Carm020023.1
Basic Information
- Insect
- Cryptus armator
- Gene Symbol
- -
- Assembly
- GCA_963971235.1
- Location
- OZ020232.1:28176516-28179718[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-13 7.8e-10 39.4 0.0 4 38 18 52 15 56 0.95
Sequence Information
- Coding Sequence
- ATGGTTCGAAACAGGAACCGAACTTCCACCCGCCAGTCATGGGACGATCTCGCGATGGCAAAAGCGATTCAAACTGTAGTGGACGGACAAATGGGCTACAGGAGAGCGTCGGTGGCTTACGATGTCCCTCAGACAACGTTGGAAAGACGAGTGCGGTTGTATCGCGAAAATCCAGACATGGAATTGGCTATCATGAAAGgaTTGGGACGATTCGAAACTGTTTTTAGCACACCACAAGAAAAGGAATTGGTCGACTATCTTCAAGATATGGAATCTCGTCTCTACGGCTTGACTGCTACCGAATTAAAAATATTGGCGTGGCAACTGGCCGAGCAAAATGGTATTCGTCACCCTTTCACCGACGGAATGGCTGGGGAAGGTTGGATGAGAGGATTCTTAAAGAGGAATTCCATTCTCTCTCTACGCCAGCCGGAAGCAACGTCTGCAACTCGAGCGAGAGGGTTCAACAAGGTCGTTGTGAATAACTTCCAAACCCTGCTACAACAGACGATTGCAAAATATAACTTGACGCCAAATCGCATTTATAACGTTGACGAGACGGGGTGTTCGACcgttccgcaacacgtttcaaAAATTATTGCGACCAAAGGGAAACGACAAGTCGGTGTCGTTACGTCAGGAGAGAGGGGTCAACTCGTTACCGTCGAGATGTGCGTATCGGCTTCTGGACGTTATTTACCGCCGATGTTCATCTTCCCCCGAGTTCGAATGGTCGAGAGTATGATGACTGGCGCACCCGAAGGAAGTTGGGGCGTATGTCATCCGAGTGGCTGGATGCAAACCGAAATCTTCTTTGAATGGTTCAAATGGTTTGTGGAGATTGTTCAGCCCTCGAAAGAGGAACCCGTTCTTCTCCTGTTGGATGGACACACCACCCACACGAGAAATCTCGAAGTTATCGACTACGCTCAGGAGCATTACGTCGTCATACTATGTTTCCCGCCACACTGCACGCATAAGCTGCAGCCATTGGACGTCAGTGTCATGCGGCCATTGTCGATTTATTATTCCGCTGAGGTTAAACAATGGATGCGGATAAATGCCGGTCGTGTTGTTAATCCCGGGCAAATTCCGGAACTGTTCGGTAGAGCTTATAAGAAGGCAGCCTCTGCACAAACGGCTATCAACGGTTTCCGAAAAGTCGGCATATGGCCCTTCAATCGTGACGTCTTCTCCGATGAAGATTTCATGGCGGCCGAAGTCGCGAACCGACGGCGCCCATGCCTAACTGAGCAGATGATACACACTAACGAATGGACTCCTGTTGTGGAACCGGACTGGAATCGACAAGATTCATCGATCGATGCAACATTAGCGGTTGCAGAACCGGAATGGAATCGACAAGATTCATCGATCGACGCAACAGCAGCGGTTGCGGAACCGGACTGGAATCTACAGGATTCATCGATCGAGGCGACATTAGCCAACGATATCCGCTCTTTCGAAGGAATTTCCCGTTGTGGGATGACGCAACAATCGGAACCATCATccgattgccgatttttttctgCTGAGGAATTTTGCAATTCGCATTTGTCCGAATCCGCAGAACAGTCTTCGGATGCTCAATTTTTCTCGGCTGAGGAATTTTGCAATTCGCATTTGAACGAATCCGTAGAACAGTCGTCGGATGGTCAATTTTTCTCGGCTGAGGAAGATTTGCGCTCTCAGTCACGAATGTCGACGCGGGCTAATGGAACGAATCCATCGCAAGCACATTTGGATGTCGATACGCCTTTGACTATCGATTTGAGCGATAATGTGCATAGTGACCGAGGTTGGAGAGATGCATCAGTGGAGACGGTGTTCAACGACAGTATCCGAAACTTCGATGATATTCATCCAACAGAGGCATATCTATCGTCGAGGAAGTCGTTGGATCGCGTGAATCTTTCTCCTCGGAAGATTTGTCATTCTCCCTCGAATCTATCGATGAAGTCTAGCCAATTGTCAATCCCTATGCCCGACGAGGAAAGACTTAGATCGCTAATGATACCGCCAACGGAGGCCACTGTAGTCGACGATTTGTGCGCGAATTCTTCGCCGAAGAATCTGAATGTAGCTGCAGGTGCTGACGTTTTCGACGAGCTGAGTCAATCTCTGAGTCAAGTGTCCATACGGAATGAAGAGGAAATCATCAGCGACCCGCAGCCACATTGTTCGAAAACTTCGCCACGGAAGAGGCCTGCGTCATCAAGCTTTCCATCGAAACAGCCGCGAAAATCAGGAGTACCGTTCCGTcctatgagaattttttcgagttCAGAAGACGAAGACGCGGTTGTCGAGGTTTTGGAAAAACCAACAACATACTGTACGATATCTTCGcgtaaagcttttttttctttgatctcCCTGTGTATCACATGGTATCTATCATTCTCGGGTAGACGCAAATCCAAATTCCTTGCTACAAATGAGTTTACGGTATCCCCATACGATATTCAACCGCTACCGGTAACCGATGAGGTTCAGCCTCGCAAACGTCGTGCTCACGGAAAAACAGCTATATTGACCGACTCTCAGTACCGAGAGCAATTGTTTCAACAGAAACAAGTTGTTCAGCACCCGACGAAGACTGGTAAACTGCAGAGAAAAGGTCCAAAGCGTACAGGCAAGGTGAAAGAAAAAGGCAAAAATTCGAGACAGCCTACGGTCGTATCGAGAGAAGATGCGTCATCGGAAGACGTGGCGTGCCTTTTTTGTGAAGGATTGTATTCGGAATCTACCGAAGGATGgatacaatgccaaacgtgcAAAAATTGGTCACACGAATCATGTGCCGGTATCGATACAGACGAATTGGTGAAATACGATTGCGATTTTTGTAAGAAGTGA
- Protein Sequence
- MVRNRNRTSTRQSWDDLAMAKAIQTVVDGQMGYRRASVAYDVPQTTLERRVRLYRENPDMELAIMKGLGRFETVFSTPQEKELVDYLQDMESRLYGLTATELKILAWQLAEQNGIRHPFTDGMAGEGWMRGFLKRNSILSLRQPEATSATRARGFNKVVVNNFQTLLQQTIAKYNLTPNRIYNVDETGCSTVPQHVSKIIATKGKRQVGVVTSGERGQLVTVEMCVSASGRYLPPMFIFPRVRMVESMMTGAPEGSWGVCHPSGWMQTEIFFEWFKWFVEIVQPSKEEPVLLLLDGHTTHTRNLEVIDYAQEHYVVILCFPPHCTHKLQPLDVSVMRPLSIYYSAEVKQWMRINAGRVVNPGQIPELFGRAYKKAASAQTAINGFRKVGIWPFNRDVFSDEDFMAAEVANRRRPCLTEQMIHTNEWTPVVEPDWNRQDSSIDATLAVAEPEWNRQDSSIDATAAVAEPDWNLQDSSIEATLANDIRSFEGISRCGMTQQSEPSSDCRFFSAEEFCNSHLSESAEQSSDAQFFSAEEFCNSHLNESVEQSSDGQFFSAEEDLRSQSRMSTRANGTNPSQAHLDVDTPLTIDLSDNVHSDRGWRDASVETVFNDSIRNFDDIHPTEAYLSSRKSLDRVNLSPRKICHSPSNLSMKSSQLSIPMPDEERLRSLMIPPTEATVVDDLCANSSPKNLNVAAGADVFDELSQSLSQVSIRNEEEIISDPQPHCSKTSPRKRPASSSFPSKQPRKSGVPFRPMRIFSSSEDEDAVVEVLEKPTTYCTISSRKAFFSLISLCITWYLSFSGRRKSKFLATNEFTVSPYDIQPLPVTDEVQPRKRRAHGKTAILTDSQYREQLFQQKQVVQHPTKTGKLQRKGPKRTGKVKEKGKNSRQPTVVSREDASSEDVACLFCEGLYSESTEGWIQCQTCKNWSHESCAGIDTDELVKYDCDFCKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397987;
- 90% Identity
- iTF_00397986; iTF_00397985; iTF_00397987;
- 80% Identity
- -