Basic Information

Gene Symbol
lilli
Assembly
GCA_002891405.2
Location
NW:643144-1033465[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 3.6e-13 4.5e-09 35.6 0.0 4 121 21 140 19 159 0.75
2 9 1.2e-06 0.015 14.1 30.4 349 513 242 457 221 458 0.62
3 9 0.18 2.3e+03 -3.0 1.1 434 471 493 527 479 568 0.53
4 9 1 1.2e+04 -12.7 28.0 74 229 575 721 554 755 0.41
5 9 1 1.2e+04 -5.9 13.4 82 232 701 852 695 887 0.54
6 9 1 1.2e+04 -11.0 25.6 377 482 873 993 867 1016 0.60
7 9 0.03 3.8e+02 -0.5 5.2 135 190 1127 1181 1079 1202 0.39
8 9 0.044 5.5e+02 -1.0 29.9 86 255 1261 1424 1237 1439 0.39
9 9 0.74 9.2e+03 -5.1 1.0 149 162 1507 1520 1477 1540 0.36

Sequence Information

Coding Sequence
ATGTCTGGATATTATGACGGTCCAGCCAACCCGCTGCTCAAAGGGACTTTGTCCAGCGTGGAGCGCGACCGACTCCGGGAGCGGGAAAGACAGGCTCGCGCGCAGATGTCATCTCAAGCCGAGCGTGAAGCCGAGAATCTGGGGGCGCCATTCTTCGGGCCGCCTGTCAGGGTGCTCCCCTCAGCTGCTGACAAAGTAACCCGGCAGATACAGAGTAAGTTGGGCGACTATGATGCGGTGCAGCAGATCCTGGAAGATGATTCCAAACGCTTGATTGGAATTGATGGTGTCCCTCCCAGCCCTGCACCTGGGGGCACCCATGCTTTCTTCTCAGCTGCCAGTACACGACTGCAGCAAACTCCGGAATTCAAGAAGCCATCTTCACATCAGCATGGCAGTGTTGTGAGTAACGGGAGGGTGAACAATCATTACCATCCTCACAGTGCTCCTCGAGGTGGGTTTGTGAAGCCTGCAGATGGGAAACCGCCTCATGGGGGTAGGGGCGGATATCCTGGACAACCTGTGAAGCATGGTGGAGGCAGCAATGATCATCGGTCCAATGGTGGCATTGTACCACCAAAAGGACCGCCTCAAGGTGGAGGTGGTAGCAGTAATAGCAGAGTGCAGCAAGTTGCGAGGACTCTTCCAAGATTAAATGTTAACCAGATGTCAGGGCTGGGACAAAGGGAGTCATCACATCTGGGTAGTGCTGGACAGCCTGAAGTTGAATTCATTCTGAAGGAAATGACAGAAGTGATGGAGATGACCCCTATCACTGGTATAGCGACCCCAAGGAAGGAGACTGAAAGCAAGTTTATATTCAATCCTGTTCTTCAGTTGCCGGAGTATGCCATGCCACCGACCCGCCATGCAGACTACAGTAAAACCCaaCGGAGCAGCCAACCGCAATCTCAGATTCCAACGGACGTGGTACCAGATCCACTCTCCGACCTGATCATCTCAGATGACAGTGATGACGAAAAGGTGGTGCTCAACCCCGAGTCCAAGCTCCATGGATCCTCGAACCAAATGGACGAGCCAAGAGGTGGTCCTTGTGCTGCTGCAATATTGACCGCTAGTCCAACCCCTGGCACACTAAGTATTGGCAGTAGACCTACTGAGCCTGTGGCACCCATGTCCCCGGTGGGTCCTCCCCAATCTTCAGGGGCTTGCAGCTCATCCAGCGAGGACGACTCTGATTCTGAATCAGACAGTGAGTCAAGCAGTGAAGAATCGGGGGATGAGGCGTCTCATGAACCTGTGGATTCTGCAAGGGGCACCACTGCCCCACAAGCTCATTTGTCTCCACAAACTATGGAGCCAATGGAAGAGACAAAGCCTCAAGATAGATGGAACTTGGAAAGGTTTCTTAAAAGAGAAACACAGTCTCTTGGAGGAGAGCAGCCAGTAGAAAGTGAACATTCAACACTTTGTAAGcTGGAATTTGTGAAACAGGAGCCTTCCTCAGCAGCAGTAACCACTGCAGTTCCTAGCAGTCTACCAGAGTCAAACCCACAACAGCCTGCAGTTGGGACCAAAGTGAAAATAGCGAGTGGTGCAGTATCAGATGGCAGTGACTCCAACAAAGAGCTGGACAATGTAGTTGAGGCTCTTCAGCGCCCTCCTCTTCCACTCTTGTCTAGTCTCTCTGAATCCGATTCTGCAGACAGCGCTAAGAAGAAACCAGTGCTCACCGATACAAGATCAAGACGGAAACGTCCAACTCTACCCACCCGGGCACCAGAGCTGTcgagtgacagtgacagtgaaagTGTGATGATCATCAGGGAAAAAACCAGGCCGGCCAACCGAAACAAGACACGTCCTAAGAAGGAACCAAGGACCCCAAGTACATCAGATGAAGAGCTGCAGTCTCCAAAACAACCAACTGTAAAGCAGCGAAACAGTAACAGTCACAGTGTTAGGTCAAAACCCTCTCCATCTCCAGCCCGATCTGTGGGTAAGGTAGATGATCAAAGGAAGAAACATGGGGAAAGGACTCCAAAACAAACTCCCAACAGGGCTCAAAAGCAGACTCCTAACAGGACTGTGAAACAAACTCCCAGTGTAAGTAGTGATGTGAGGAAGCCTCCACCTCCATCACCTAGTGAatcagaagacgaggaagcCGTAGTGCCTCAAGGAAGAGGCCAGTCTTCTTCTAGTACATCAGATGGTGAAATTAAGGATTCTAAACCATCAGTGAATGTAAGACCCAAACCACCCCTCTCGGCACCAAGTGGATCAGATGATGATTCAGATGGAGGTAAACAAGGTTCAGGAGCAGTTACCAAGCATGCCAATGCTCACAGCCGCTCTGAAGATGAAACTGCGAGTGTTAAACCAAGAGACCAGCATGCAGCCAGCAGAGAAACTTTCAGTGTAAGGGAAAAACTGCTGTTAAGCCCATCAGATGAGGAAGGTGAAGTTGATAGGAGGAGGGGAAATGTTTCAACAAGCAGGCCAAAACTTCACTCTCCTTTGCCTCTTAGCGGGTCTGAGGAAAGGGATGGTGAGTGGACAAGGAAGAACAGCAAAGTTCAGGGCAATGTTAAGAAGGCTGGTAGAGGTAGAAATAAGGCAAGACCTGGTGGAATGCCAGcacaagaagaaaagaaagctACTGTTCCAAAGAAGGAGAAGGGTCCAAAAGGTTCTGCCACCAGGAAAAGGACTAAGGAAGACGTTACAAGTGGTCCAAAGAAACAGTCTGGGCCTGGGAGGCCTTATGCTAGGAGAGGTCAGAAATCAAAGGCGATGAAAAGTTGTTATACCACAACAGAGTCGTCCTCAGATAGTGATTGTGAGATAGACGTTGTAAACACATCGTCGGAAAAGACTACAAGGTCTTTCAAAGCCAAGAGTCAGCGGAATCACAGTCCCGATTCCAGTTCTGACTCTGGCCAGGGCAGGAagaagtcagccagtctgtctaaGAGGAAGCACTCCTCAGACAGTGACAGGGACAGTGACAGGTCTCGTATTTTGTCCCGCCCACCTATGTCGAAGGTAGAAGAGAGTCCTCCAAAGTTGGATACAGAAGGCAAAGCCATCCAAGACAAGAAGAAAAGTGATACCTTGAGAAAACTTTTCGTTCCTACTAAGGGAGGTGCCAAAGGTGGGGCTAAAGGGGGAGCAAAAGGTGGTGCCAAAGGGGGTATATATTGTGCCAGTGGGGGTGGGAAAGGTGCTGGTGCGAAGGGCAAGGGAGGATCAAAAACTCCCGGTGTTCTTGTAGTGGAGTGCGAGTCAGAAAGGACGTCTTCTTCAGTGGAAGATGAGGGTGTACCAACCCCAGTGAGCCCTTGTTTACTGTCCCCATTATCAGGTAATGACACAGTAAcaacaaacaagcaaggaagTGCAGGTTTTGTTGTAAATTCAAGTCCAGCGAAGACTGATAAGTGCAGTACGACGTCTGGAAAGTCAGGTGCAAGAGCACATAGTTCTGAAAAACCTTCACGGCGAAAGTCCGCAAAAAAAGAGTCTGAAAAACTGTCTAAACATTCTGCAGCAGTCAAAGTCAGGCGTGATACTTCGTCAAACAAGAAAACTGCACAAGACACACCAAAAGTGGAACTTCCTTCAATTGTGTATCGTTCTGATGGAATTCCAAGTATTATCTGTCGTTTGGATCTGTCTAGACTATCTCAAATCCCAATTCCAGGAGGCCCTGGTAAGAGACCTAGTGGGGGTGAAGACGTTAGGGTACGAACAGAATTAGCAGATACAAGGCAACAGGGTGGAAGTGACCCAGACCATAGTAGGAAGGACAAAAAGCAGAGGACTCAGTCACCTACTTGCAAGGAGGGAGACATAGTGATACCAAAGTGTGATAAAAATAAGAACACAGATAAAGTGGTACAGGAACAAGGTTGTGACAGTACGACAGTTAATCATGAGGCTTCCAAGAAGCAAAAGAAGAGGAAAGTTAGCAGAAATACTGACAATTCCAGCACCAAAAACCAACAGGAAATCAGAGATACTACACAGATAGAAGGGAATGTGAAACCTGCTGGTAAATCCAAACATCACAAAAAGAACAGCGATAGTAATGGGCATAAACGTCAACGTGAACGCAAGCCAAGCGGCAGCTCTGTGTCTTCATTGTCAACAGAATGCAGCCGAGTATCGTCACAAGGTGGCAGTGGCCAAAGGCACCGTGAAAGACATAACCGTGAACATGGTTCAAGCAAGCGACGTAAAGTTCAACAGCAGCAACCTGAGGAGTCCAGTGAACATGCCACATTAAGGTTATCTAGTCAAAGCACAGTAGCTCTCAAAGATGTGCCTCCAACAAATCATGAGCGAGAAGATAACAGTGATGAGATGGTAGCTGCAGCTGGAAGCGAATCGCCAGGTTGTTCTCGGCTGCACTATTCTGAGGGTCCTCTGCTAAGTTACCCCATACCTCCTGGACATGGCTATCCCATGTCAGCCATGAACTGGTCACATGCTACACAGAAAGTGTACTTCTCTTATTTTGAACGAGAAGATGACGATGCCTCGGAAGATGAGGACAGGGATCAGAACCAACAGAATCAGTACCTGAAAGAAGCCAAGAGGTTGAAGCATGGGGCTGACAGGGAAAAAGACCACACAGCACAGGGAATGCAGTACCTAGAAGCTGTGCTATTTTTCCTTCTCACCGGGAATGCTATGGAACATGAGAGTTGCACTGAGAAAGCAGCTTTCACCATGTACAAAGACACTCTGAGCCTCATCAAGTACATTTCTTCAAAGTTCCGATCTCAACAGAACAATTCTCCACAAGGCAGCATAGATAACAAACTAGAAGTTTTAAGTCTGCGATGCCAGTCACTGTTGTACCTCAAATTGTTCAAAATGAGAAAACATGAAGTAAAAGAATATCAGAAGGTTCTGGCTGATTATCATCAGAAGGCGGCACAACCAACACCACTGCAGCCAGAACAGTGTGGTGGGCAGGTGGTGGGCGGGCAAGGTACTCCTTCCCCAATGTCTCCTACTCCATCCCCAGCAGGGTCTGTTGGATCAGTAGGAAGTCAGTCATCTGGGTACAACAGCGGTGATGTGGCTGCAGGGAGAATGGGTGGTACAGCAGGAGGCAACAGCATGGGACAGCAGCCCCCGGCTGCCAACATGGGCCCTTGtgttgctgtaccattgttTGTACACTCAGCAATGCAGAAGCAGAACCAGCACTTCACCTACCTGCTGTCATGCCATGAACTGTGGGAGCAAGCAGATACGCTTGTTCACAAGGGCAAACACAAGTATTTCTTCATTCAGCTTGACCAGTGTTGTGGACCTCTTACGTTACATAGTTCTCTGAACGACTTGGTGAAATACGTAAGATTTGGAATTCAGAGGCTGAAGGACGCATGCTGTGGTGATGAGACTGTTCAACTTCAGTGA
