Csec002870.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- grn
- Assembly
- GCA_002891405.2
- Location
- NW:220170-608571[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 4.5e-16 57.6 4.7 1 35 483 516 483 517 0.98 2 2 7.5e-19 1.6e-15 55.9 7.5 1 35 540 573 540 574 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACAGCAAGCGAGAACGGgcaccaccatcatcaccacAGGTGGTACGAAACTCCGTCGCGTCTGGGAGTAGTTGATCACCACCAATCATCATCGCCGTCTGCAGCTTCCAACGGCCAGTCTAGCAATATGGGCGCCGGCAGTCTCGACCCTAACAGTCTCTTGGGCGCCACCAGTAGCGGTGCTTCAACCGCGGGCGACCATCAGGCGGATATGACGGCGTCTGCAGTAGCGGAACACATGTCCTCGTTTTTCGCAGCCCATCATCCGGGTCTGGCGGCAGTGGCGGCGGAGGGCACCGGGACGCACCACCACCGTGCGGCTGCACGCTACTACCACCCGCAGATGCACCACTCGCCGTACGCAGCGTCGGCGGCGGCGTCACATGCAGCTGCCGCCGCGCGGATGTCCGCCGGAAGTCAAGTGTGCCGGCCTCACTTCCACCACACGCCATTGCACCCGTGGCTGACCGACACCACCAAGACCATGGTGGGCCACGGTTCCGCCTGGTGCAGTCCTTTTGGCACCGGTTCCAGTGGCAGCAGCGGTACCACCAGCAACTCCACAGACGAGAAGCCTCCTTCCCTCTCCCCCGCCAGCACTTCCCACCACTCCACAAGCGCGGCGGCACACCATCTCTTCAGCTTCCCACCCACACCCCCTAAGGACGCCACCCCCGACTCTGTGACGGCTGCCAGCACGGCTCTCACGAGCTCGGCTGCTGCGACTTCTTCGGCGACTTCTGCCTCCGTGGATTACCAGAACGCCGCAGCAGCTGTCGCGCATGCGGCAGCAATGGGCGTCGCCTTCATGCACCACCAGGACACCACGGGGTCGAGCCTGTGTGGCAGCAACAACAGCTCTCTCGACATCAAACCGGGCGTCAATATGCTGAACAGCTCTGTCTCCGCGGCGGGGACTTGCCCCGGGGGAGCCAATGCCTCTGGCGGCGTCAAGCAGAGAGAAGGTACATCGTCCACGGCTTCGAATAATAGTTCCGCTTTTTCTACATCATCTTCCGCCGCGTCTCCTGCGGAAGCGTCTCCAAGAGACTCGGCGTCCTCTCAGCACCTGAGTGTGCCCCAGCAGCTCCACAGTTCCTCCTCCGCCCTCCACCCACAGCCATCGCATGGCATGAGTAGTCAGTCGCATCATTACCCTCCGCCGCCACCCCTGCAGCCATCCCCCTATCACCACGACACCGGAAGTGGATCCACCCCGTCGTATATGAGTTATCCTTCCCATCACCTGAATCACCATCACCTGAACCACCACGGTATGTCCCACCATCATCACCCTGCCGCCATGTTTAGCACCAAGTCTCTGTCGGGGCACCACCAGATGGTGTCCGGATCTCCGGGTGTCGCTGGAGCAGGTTCCGGGGCCGCGAACTCGAAAACGTCCAGAACGAAATCCAGGTCGAGCGCCGAGGGAAGAGAATGCGTCAATTGCGGGGCGACGTCGACGCCGCTATGGCGTCGGGACGGCACGGGACACTACTTGTGCAACGCTTGTGGCCTGTACTACAAGATGAACGGGCAGAATAGGCCACTCATCAAGCCAAAGAGACGGTTGTCGTTGCAGTCGGCGGCGAGGCGGGCGGGCACCAGTTGCGCCAACTGCAAGACGACGACCACGACGCTATGGCGCCGGAACCAAAATGGAGAGCCGGTTTGCAACGCATGCGGTCTATACTACAAACTGCACAATGTGAACCGACCACTAACCATGAAGAAGGAGGGAATCCAGACCCGGAACCGGAAGCTCTCCTCCAAGTCCAAGAAGAAGAAGGGCGGAGTTCCGGGCTCATGCCTGTCTCTAGGAGGAGTCATGTCTGACATGATCAAGCCCCTGGATCCCACAGGAAAATCCGGGGGGTTTGGAACAGGAGCTGGGGGTTTCGGCTCGCCGATGGGTGGTGGCGCTAATGTACACCCCCACCTGCACCCGCATCACGCTGCCATGTCACACTACATGTATCACAACACTCACCACCAAGGGTTCATGAACCCTGGTCCCCCGGGGCCTGTCCCCCCTCCAGGACCGCCACCCCATCACGGTATGCACCACCATCACATGACGTCGTTATCAGCTCTCGGATCAGGCGGTCTGGGACTTGCGGCGACGTCGAACGGAATGACGAGCTGGAGGTCAGAGTACACGTGA
- Protein Sequence
- MDMTASENGHHHHHHRWYETPSRLGVVDHHQSSSPSAASNGQSSNMGAGSLDPNSLLGATSSGASTAGDHQADMTASAVAEHMSSFFAAHHPGLAAVAAEGTGTHHHRAAARYYHPQMHHSPYAASAAASHAAAAARMSAGSQVCRPHFHHTPLHPWLTDTTKTMVGHGSAWCSPFGTGSSGSSGTTSNSTDEKPPSLSPASTSHHSTSAAAHHLFSFPPTPPKDATPDSVTAASTALTSSAAATSSATSASVDYQNAAAAVAHAAAMGVAFMHHQDTTGSSLCGSNNSSLDIKPGVNMLNSSVSAAGTCPGGANASGGVKQREGTSSTASNNSSAFSTSSSAASPAEASPRDSASSQHLSVPQQLHSSSSALHPQPSHGMSSQSHHYPPPPPLQPSPYHHDTGSGSTPSYMSYPSHHLNHHHLNHHGMSHHHHPAAMFSTKSLSGHHQMVSGSPGVAGAGSGAANSKTSRTKSRSSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGVPGSCLSLGGVMSDMIKPLDPTGKSGGFGTGAGGFGSPMGGGANVHPHLHPHHAAMSHYMYHNTHHQGFMNPGPPGPVPPPGPPPHHGMHHHHMTSLSALGSGGLGLAATSNGMTSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370637;
- 90% Identity
- iTF_00370637;
- 80% Identity
- -