Csec001007.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- -
- Assembly
- GCA_002891405.2
- Location
- NW:1400170-1407215[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00012 0.16 11.5 1.6 11 41 172 197 166 199 0.88 2 9 0.00072 0.99 9.0 0.2 16 33 203 220 201 226 0.81 3 9 0.00077 1.1 8.9 0.5 14 31 229 246 219 255 0.73 4 9 1.5 2e+03 -1.6 13.6 1 41 273 309 246 311 0.83 5 9 0.27 3.7e+02 0.7 0.9 16 29 315 328 311 335 0.79 6 9 0.00028 0.38 10.3 2.2 3 33 331 357 329 367 0.79 7 9 0.0094 13 5.4 4.4 14 41 369 393 358 395 0.83 8 9 0.00037 0.51 9.9 4.9 1 41 385 421 385 423 0.91 9 9 0.029 40 3.8 0.8 17 29 428 440 422 450 0.78
Sequence Information
- Coding Sequence
- atggatctgataATAACGGTAGAAGGAACAACTCCAGCTTCTACACCAAAGAAGGAAGAGCTTATTGATATAAAATATGAAGACCATTATGATCCAGATCCCACATCAGCAATCCCGAATGAAGATCAGCAGTTCTTGGATGCGGTTAAGACGGAACCTGATTCAGATAGTGAATTTGATCATGATCCACTCTCGAATGTCAAATATGAGGAGCCTGTTTGTGTACTACTCAAGAGTGAACCGTTTgaAGCATCAGATTCCACGTCAGAAGGTGATGAAGTAATGAAAGAGGAATGTGTCTCGAGCAGTACCAGTGAGCACAGTTTCATCAGCCACCAGTATGAAGAAAATGGTACAGAAGTTTCACCTCGGCTGACATCAGAAGGGATATCAATGAACGAAGTGTCTGGGATGTGTAGTAAGGGGTCCTCCTGTGGTGGAAATTTGAAGAATTGTACAAATGTGGACTCTGAAGAAATATTGCTGACAAGCTCAAAATGTAAAGACCGAGTGACAGAAAAAACCTTTACATGTGAAATATGCTCCAAAGTATTTCCATACAATAGTAACCTGAAACGTCATGTTCGTACACACACTGGAATTAAGTCATTTAAATGTGACATATGTGGTAAAGTTTTTTCAGAGAGCGGAAGTGTGAAACTTCACCTTCGGACACACACAGGTGAAAAGCCTTTCAAGTGTGACATATGTGGGAAAGTTTTCTCACAGAGTGGAAACCTGAAGCTTCACACACTCAGACACAAAGGAGAAAGAAATTTCAAGTGTAACATTTGTACCAAGGCATTCCTAAATAATAGTAAACTTAAACGACATATTCTTACACATATGAGAGAAAAATCATTCGCATGTGATACATGTGGGAGAGTCTTCTCACAAAGTAGACACCTGAAACATCACATACGTAGGCACAATGGAGAAAGATCATTCAAATGTGATGTATGTTCCAAAGTTTTTGCTAATAATACTGTACTGAAGTGTCACATTCTTATACACACAGGAGAGAAATCATTCAAATGTGACATATGTGGGAAAGTATTTTCACAGAGTGGTCATCTGAAACTTCACATTCGCACTCACACTGGTGAGAAGCCTTTCAAATGTAACATATGCACTAGAGCGTTCTCAGATAATAGTAAACTGAAGCATCACATTCGTACGCACACAGGGGAGAAACCATTCAAATGTGACACATGTGGGAAAGTGTTTTCACTGAGTTGGAATCTGAAGCATCACATGCGGACGCACACAGGAGAAAAGCCTTTCAAATGTGAGAAATGTGGAAGAGTGTTTTCAGGGAATAGAAGTCTGAAACATCATGCACTAACACATGTAGGAGAACCCCAATTTGAATATAATGTATATGAAAGATTTCCCCCAGAATGA
- Protein Sequence
- MDLIITVEGTTPASTPKKEELIDIKYEDHYDPDPTSAIPNEDQQFLDAVKTEPDSDSEFDHDPLSNVKYEEPVCVLLKSEPFEASDSTSEGDEVMKEECVSSSTSEHSFISHQYEENGTEVSPRLTSEGISMNEVSGMCSKGSSCGGNLKNCTNVDSEEILLTSSKCKDRVTEKTFTCEICSKVFPYNSNLKRHVRTHTGIKSFKCDICGKVFSESGSVKLHLRTHTGEKPFKCDICGKVFSQSGNLKLHTLRHKGERNFKCNICTKAFLNNSKLKRHILTHMREKSFACDTCGRVFSQSRHLKHHIRRHNGERSFKCDVCSKVFANNTVLKCHILIHTGEKSFKCDICGKVFSQSGHLKLHIRTHTGEKPFKCNICTRAFSDNSKLKHHIRTHTGEKPFKCDTCGKVFSLSWNLKHHMRTHTGEKPFKCEKCGRVFSGNRSLKHHALTHVGEPQFEYNVYERFPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00396510; iTF_00396927;
- 90% Identity
- iTF_00396510; iTF_00396927;
- 80% Identity
- iTF_00396510; iTF_00396927;