGCGTCGACAATCTCGAGTGCGATATATGCGAGAAAAAGTTCGACAAAGCGGATTATCTTCATCGGCATTTGAGAAAACATACCGGTGAATTTACCTGTTCGGTCTGTTCGAACGTGTTCGCGAGAAAGGAGAACTTAGTATCGCATATTTGTCCATCGCAGCAACTCGAACGGCATAATTATGAGTGTCTTTATTGTCAGAAGcgtttcgtaatgaaaaaatatctgaAACGTCACATGGTGAAACACACGGGATGGAATACCTGCAAATGGTGTCGAAGTTTATTCGATACGCGGCCGGAGCTCGAGGCTCACGAATGCCAAGCGCCGAAGCACGTTTGCTCCCAATGCGGCAAACGTTTCGTTCATCGCGCACATCTCAATCGTCACGCGAAATCTCACGCGAACCCTAAGCCAGCAGCcacaaagagaagaaaaaaatctacacTGCCCGACAAACCAGCGATATGCGAAAAGTGCGGCGACGTCTTCAAAAATCCTCATAACTTAAACCAACACTTGCGTTCTcacgGGGAAAAGCAATTCGAATGCGACGTGTGTCACAGTAGATTTCATCGGATCGGCGTCCTAAAACAGCACAAAGCGATACATCAAACAGTTCAAATACCTTGCCAAgtgtgtggaaaaaaattgaagagcaAAAAAGCTCTAAGCGTTCACGTTCTTCTGcacgggaataaaaaattcgattgcgaAAAGTGCGATAAAAGTTTCTTTCAAAGATGCAATTATCTGAAGCATTACAAACAAGTTCACAGCGACAAAGTAACGCACAAGTGTCCTCACTGTCCGACGCAATTCACGAACGAACAGAGTTTCCACAAACACGTGGAGAGCCACGTGAAACCGGCGCAACATTCTTGTTCGTCGTGCCACAAAGTTTTCCACCGAGAATACCAGCTGAAGCGCCACTTCCAAACGAATCACAGCGGTATAATATTTCGTTGTCCGTATTGCAAAATGACTGCAAGATATCGTCACAGTATGAGACGTCATTTCGAACGTCAGCACAAGAGTCTTAGCGACGATTGGGACAAACCCGGCTTTGTCAATGACCTCATTGAAAAAACATCATCGGTGTTAATCGGGGAACAAGTTATCGCAAAGGATCGTGATAACGCGGTGATGCAAGTGGCTTACGGGGACGTTAACGGTGCGAAATTCGAAGctcaaaaaaatgatggtGAATTAATATTGTCGGTGTCTGGATTGGCAAATCAATTTACCGATCAAGCGAAGGTTCCGGCGCAAAGCGGCGATGATTTAGCACAAAATTCGCTGAATGGTCAAGAGATTTTACTCCAAGTCTCGGAGATCTGCCAGTCGGAACCCGCGATAGCGCGCAACGAATTGTCGTCGAACGAAATTCCGCAACTCAGTATCAGCGACTCGGACGCTCATCTCGCAGAATCGGTCCTCGGAAATGCTTATATATTCGGCGAAGATGGAGGGGATATCATGTTCTACGTTCTCGATAATACTCCCGTTATTACTGATTACTGA
Protein Sequence: MMNKPATGDTEQNKESASETYLSACSICNQQHDTNSCSFFLAFRHVKDEPLVSKARQTLPKKLEITKMADDSFTVVAKQDFPQGTTFGPFEAKRDWAMNPMSDFPIKVFGNGKVDTYHLDYSDEETSNWMCFVSPASNAREQNLICYQLEGEIFYTAMRLIPAGEELRVWYAPSYAQKMKMPLYNTEFATISAAFRVSETEESSTPDENAKIDGTEFSSQTIREITECMPAEQLGTQKDETNWNCKICSIVIASVNAYAKHLMEHYKPFLGVFCDICNKKFYRLSVLEKHKRLKHPEGLPTSDVVGIPTSENQQQQNAQTILMNMSDSENETSEAMKDILEKFKAGKAITESTLLLSPMETEKETQNELPLLDTNSINVNDLLQNNGTLSMENSSLKLILENQCLNMNLGLGTMTDSILSENITGVDSVKFNVEELASELLDITPDVENINRRVDNLECDICEKKFDKADYLHRHLRKHTGEFTCSVCSNVFARKENLVSHICPSQQLERHNYECLYCQKRFVMKKYLKRHMVKHTGWNTCKWCRSLFDTRPELEAHECQAPKHVCSQCGKRFVHRAHLNRHAKSHANPKPAATKRRKKSTLPDKPAICEKCGDVFKNPHNLNQHLRSHGEKQFECDVCHSRFHRIGVLKQHKAIHQTVQIPCQVCGKKLKSKKALSVHVLLHGNKKFDCEKCDKSFFQRCNYLKHYKQVHSDKVTHKCPHCPTQFTNEQSFHKHVESHVKPAQHSCSSCHKVFHREYQLKRHFQTNHSGIIFRCPYCKMTARYRHSMRRHFERQHKSLSDDWDKPGFVNDLIEKTSSVLIGEQVIAKDRDNAVMQVAYGDVNGAKFEAQKNDGELILSVSGLANQFTDQAKVPAQSGDDLAQNSLNGQEILLQVSEICQSEPAIARNELSSNEIPQLSISDSDAHLAESVLGNAYIFGEDGGDIMFYVLDNTPVITDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00841332;
90% Identity: iTF_00397556;
80% Identity: -