Cfor012238.1
Basic Information
- Insect
- Coptotermes formosanus
- Gene Symbol
- grn
- Assembly
- GCA_013340265.1
- Location
- BLKM01000446.1:810783-1170403[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-19 4.5e-16 57.6 4.7 1 35 482 515 482 516 0.98 2 2 8.7e-19 1.5e-15 55.9 7.5 1 35 536 569 536 570 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACGGCAAGTGAGAAcggtcatcatcatcatcatcacagatGGTATGAAGCACCATCACGTTTGGCAGTTGATCATCACCAATCTTCATCACCATCTGCAGCCTCTAACGGGCAATCCAGCAACATGGGCGCGGGAGGTCTAGACCCAAACAGTCTCCTGGGTGTCTCCAGCAGCGGAGCTTCTGCAGGAAGTGATCATCAAACAGATATGACGGCGTCTGCTGTAGCGGAGCACATGTCCTCGTTTTTCGCTGCCCACCACCCCAGTCTGGCTGCGGTGGCGGCAGAAGGCACCGGGACACACCACCACCGGGCGGCGGCTGCTCGCTATTATCACCAGCAGATGCATCCGTCACCGTATGCGGCCTCTGCAGCGTCTCACGCAGCTGCAGCGCGGATGTCCGCCGGAAGTCAAGTGTGCCGGTCCCATTTCCATCCCTCGGCATTGCCATGGCTGGCCGACACAACCAAGCCTATGGTGGGTCATGGGTCCGCCTGGTGTAGTCCGTTTGGCACCAGCTCCAGTGGTGGCAGTGGTGCAACCAGCAACTCCACGGACGAGAAGCCTCCTTCCCTATCTCCCGCCAGCACTTCCCACCACTCTGCCACCGCCGCCGCACACCACCTCTTTAGTTTCCCACCCACACCTCCTAAAGACGCCACCCCGGATTCAGTTACCGCCGCCAACACAGCCCTCACGAGTTCCGCTGCTGCTACTTCATCTGCAGCTTCCGCGTCCGTGGACTACCAGAACGCTGCGGCGGCAGTTGCTCACGCCGCAGCGATGGGGGTAGCGTTCATGCACCACCAGGACCCCACAGCGTCGAGTCTTTGTGTGAGCAACAGCAGCTCGCTGGACATCAAACCTGGGGTAAACATGCTGAGCACTTCGGCGTCGGCGGCGGGGACCTGCCCCGGAGGAGCTAACGCCTCTGGTGGCGTCAAGCAGAGAGAAGGTACATCGTCCACGGCTTCGAATAATAGTTCCGCTTTTTCTACATCATCTTCCGCAGCGTCTCCCGCGGAAGCATCTCCAAGGGACTCTTCGTCCTCACAACACCTGAGTGGGCCCCAGCAGCTCCACAGTTCCTCCTCCGCCCTCCATCCACAATCATCGCATGGCATGAGTAGTCAGTCGCATCATTACCCTCCGCCGCCACCCCTACAACCATCGCCTTACCACCACGACGCCGGAAGTGGCTCAACCCCATCATACATGGGTTACCCTTCTCATCACCTAAATCACCATCACCTGAACCACCACAGCATGtcccatcaccaccatcaccatcctGCCGCCATGTTTAGCACCAAGTCTCTGTCGGGGCACCACCAGATGGTGTCCGGATCTCCGGGCGTCACTGGAGCAGGTTCCGGGGCCGCAAACTCGAAAGCGTCCAGAACGAAATCCAGGTCTAGCGCCGAGGGACGAGAGTGCGTCAATTGTGGAGCAACATCGACGCCGCTGTGGCGTCGGGACGGCACGGGACACTACTTGTGCAACGCGTGTGGCCTATACTACAAGATGAATGGACAGAATAGGCCACTTATCAAGCCAAAGCGACGGCTGTCTGCGGCGCGGCGGGCGGGCACCAGTTGCGCCAACTGCAAGACGACGACCACGACGCTATGGCGCCGAAACCAGAACGGGGAGCCGGTTTGTAACGCCTGTGGACTCTACTACAAACTTCATAACGTAAACCGACCACTAACCATGAAAAAGGAAGGAATCCAGACCCGTAACCGGAAACTTTCCTCCaagtcaaagaagaagaaaggtgGCGTTCCAGGCTCCTGTCTTTCTCTAGGAGGCGTCATGTCAGATATGATCAAACCTCTGGATCCCACCGGGAAATCCGCGGGGTTCGGAACGGGGGCCGGTTTTGGCTCACCCATGGGAAGTGGTGCCAACATGCACCCACACCTGCACACGCATCACGCTGCCATGTCACACTATATGTACCACAACACCCACCACCAAGGGTTCATGAACCCGGGTCCTCCAGGACCTGTTCCCCCACCGGGACCGCCTCCTCATCATGGTATGCACCACCATCACATGACGTCGTTATCTGCCCTCGGCTCGGGCGGTCTTGGACTCGCAGCGACCTCAAACGGAATGACGAGCTGGAGATCAGAGTACACGTGA
- Protein Sequence
- MDMTASENGHHHHHHRWYEAPSRLAVDHHQSSSPSAASNGQSSNMGAGGLDPNSLLGVSSSGASAGSDHQTDMTASAVAEHMSSFFAAHHPSLAAVAAEGTGTHHHRAAAARYYHQQMHPSPYAASAASHAAAARMSAGSQVCRSHFHPSALPWLADTTKPMVGHGSAWCSPFGTSSSGGSGATSNSTDEKPPSLSPASTSHHSATAAAHHLFSFPPTPPKDATPDSVTAANTALTSSAAATSSAASASVDYQNAAAAVAHAAAMGVAFMHHQDPTASSLCVSNSSSLDIKPGVNMLSTSASAAGTCPGGANASGGVKQREGTSSTASNNSSAFSTSSSAASPAEASPRDSSSSQHLSGPQQLHSSSSALHPQSSHGMSSQSHHYPPPPPLQPSPYHHDAGSGSTPSYMGYPSHHLNHHHLNHHSMSHHHHHHPAAMFSTKSLSGHHQMVSGSPGVTGAGSGAANSKASRTKSRSSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGVPGSCLSLGGVMSDMIKPLDPTGKSAGFGTGAGFGSPMGSGANMHPHLHTHHAAMSHYMYHNTHHQGFMNPGPPGPVPPPGPPPHHGMHHHHMTSLSALGSGGLGLAATSNGMTSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00396942;
- 90% Identity
- iTF_00396942;
- 80% Identity
- -