Protein Sequence
MSGYYDGPANPLLKGTLSSVERDRLRERERQARAQMSSQAEREAENLGAPFFGPPVRVLPSAADKVTRQIQSKLGDYDAVQQILEDDSKRLIGIDGVPPSPAPGGTHAFFSAASTRLQQTPEFKKPSSHQHGSVVSNGRVNNHYHPHSAPRGGFVKPADGKPPHGGRGGYPGQPVKHGGGSNDHRSNGGIVPPKGPPQGGGGSSNSRVQQVARTLPRLNVNQMSGLGQRESSHLGSAGQPEVEFILKEMTEVMEMTPITGIATPRKETESKFIFNPVLQLPEYAMPPTRHADYSKTQRSSQPQSQIPTDVVPDPLSDLIISDDSDDEKVVLNPESKLHGSSNQMDEPRGGPCAAAILTASPTPGTLSIGSRPTEPVAPMSPVGPPQSSGACSSSSEDDSDSESDSESSSEESGDEASHEPVDSARGTTAPQAHLSPQTMEPMEETKPQDRWNLERFLKRETQSLGGEQPVESEHSTLCKLEFVKQEPSSAAVTTAVPSSLPESNPQQPAVGTKVKIASGAVSDGSDSNKELDNVVEALQRPPLPLLSSLSESDSADSAKKKPVLTDTRSRRKRPTLPTRAPELSSDSDSESVMIIREKTRPANRNKTRPKKEPRTPSTSDEELQSPKQPTVKQRNSNSHSVRSKPSPSPARSVGKVDDQRKKHGERTPKQTPNRAQKQTPNRTVKQTPSVSSDVRKPPPPSPSESEDEEAVVPQGRGQSSSSTSDGEIKDSKPSVNVRPKPPLSAPSGSDDDSDGGKQGSGAVTKHANAHSRSEDETASVKPRDQHAASRETFSVREKLLLSPSDEEGEVDRRRGNVSTSRPKLHSPLPLSGSEERDGEWTRKNSKVQGNVKKAGRGRNKARPGGMPAQEEKKATVPKKEKGPKGSATRKRTKEDVTSGPKKQSGPGRPYARRGQKSKAMKSCYTTTESSSDSDCEIDVVNTSSEKTTRSFKAKSQRNHSPDSSSDSGQGRKKSASLSKRKHSSDSDRDSDRSRILSRPPMSKVEESPPKLDTEGKAIQDKKKSDTLRKLFVPTKGGAKGGAKGGAKGGAKGGIYCASGGGKGAGAKGKGGSKTPGVLVVECESERTSSSVEDEGVPTPVSPCLLSPLSGNDTVTTNKQGSAGFVVNSSPAKTDKCSTTSGKSGARAHSSEKPSRRKSAKKESEKLSKHSAAVKVRRDTSSNKKTAQDTPKVELPSIVYRSDGIPSIICRLDLSRLSQIPIPGGPGKRPSGGEDVRVRTELADTRQQGGSDPDHSRKDKKQRTQSPTCKEGDIVIPKCDKNKNTDKVVQEQGCDSTTVNHEASKKQKKRKVSRNTDNSSTKNQQEIRDTTQIEGNVKPAGKSKHHKKNSDSNGHKRQRERKPSGSSVSSLSTECSRVSSQGGSGQRHRERHNREHGSSKRRKVQQQQPEESSEHATLRLSSQSTVALKDVPPTNHEREDNSDEMVAAAGSESPGCSRLHYSEGPLLSYPIPPGHGYPMSAMNWSHATQKVYFSYFEREDDDASEDEDRDQNQQNQYLKEAKRLKHGADREKDHTAQGMQYLEAVLFFLLTGNAMEHESCTEKAAFTMYKDTLSLIKYISSKFRSQQNNSPQGSIDNKLEVLSLRCQSLLYLKLFKMRKHEVKEYQKVLADYHQKAAQPTPLQPEQCGGQVVGGQGTPSPMSPTPSPAGSVGSVGSQSSGYNSGDVAAGRMGGTAGGNSMGQQPPAANMGPCVAVPLFVHSAMQKQNQHFTYLLSCHELWEQADTLVHKGKHKYFFIQLDQCCGPLTLHSSLNDLVKYVRFGIQRLKDACCGDETVQLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-