Basic Information

Gene Symbol
JARID2
Assembly
GCA_963971235.1
Location
OZ020239.1:6846345-6853186[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-23 3.5e-19 70.0 0.0 6 89 1333 1414 1329 1414 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGTCGAAATGACAAACGAAAACGGAAAGAGGGCGATCTCGTGGATCTCATGGATCCCCTTTCAGAGTCACCCAAAAGaaCAAAGGTTCACGCGCAAAGAAAATTTGCTCAAGGAGCAGCGACCGTTTTCAGTCCTGCGCCGACATTGGTTAAGGAAAAGGAGAAAACTAAACCGGCAGTTATTACGGAGCTAATAACGCACAAGCGACCGAATACCGAAGATTTTCTGACGTTTCTCTGTTTCAGAGgAACATCGATTTTGCCGCCgagtttaaattttttcaatgtcggaagcaaaaaagaaaaatccgagACAAAAGTATCCGCGGCGTCCAAAATCAATGGAAAATCTTCGTCGTCAAATTCCGTTCCCACGACGGCGATTACAAAGCAGGAAACGACTTCTAACGCTCAGAACAAAACCAGCGCCAAGAGTGCCGTCACTGTGAAAAAGAAAGTATCGCCGCCCGTCTCTCAAAAGCCTCTGACCAAATATAAAACGGCGACGTCGACGGTTCAGgcgttaaaaaagaaatatcaagAACAACGTCTCGCGAAGCAAAgaataagaaataaatttaaagcTTCGTGCGTAATGAGAACGCGATCGGCGACCGAACGGGTCGTTTTGAAATCGGTAACGAAATTGGCGCCTCGGAAGTTTATCgcgcgaaacgaaacgaaaaaacgacACGGTTTGCGTAGCGGTGGATTGGCGGATAAGACGAAGAAAACGAGCGTAACGCCGACGAAGGGACGACAAATTTCGTCGAAACCAAAGAAGAGACTCGTCGTTAAGGAACAAACGAGCGAATCCTCCGAATCGGAGAGCGCCACGTCGGAGGACGAAGCCGCACCGTCGAAGAACGCAGCGCCGTTGAAACGCTCAACGAAAGCGATACAGAAGAAAATTTGCACGCGTAGCAAGTCGGAGATGAGACGAATAACGCGATCGCAAAGGGACAGCGCGCCAACGGGACCGGGAATGTCGAGAAGACCATCGAGAAAAACTAAAGAAGCAGCTGCCGTTTACATGGAAATATTGGGAAGAAAATTAGTGAGTCCCGATCTcgaaaacgacgacaatctCTCAGTCGATAGTTTTCCCGAACTGCCGAACGCGCGACGCACCGCCCAAGCGGAGAACGAGataagagcgaaatcgaaacaaGCAATTAAGAATCGagatacgaaagaaaaagagtCGAAAACCACCGAAAACACCGTTTCAAACTCATGCAAAAATAAGCCAAAAGTTGAAAAACCAATTTTGAAGAGTAGCAAAAGAACGCTGAGAGTGCGAAGATACTGCGAATTGGATAGCGAAGACGAGTCCGAGACATCGGTGGAACCGGATAAAACGCGACACGTGACGAGGCGCAGCGCGATAAAAACCGAAAAACCAGCAACGCGAAGCCTTCGTTCGTCTTCGCGTAATCAGCCATCGAAGAGCGAAGTTTCGTCGCCGACGAAGGTCCCGAAGGAGAAAATCACGACGGTGAAGCGCGTGCGACCGCCGCAAAAGAAAGCCGAAAGCGAAGATTCCGAAGAAGAAGAGTCGTTGGGAACTCTGTTAAGTaaactgaaaaagaaaaaagaagaaaaaacggagATTCGCAAAGCGGCTAATCAAGACGAATCCCCGACGATCGAAGCTCCGATCGAGCCGATCGAACGTCCTGCGCGATCGAATAATCCCACACCGTCGCAGGTTTCCGACGACGAGGAATCTTTTCGCGGTTTTACGAAGAAAGCGATATCTAAAGTATTGAGTTCCTGCAATACTCACGTTAACGCTAATCTTCTCGCGTCGGAAGAGGTTTACGGAAAATTAGATGTGCTGAAAACACAAGATACGCCGAAAATCGAAGCCTCCGTACAGCGTGATACGAAAAACGTAATAACGGATATCAAAGTCGAGCCGTTGACGACGGTGGCACCGATATTTACGATAGTAAAACCCGTTCAGGAGCAATCGACGGCAATCGCAACTTGTACTCCCGATATCGAAATTCCGAATCGCGACGAGACGATCAAATTGGAAACGAAATGCAATCACGTAGCTGAAAGTTCACCTATGAATATAATCGACATGCCGTTAACTGGAATTCACGGGCGAAAAGCTCGCGTAAACATGTCGACGGAACAGATAGAAAAATGGCTAAACGAAAGTTCGATGGCGAGAGCCAAACAGAGAAAACAATCGGAGACGgatgcatcgacaaattttCCATTCGAAGTACcggaaaaagttattaaatccGATATGAATCATTTGTCGATACCAACGAGAATTCAACATCTCGTACGTCCGGTTAACGTGACGATAGCGAAATTAGCGGAAAAAGCTAATGCACGCGATCGCATGGGTTTTCAGAGCAGAATAGCGTCGACTTTTATAACCGGAGCGCGAATACCACTCGCAAAACCTCTAAACATACCGATTCCCAATAGAAACAAAATAAACGCGGATATCAAAGAAATAATAAAGGGAAGAACGGCAAAAGTTACCAAAGAGGTATCGACCGGTGAGGAAAGCGACTCGGTATCGAAATCCGATCAAAATTCCATCGACGGTTCGCCCGACAAAAAATCGACACCGGAGAAAAAGGGAATATTTCAACAGCGAAAAACTTTCTTATCGAAAGTAAAGGAACGAAAAACTGCGACACCGAACGCTAATGCGTTTTCACCGGAGAACGAGAGCAGCGTATACGCCTTCGAGAGCGATACGGAAGTACCGATAAATACGCCGTTTCGAAGAAAACTTAAAGAATTCGGACAGAAAGGTTGCGGCGGTACTTCGGATCCCGATACCTCGAGAACAGGAAACGAAGATTCATCGAAGTTTAGCGATGTCGGTACGAGCAGCGAAACCGATGGAAAAACTTCGTCACCAAATAAATTCGCGATGCCTAAGAGTTTCGGCAATTTATCGAACGTTCAGATTCTGCCGCTCGGAAAAATGCCCGCCGAGTGGGGCGGCGTTAACTGCAGCGCTTCCATAGCAGTGCAGGTAAATTTTGACGAACAATCGCAGGAActtcagcaacagcaacaagaGGAAAATTCATTGACGCAGGAGAGCGAAGATTTGCAACAGAAATGTACAGAGATATCGACGCAAACGGAGAATACTAATGATAACGAAGACGACAACGACGGGGGTCACGTTTTCTACATTCCACTGCAAACGGTCACGAGAAACGGACCAAATTTGGTTCAGGGACAGCAATTGATTCAGGGAGTTGCAGTTAAACTCGGTACCGAAGGTCCCAATGGTCCGAATCAAAGAGTTCTCCTGAGAGCTCAACTCGTTACTAAACCACCGCTCGCCGTCGCGCGGTGCCCTCCCGTTGGTACCGTTCAACCGACGACCAGAACTCCGCCGAGTTCTTCGAGTAGTACTTCGGTACTCGATCATCCTTACGCGACCGTTAATCCTCCCGTAGCGTCGACCTCAGCGTTGCCAACGCCGGTCGTTCCTCCCGTAGCAACGATTCCAGATTTTCAGGCACCGCAACCGCAGCCTCCCAGTCGCGTTTCTTCGAATCACAGCACCAGACAGAGCTCTTCCGGTTCGAATAATCCGACGGAAAAAGCAACGAAATCTCCGAaggcaacgagagagagaaaagcttCGGTAGACTCGACGAAAACTGGGAAAAGaacttcCGCTAAATCGCGTGCAAAAGCCGCGGAAATTTTGTCACCGAGCAACACGACTGCTTTTCCCGGTTCGACGAACAGCAACGCGGAGGCGCGGCTCGTCGAGGCGCCGACTTTCCATCCGACGGAAAAAGATTTTCAGGATCCTTtggaatatatcgataaaatcagACCGATTGCCGAGAAATTCGGTATATGCCGCGTCGTGCCACCGGCGAATTTTAAACCCGAATGCAAAGTATCGGACGATATGCGGTTCACTGCTTACAATCAATACGTTCATCGAATGCTTCATCGTTGGGGTCCCAATGTTAAGGAAATGATGGCTATCAAGAAATATCTTGCGACGCAGAGTATCACTTTGACTCATCCTCCATGGatcggTGGGATGGAAGTCGATTTGCCACATTTGTATCAAACGGTCCAAAGTCTCGGAGGATTGAAGGAAGTTATAGAGAAAAAGAAATGGCAAAAAGTTGCCGATGGCATGAAAATTCCAAAATCGGCACAGGATCGCGTTACGAAACTTGACGATATTTATTGCAAATATTTGTTGCCATACGATACTCTTTCGCCCGAGGAACGAGGAAAGTTATTCGACGACGTCGAAGCGGAATGGAAGATAAGGGAAACAAAGACTCTGCAAAGGCTCGACGCTCAATCGAACGACGCCGAcgaggaagacgacgacgacagtTCGGATGAAATCGAAGAATGCATCGTGAAAGGTCGCAACATGCCGTTGAACGCCTTCTATCGTATCGCGCGAAACACTCAACGCATGTGGTTCGGTGAGAATCAACGCTCGGGAAGCGAAGCCGACGGTGCATCGGCCGGCGAAGTCGAAACTGCATTCTGGAAGCACGTCGCCGAACGCAAGCGTCACGTATGCGTTCACGCAGCGAGTATCGACTCCAGTGGACGAGGTTTCGGCTTTTCCGTCGCGAAGAACAGTCCTTTTGCCAGACATCCGTGGAATCTTAAAGTTTTGACGAATAACGCCGGATCGGTGCTTCGAGCACTCGGACCTCTTATGGGTGTAACTGTGCCGACGCTTCACGTCGGTATGCTATTCAGCGCCTGTTGCTGGTATCGGGATCCTCACGGACTTCCGTGGATCGAATACCTTCACACAGGAGCCAAAAAAATTTGGTACGGCATTCCCGATGAACACAATAATAACTTCCGAGAAGCTTTGTCCAAAATGGTTCCGCGTTATTGCAAGAAAAAAACTATATGGCTGCCATCCGACACCGCTATGGTACCGCCGGAAATGTTGGTCAATAATGGGGTTCCTCTCTGCCAAACGGTTCAAGAACCCGGGCAATTCATCGTTGTTTTTCCAAAAGCATTCACCTCGAGCATTTGCACCGGTTACGTTGTTTCCGAAAGCGTGTATTTTGCTCAACCCGCCTGGTTAGAAAATGCCGAACAAGTGTTCAAGGATCTGCACGATAGCTGCGAGCCATCGATATTCTCATTCGAGCGATTGCTCTTCAGTATCATCAACGACACGCGATCTCATATAGACGTACTGAAACAGattATGCCAGCGGTCTTGAAAATTCGCGAACGCGAGTTGGAGTATCGCAAGCAATTGGAATGCATAGGATtagcgaataaagaaaaattaccaCTGCCCGATACCGGTAAaggaaagaaaggaaagaaagTTAAGGAAGAAGACGGCGATTTCGAGTGCGAAACTTGCCGCGCAAATCTATTCGTATCTTTAGTTAACAATTCCAATGACGATAGCGTATACTGCCTGCCGCACGCTCTTCAATTGATCGTGAGAAAGCGACAAGTATTGAAAAATTGTACTTTGATGTACGCGTATACGGAGGACGAATTGGACGACTTGATACACAAACTGGAAGACAGGATCGAAGCCAAATCGAAGAAAGCTAATCAAATGAGGCAATCTAAGTAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPTLVKEKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKSETKVSAASKINGKSSSSNSVPTTAITKQETTSNAQNKTSAKSAVTVKKKVSPPVSQKPLTKYKTATSTVQALKKKYQEQRLAKQRIRNKFKASCVMRTRSATERVVLKSVTKLAPRKFIARNETKKRHGLRSGGLADKTKKTSVTPTKGRQISSKPKKRLVVKEQTSESSESESATSEDEAAPSKNAAPLKRSTKAIQKKICTRSKSEMRRITRSQRDSAPTGPGMSRRPSRKTKEAAAVYMEILGRKLVSPDLENDDNLSVDSFPELPNARRTAQAENEIRAKSKQAIKNRDTKEKESKTTENTVSNSCKNKPKVEKPILKSSKRTLRVRRYCELDSEDESETSVEPDKTRHVTRRSAIKTEKPATRSLRSSSRNQPSKSEVSSPTKVPKEKITTVKRVRPPQKKAESEDSEEEESLGTLLSKLKKKKEEKTEIRKAANQDESPTIEAPIEPIERPARSNNPTPSQVSDDEESFRGFTKKAISKVLSSCNTHVNANLLASEEVYGKLDVLKTQDTPKIEASVQRDTKNVITDIKVEPLTTVAPIFTIVKPVQEQSTAIATCTPDIEIPNRDETIKLETKCNHVAESSPMNIIDMPLTGIHGRKARVNMSTEQIEKWLNESSMARAKQRKQSETDASTNFPFEVPEKVIKSDMNHLSIPTRIQHLVRPVNVTIAKLAEKANARDRMGFQSRIASTFITGARIPLAKPLNIPIPNRNKINADIKEIIKGRTAKVTKEVSTGEESDSVSKSDQNSIDGSPDKKSTPEKKGIFQQRKTFLSKVKERKTATPNANAFSPENESSVYAFESDTEVPINTPFRRKLKEFGQKGCGGTSDPDTSRTGNEDSSKFSDVGTSSETDGKTSSPNKFAMPKSFGNLSNVQILPLGKMPAEWGGVNCSASIAVQVNFDEQSQELQQQQQEENSLTQESEDLQQKCTEISTQTENTNDNEDDNDGGHVFYIPLQTVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPLAVARCPPVGTVQPTTRTPPSSSSSTSVLDHPYATVNPPVASTSALPTPVVPPVATIPDFQAPQPQPPSRVSSNHSTRQSSSGSNNPTEKATKSPKATRERKASVDSTKTGKRTSAKSRAKAAEILSPSNTTAFPGSTNSNAEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDDVEAEWKIRETKTLQRLDAQSNDADEEDDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGSEADGASAGEVETAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPEMLVNNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLHDSCEPSIFSFERLLFSIINDTRSHIDVLKQIMPAVLKIRERELEYRKQLECIGLANKEKLPLPDTGKGKKGKKVKEEDGDFECETCRANLFVSLVNNSNDDSVYCLPHALQLIVRKRQVLKNCTLMYAYTEDELDDLIHKLEDRIEAKSKKANQMRQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01207132;
90% Identity
iTF_00397845; iTF_00840838;
80% Identity
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