Cvid011861.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptus viduatorius
Gene Symbol
Hr39
Assembly
GCA_964006125.1
Location
OZ023224.1:15307941-15312812[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.1 1.1e+03 -1.0 7.4 48 163 206 323 193 345 0.64
2 4 2 2.3e+04 -7.8 9.5 82 138 374 427 331 468 0.42
3 4 3.5e-08 0.0004 20.3 0.0 1 21 536 556 536 563 0.92
4 4 1.4e-73 1.5e-69 235.7 0.0 87 408 592 911 568 911 0.82

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCTCCGGCGCAATCGTGGAAGTCATCAAccacctcgtcgtcgttggcgATTCCTACGTCCCGCACACTTGAGACAGGAAAAAACGTTTCCGTCACGACGATCAACGTACCACCGGCCCAGGAAATGCACGACGgtaaaagcgTCTGCAAATTCGTCGGAGGACAGAACGGCGTGACGGTGTCGGTGGTCTCGAGTTGCGGCAGTGGTACCGGTAGCGGAATGGGTACGGGACCGGGCGGAGGCGGTGGAGGTGGCGCGTCTTCCTCGTGTCCGGATTCGAGTTCTCTCGACGATCTCGAGGACAGCGACGGCGAAGTAAGCAAAATTGACTTTCGCGGCGTTAATctgcgaacgaaaaagaagcgCGACACGAACGGTGGAACGGAGAACGATTGCGGCGCCGTAGGCGCCGACAATCTCGAACAACAGCAGCCCGAGAGACCGATGTCATGGGAGGGCGAGCTGTCCGATCAAGAAATGTCGTCCAACACGATCACCAATCAGGATCACGAGGAGACGTCGATGGAAGGCGTGCAGGTATGCGGCGCTAGTCCCGGACCCCAGGAGCAAAAGTTTCCGATAAAACCAGAGCCGGATTTTCGTTCGAGTCCCGGCCTCGGCATCAGTTCTCACAAcgacggtaatttgacgctaTCGCACGCGCAACagttgcagcagcagcagacgCACCAGCAGCAGCGTGGAATTGACAGTCTCGAGCAAACGCAGCAGAGTGATTTGCCTCTGTTAGTCGGCAAGTTGCTCGGTGGTTACAACAGTTCAACGCCGAATCACAGTCCGATACTGAATCCCCGTCATCACCTGACGAAGCACAGTCACACGAGGTCTCAGGTACCATCGCCGGATTCGGCGATACACTCGGCGTACAGCGTTTTCAGTTCGCCGACGCAGAGCCCCCACGCGGCTCGACATTCGGCTCTCGGTGCTGGAAGTCCTGTACCCTCGTCGTCTCTTTCGTTGTCGCGTCACAGTTTCAATAATTCCACGTCCTCCCTATCATTGTCATTATCGCACTCATTGTCGCGAAACAATTCCGACGCTTCGAGCAGCTGTTACAGTTACGGCTCGTTGAGTCCACCGACTCATTCGCCGGTACAACAGCCGAGGCATTCGCACGGTCAGCATCACCAtcatcagcaacagcaacagcaacagcaacaactgCCGCAGGGCAGTCCGTTGCATCTGCCCTCAGCATCCTCTGGAAACCCTCATCACTACTCCGCTCCGGGTTCGGAAGTATCGTCCGAGGGCCATCCGGAGGATCAGGAAGATTGCAAAATACCTTCAGCCCCGTCGGGCATATCGACAAGACAACAGTTGATAAACAGTCCGTGTCCCATATGCGGCGACAAGATAAGCGGCTTTCACTACGGTATATTCTCGTGCGAATCTTGCAAAGGTTTTTTTAAACGTACCGTGCAAAATCGCAAGAATTACGTTTGTTTGAGGGGCGCCGGTTGTCCGGTTACCGttgcaacgagaaaaaaatgtccggcTTGTCGTTTCGACAAATGTCTCAATATGGGAATGAAACTCGAAGCGATAAGGGAGGATAGAACCCGCGGTGGTAGGAGTACCTATCAGTGCACTTACACCTTACCGGCGAATCTGATCGGCAGTTCCGCCGGTGGTATGTCCGGCGATAAAATGACCGGTGGGGCATGCAGTCCTGCGCCCCCGGGTGCGGAACATCATCATTCCACGCGACATCACTGGAATCATTCGCACAAAATGCAAGCGGTGCCGCAATTACTGCAGGATATTATGGACGTCGAACACCTTTGGCATTACAACGACAACGATCGAACGACCGTCAGTAGTCAAAGCTCCGTTCACGGAGGCAACGGCAGCACAATGAACAACGATATTGCCGGTGGTATTGGGACTTTAGGTAACAACGCCGGCAGCGGTAGCGGACTGAGTCGCAATGGCAATGTCGACAATCGAGAACCATCGAGATCAACGACTACTGGAAGCTCTCCGAACAACGAACATCTACAGACGAACTCGTCGACCAATAACCCAACGAGCGGCAGTGCGAATTCGTCCAATCCCAATGGTAATTCGACTCAACATCCGGATTTCTTGTCGAATTTATGCAATATTGCGGATCATCGACTTTACAAGATTGTAAAGTGGTGCAAAAGTCTACCGCTCTTTaagaatatatcgatcgatgatcAGATATGCCTTTTGATCAATTCGTGGTGCGAATTGCTACTTTTCTCGTGCTGCTTTCGCAGCATGAGTACTCCTGGGGAAATAAGAGTATCGCTTGGGAAATCTATTACTCTCGAACAAGCGAGACAATTGGGATTGGCTACGTGCATCGAAAGGATGTTGGCTTTCACTAATAATCTCAGGAGACTGAGGGTTGATCAGTACGAATACGTGGCGATGAAAGTGATAGTCTTGTTAACTTCGGACACAAGTGAGCTGAAGGAACCCGAGAAAGTTCGTGCGTCGCAGGAAAAAGCTCTGCAGGCGTTGCAGCAATACACAATCGCCAAGTATCCCGAAATGCCGGCAAAATTCGGTGAGCTTTTGTTGCGAATACCGGATCTTCAGAGGACATGCCAAGCGGGAAAAGAATTGCTGAGTGCTAAGCGCGCCGAGGGCGAGGGCAGCTCTTTCAATCTATTGATGGAATTGCTGCGAGGAGATCACTGA
Protein Sequence
MSEQNGPTEGPGWWPPAQSWKSSTTSSSLAIPTSRTLETGKNVSVTTINVPPAQEMHDGKSVCKFVGGQNGVTVSVVSSCGSGTGSGMGTGPGGGGGGGASSSCPDSSSLDDLEDSDGEVSKIDFRGVNLRTKKKRDTNGGTENDCGAVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLGISSHNDGNLTLSHAQQLQQQQTHQQQRGIDSLEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHGQHHHHQQQQQQQQQLPQGSPLHLPSASSGNPHHYSAPGSEVSSEGHPEDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSAGGMSGDKMTGGACSPAPPGAEHHHSTRHHWNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRTTVSSQSSVHGGNGSTMNNDIAGGIGTLGNNAGSGSGLSRNGNVDNREPSRSTTTGSSPNNEHLQTNSSTNNPTSGSANSSNPNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAKYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059522;
90% Identity
iTF_00057987;
80% Identity
iTF_00398113;