Csec008722.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- tfip11
- Assembly
- GCA_002891405.2
- Location
- NW:1092653-1104937[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.76 4.7e+03 -3.6 0.1 49 62 244 257 230 280 0.70 2 3 2.6e-97 1.6e-93 312.7 21.6 2 275 418 686 417 686 0.97 3 3 0.017 1.1e+02 1.8 0.1 243 271 699 727 692 731 0.83
Sequence Information
- Coding Sequence
- ATGTCAGAGGAAGAAGTGGAGAATTTTGAAATAACTGAATACGATTTGgaaaatgaatttaatattaACAGACCAACTCGCCGAATAAgcaaacacaaacaaatatacGGTATTTGGGCTGATGACAGTGGagatgaagatggaagtggaGGTTCCAGGCCAAGTTTTCGAGGTGCAGGCGGGCTAAGTGGAAAACATAACTATTCAACACCTGTTAGTTTTGTGTCAGGAGGAGTACAACAAGCTGGAAAACAGAAAGCACCCAAAAATAATAAAGACAAAATTGGTGATGACAGTGGAGATGCTGATGGTGATGAGGAAAATGATGATGATCTGGATGGCAGAAGAGGCAAGAATGACACTCCTAATTCATCAAGTGAGTCTGAGGAAGAAGGCCCAGTACGTGCATCTGCAAAGTTACAGTCACAGAAGCAACGTGTATTGAACCTCGATGGCGAAATAGCTGGTCTGCGAAAGAAACGTCCTGTTTTCAACCCAGCACTTATAAATAAGGGAATGGGAAACTGGGAGAAACATACGCGTGGCATTGGTGCCAAACTCTTGCTTCAGATGGGTTTCCAACCAGGCAAAGGTCTGGGCAAGGATCTTCAAGGCATAGCAGCTCCAGTTGAGGCTCATCTCAGGAAAGGCAGAGGAGCAATAGGTGCGTACGGTCCGGAGAAAGTTCAGAAAGTGGCAGATGTTCAGCCAGATTCAGAGGAAGAAGAAGCAAAAGAATTTGTGGAAAAATTATCCCAGTGGAGGAAGGGTGATATgagcaataagaaaaagaaagtgCGTTATACATACAAGAGCGTTGATGACGTGTTGGAGCAAGGCAAAACGACTAGCAGTGGCAGGAGAGAATACAGTCAGCTGAGTAAGGTGAAAGTGATCGACATGACCGGTCCGCAACAGAGGGTGCTGAGCGGTTATCATGCTATTGCTGGACAGCAGCGTCCTGCTGACGAGTGGGAACTCCGCAAAGACAAGAAGTTCGTAAACTTTGCGTTACCTGAGCTTCAACACAACCTGAATCTCCTGATGGACATGTGTGAGCAGGATATCATCCAGAATGATCGCAAGTTACGGTATACAAATGACCGCATTGTCATGCTCGAGCAGGAAGAGTTGTCTCTGAAGAAAGTGATCGAACAAGAGACTCGACATATAACAACACTGGAGTCTGTGCACAGTATGGTCCAGAAGTTGATAGACCAAACCAGTGACAAGTCTCATCCACTTACAATAGACAAAGCTATTGAAGCATTCAAAGAGCTGCAGGAAAAGTACTATGAGGAATATCGTCTGTATGAGTTGAGTGACTTAGCATCCAAACTTGTTGCACCACTTATAAAGGATCAACTTAACAGCTGGTCACCACTTGAAAATCCTCAGGAGCCAATGCCATTATTCAAACAGTGGAAGGACATCCTTGAAGTTGGACAAACCCAAACACTTACTAATATATCAACACAAGATCCATACCATTACTTGGTGTGGCAAGCCTGGATGCCCAGCGTCAGAACAGCTGTCAACAATTGGAACTGTCGAACGTGTGAACCCCTTATTGAATTTTTGGAACATTGGCTTCCATTAGTTCCCCCATGGGTACTGGATAACATTCGGGACCAACTTGTTCTACCCAGAATACAGCATGAGGTTGAGGAGTGGAACCCAATGACAGATACTGTTCCAATCCACGCTTGGATACATCCCTGGTTACCTTTGCTTGGAAATCGTCTGGTTGTGACTGTCTACCCAGTCATTCGCCACAAGCTGAGCAAAGCGCTTGTCAGTTGGCATCCATCAGACAGATCTGCCAAACTGATGCTGCTGCCCTGGCATGGAGTGTTCTCACGGGGTGACATGGATGCATTTCTCGTCAAGAATATTGTACCAAAACTGCAGCTCGCTCTGCAGGAGCTTGTCATAAATCCACATCAACAGCATCTAGATCAATGGCACTGGGTGATGGATTGGCAGGAATTGTTACCAGTACACAATTTGGCATCACTGCTCGAGAGATACTTTTTCCCCAAATGGCTTCAAATACTTACcatgtggctgaaacatgcaCCAAACTACGATGAAATCACAGAGTGGTACATGGGCTGGAAACGGATGGTGTCCGAGTCGTTGCTGGCCCAACCTGCAGTGAAAGAGCAATTTCGCAAAGCTTTGGAGCTGATGAACCGTGCTGTGACAGCACCTGGCCAGTCAATGGCTCACCAGCCAGGGGCAGTTGAATCAGTGTCTTATCTCACCAATCTAGAACAGTCATCCTCTGTGACACCTCCTCCAGCTCAGAGGGCAAAAGAAACAAGATACGAGATGCTTGCTGAAGCCGTTCGCACTGCAAGTCAGATCCCACAAGGTTTCAAGGAGTTAATACAGAAGCGTTGTGAAGAGAGAGGAATCGTGTTCATGCCCTTACCTAACCGATACCGCGAAGCTAAGCAAGTGTATCGCTGTGGGAAGATCCAGATATATATTGACAGGAGTGTTGTGTTTGTCAGTGAAAATGGTAGTGTGTGGATTCCAACCGCGCTGAATAATATGCTGGATATGGCTGCCTGA
- Protein Sequence
- MSEEEVENFEITEYDLENEFNINRPTRRISKHKQIYGIWADDSGDEDGSGGSRPSFRGAGGLSGKHNYSTPVSFVSGGVQQAGKQKAPKNNKDKIGDDSGDADGDEENDDDLDGRRGKNDTPNSSSESEEEGPVRASAKLQSQKQRVLNLDGEIAGLRKKRPVFNPALINKGMGNWEKHTRGIGAKLLLQMGFQPGKGLGKDLQGIAAPVEAHLRKGRGAIGAYGPEKVQKVADVQPDSEEEEAKEFVEKLSQWRKGDMSNKKKKVRYTYKSVDDVLEQGKTTSSGRREYSQLSKVKVIDMTGPQQRVLSGYHAIAGQQRPADEWELRKDKKFVNFALPELQHNLNLLMDMCEQDIIQNDRKLRYTNDRIVMLEQEELSLKKVIEQETRHITTLESVHSMVQKLIDQTSDKSHPLTIDKAIEAFKELQEKYYEEYRLYELSDLASKLVAPLIKDQLNSWSPLENPQEPMPLFKQWKDILEVGQTQTLTNISTQDPYHYLVWQAWMPSVRTAVNNWNCRTCEPLIEFLEHWLPLVPPWVLDNIRDQLVLPRIQHEVEEWNPMTDTVPIHAWIHPWLPLLGNRLVVTVYPVIRHKLSKALVSWHPSDRSAKLMLLPWHGVFSRGDMDAFLVKNIVPKLQLALQELVINPHQQHLDQWHWVMDWQELLPVHNLASLLERYFFPKWLQILTMWLKHAPNYDEITEWYMGWKRMVSESLLAQPAVKEQFRKALELMNRAVTAPGQSMAHQPGAVESVSYLTNLEQSSSVTPPPAQRAKETRYEMLAEAVRTASQIPQGFKELIQKRCEERGIVFMPLPNRYREAKQVYRCGKIQIYIDRSVVFVSENGSVWIPTALNNMLDMAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370221;
- 90% Identity
- -
- 80% Identity
- -