Basic Information

Insect: Cryptus viduatorius
Gene Symbol: -
Assembly: GCA_964006125.1
Location: OZ023225.1:17573201-17576333[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-13 8e-11 41.8 0.0 4 38 18 52 16 56 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-13	8e-11	41.8	0.0	4	38	18	52	16	56	0.96

Sequence Information

Coding Sequence: ATGGTTCGAAACAGGAACCGAACTTCCACCCGCCAGTCATGGGACGATTTCGCGATGGCAAAAGCGATTAAAACTGTAGTTAACGGACAAATGGGCTACAGGAGAGCATCGGTGGCTTACGATGTCCCTCAGACAACGTTGGAAAGACGAGTGCGGTTGTATCGCGAAAATCCAGACATGGAATTGGCCATCATGAAAGgATTGGGACGATTCGAAACAGTTTTTAGCACAACACAAGAAAAGGAATTGGTCGACTATCTTCAAGATATGGAATCTCGTCTCCACGGCTTGACTGTTaccgaattaaaaatattggcGTGGCAACTGGCCGAGCAAAATGGTATTCGTCACCCTTTCACCGACGGAATGGCTGGAGAAGGTTGGATGAGAGGATTCTTAAAGAGGAATTCCATTCTCTCTCTACGCCAGCCGGAAGCAACGTCTGCAGCTCGAGCCAGAGGGTTCAACAAGGTCGTTGTGAATAATTTCCAAACCCTGCTACAACagacgattgaaaaatataatttaacgCCAAATCGCATTTATAACGTTGACGAGACGGGGTGTTCGACCGTTCCGAAACacgtttcaaaaattattgcgACCAAAGGGAAACGACAAGTCGGTGTCGTTACGTCAGGAGAGAGGGGTCAACTCGTTACCGTCGAGATGTGCGTATCGGCTTCCGGACGTTATTTACCGCCGATGTTCATCTTCCCCCGAGTTCGAATGGTCGAGAGTATGATGACGGGCGCACCCGAAGGAAGTTGGGGCGTATGTCATCCGAGTGGCTGGATGCAAACCGAAATCTTCTTTGAATGGTTCAAATGGTTTGTGGAGATTGTTCAGCCCTCGAAAGAGGAACCCGTTCTTCTCCTGTTGGATGGACACACCACCCACACTAGAAATCTCGAAGTTATCGACTACGCTCAGGAGCATTACGTCGTCATACTATGTTTCCCGCCACACTGCACGCATAAGCTGCAGCCATTGGACGTCAGTGTCATGCGGCCattgtcgatttattattccgCTGAGGTGAAACAATGGATGCGGGTAAATGCCGGTCGTGTTGTTAATCCCGCGCAAATTCCGGAACTGTTCGGTAGAGCTTATAGGAAGGCAGCCTCTGCACAAACGGCTATCAACGGTTTCCGAAAAGTCGGCATATGGCCCTTCAATCGCGACGTCTTCTCCGATGAAGATTTCATGGCGGCCGAAGTCACGAACCGACGGCGTCCATGCCTAACTGAGCAGATGATACACACTAATGAATGGACTCCTGTTGTGGAACCGGACTGGAATCGACAAGATTCATCGATCGACGCAACAGCAGCGGTTGCGGAACCGGACTGGAATCTACAGGATTCATCGATCGAGGCGACATTAGCCAACGATATCCGCTCTTTCGAAGGAATTTCCCATTGTGGGATGACGCAACAATCGGAACCATCATccgattgccgatttttttctgctgaGGAATTTTGCCATTCGCATTTGTCCGAATCCGCAGAACAGTCTTCGGATGCTCAATTTTTCTCGGCTGAGGAATTTTGCAACTCGCATTTCAACGAATCCGTAGAACAGTCGTCGGACGGTCAATTTTTCTCGGCTGAGGAAGATTTGCGCTCTCAGTCACGAATGTCGACGCGGGCTCATGGAACGAATCCATCGCAAGCACATTTGGATGTCTGTACGCCTTTGACTATCGATTTGAGCGATAATGTGCATAGTGACCGAGGTCGGAGAGATGCATCAGTGGAAACGGTGTTCAACGACAGTATCCTAAACTTCGATGATATTCATCCGACAGAGGCATATCTATCGTCGAGGAAGTCGTTGGATCGCGTGAATCTTTTTCCTCGGAAGATTTGTCATTCTCCCTCGAATCTATCGATGGAGTCTAGCCAATTGTCAATCTCTATGCCCGACGAGGGAAGACTTAGATCGCTAATGATACCGCCAACGGAGGCCACTGTAGTTGACGATTTGTGCGCGAATTCTTCGCCGAAGAATCTGAATGTAGCTGCAGGTGCTGACGTTTTCGACGATCTGAGTCAATCTCTGAGTCAAGTGTCCATATGGAATGAAGAGGAAATCATCAGCGACCCGCAGCCACATTGTTCAAAAACTTCGCCACGGAAGAGGCCTGCGTCATCAAGCTTTCCATCGAAACAGCCGCGAAAATCAGGAGTACCGTTCCGTGctgtgagaattttttcgagttcaGAAGACGAAGACGCGATTGTCGAGGTTTTGGAAAAACCAACAACATACTGTAGACGCAAATCCAAATTCCTTGCTACAAATGAGTTTACGGTATCCCCATACGATATACAACCGCTACCGGTAACCGATGAGGTTCAGCCTCGCAAACGTCGTGCTCGCGGAAAAACAGCTATATTGACCGACTCTCAGTACCGAGAGCAATTGTTTCAACAGAAACAAGTTGATCAGCACCCGACGAAGACTGGGAAACTGCAGAGAAAAGGTCCAAAGCGTACAGGCAAGGTGAAAGAAAAAGGCAAAAATTCGAGACGGCCTACGGTCGTATCGAGAGAAGATGCGTCATCGGAAGATGTGGCGTGCCTTTTTTGTGAAGGATTGTATTCGGAATCTACCGAAGGATGGATACAATGCCAAACGTGCAAAAATTGGTCACACGAATCATGTGCCGGTATTGATACAGACGAATTGGTGAAATACGATTGCGATTTTTGTAAGAAGTGA
Protein Sequence: MVRNRNRTSTRQSWDDFAMAKAIKTVVNGQMGYRRASVAYDVPQTTLERRVRLYRENPDMELAIMKGLGRFETVFSTTQEKELVDYLQDMESRLHGLTVTELKILAWQLAEQNGIRHPFTDGMAGEGWMRGFLKRNSILSLRQPEATSAARARGFNKVVVNNFQTLLQQTIEKYNLTPNRIYNVDETGCSTVPKHVSKIIATKGKRQVGVVTSGERGQLVTVEMCVSASGRYLPPMFIFPRVRMVESMMTGAPEGSWGVCHPSGWMQTEIFFEWFKWFVEIVQPSKEEPVLLLLDGHTTHTRNLEVIDYAQEHYVVILCFPPHCTHKLQPLDVSVMRPLSIYYSAEVKQWMRVNAGRVVNPAQIPELFGRAYRKAASAQTAINGFRKVGIWPFNRDVFSDEDFMAAEVTNRRRPCLTEQMIHTNEWTPVVEPDWNRQDSSIDATAAVAEPDWNLQDSSIEATLANDIRSFEGISHCGMTQQSEPSSDCRFFSAEEFCHSHLSESAEQSSDAQFFSAEEFCNSHFNESVEQSSDGQFFSAEEDLRSQSRMSTRAHGTNPSQAHLDVCTPLTIDLSDNVHSDRGRRDASVETVFNDSILNFDDIHPTEAYLSSRKSLDRVNLFPRKICHSPSNLSMESSQLSISMPDEGRLRSLMIPPTEATVVDDLCANSSPKNLNVAAGADVFDDLSQSLSQVSIWNEEEIISDPQPHCSKTSPRKRPASSSFPSKQPRKSGVPFRAVRIFSSSEDEDAIVEVLEKPTTYCRRKSKFLATNEFTVSPYDIQPLPVTDEVQPRKRRARGKTAILTDSQYREQLFQQKQVDQHPTKTGKLQRKGPKRTGKVKEKGKNSRRPTVVSREDASSEDVACLFCEGLYSESTEGWIQCQTCKNWSHESCAGIDTDELVKYDCDFCKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00397987;
90% Identity: iTF_00397196;
80% Identity: -