Csec012082.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- bab2
- Assembly
- GCA_002891405.2
- Location
- NW:25207-42553[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-05 0.062 12.5 0.1 2 35 219 252 218 259 0.91 2 4 9.7e-12 1.5e-08 33.7 0.0 3 39 270 305 268 310 0.89 3 4 0.058 91 2.4 0.0 23 37 344 358 328 366 0.76 4 4 1.1e-10 1.7e-07 30.3 0.1 4 38 386 420 383 425 0.91
Sequence Information
- Coding Sequence
- ATGAGTACCAGGCCACAGCATTACTGTCTGAAGTGGAACAACTACCAGAGCTATGTGGCAGAAATATTTACACAGCTCCTCCAGGCAGAATCTATGGTGGATGTGACGTTGTGTGCTGAGGGTCATAAAATACGTGCACATCGTATTGTTCTGTCTGCATGTAGCCCTTACTTTCAGGATATCCTGACCAATACAGAAGATTCCCATCCCTATATAATTTTAAGTGAAATGAATTCTGATGATGTAAAATCAATTGTTGAGTTCATATATCGTGGAGAGCTAAATGTTGGTGCTGATCGTTTCACATCAGTACTGAAACTAGCTGAAGAATTGCAAATAAGAGGCCTCATGGAAGTCAGTAACCATTTACCGATATTGGTAAATAAAGATGGTGATGAATCTAATCCAGAACCTCTGTCGTCAACTCCAGCATTGGAAGAAAATCATAACTCAAGCCAGTGTTCAGATACATTGCCTGATATGCCACAGACAGATTCAGTAGATATTTTCATGGAAGTTTCTGAAAATGTGCATGAAGAGCCTTCCACAGAAAGTACAAAATTGGAATCAAAGGAGCACACCCAGTTTGAGAAGAAGGGtgaggaagagaagaaaaagaaacacagaAGAGAAACAAGCAAGAAGTATTACAGTGAAGATATGTTGTTGGCAGCACTAGAGGATTTACGAGCAGGGCGATCTCTTGTGGAAACAGCTGCAGCATATCGCATCCCTCGCTCAACTCTGCATGTGAAAGCTCGAGCACAAGGCATTGCTCTTACCATCACCAGACAGGAACACTCTGGTGAGAGAGTACAAGCAGCAATCCAAGCTGTTGCAGATGGTGCAAGTTTGCAGCAAGCAGCTGATCTCTTTAAGATTCCAAAGACAGTGCTTTGGCGACGTGTGCAGAAGGAAATTGGGAGTTATGCAATGAGTTTTCGAGCAAAGCTGAAGCAGTCATATGGTTCAGATAAGAAGCAGGCGGCAGTAAAGGCATTGGAAAGGGGAGAGAACCTCACTAAGGTGTCACACCAGTTTCAGATACCAAAGACAACTTTGTTTCGTGAAAAGGCACGTTTGGTAGAAGCTGGAAGGCTTCCATGGACATGTCTGCGAAAGCGGGATCCTGATATCGGAGGCTTCAAGCAGCACAGACTCAGCGAAGCCGTGGCAGCCTGTAAAGAGGGAAAGATGTCGCAGGCAGTGGCTTCTGTTACCTTCCAGGTTCCTAAAACTACAATATGGCGGAAGCTTCAGCAGAGTTCAAGGTCAGAATTACCAGAACGTGAGGAGAATGAAGCTGATACTGCTGCAGCCCAACTGCAGGAACGCACAGAATTTGCATTTAGCGAGGTTTCAACACAAATTCCAGTCACTTACATCGATGAATCAGACTTCTCTGAAGCTTCTCTTATCATTCTCACTACTGGCGGCAGTGAAAGCATGGAAGAGCAGATTATAGTCAATAGGGATGCCATACCTGATGAAAGCCAAGTATCCAAGAACCATCCGGCAAAAGAAGTGTCTTTAGCAACGAATGGCTCCAACCAGAATGCTGATTCAGTTACATAA
- Protein Sequence
- MSTRPQHYCLKWNNYQSYVAEIFTQLLQAESMVDVTLCAEGHKIRAHRIVLSACSPYFQDILTNTEDSHPYIILSEMNSDDVKSIVEFIYRGELNVGADRFTSVLKLAEELQIRGLMEVSNHLPILVNKDGDESNPEPLSSTPALEENHNSSQCSDTLPDMPQTDSVDIFMEVSENVHEEPSTESTKLESKEHTQFEKKGEEEKKKKHRRETSKKYYSEDMLLAALEDLRAGRSLVETAAAYRIPRSTLHVKARAQGIALTITRQEHSGERVQAAIQAVADGASLQQAADLFKIPKTVLWRRVQKEIGSYAMSFRAKLKQSYGSDKKQAAVKALERGENLTKVSHQFQIPKTTLFREKARLVEAGRLPWTCLRKRDPDIGGFKQHRLSEAVAACKEGKMSQAVASVTFQVPKTTIWRKLQQSSRSELPEREENEADTAAAQLQERTEFAFSEVSTQIPVTYIDESDFSEASLIILTTGGSESMEEQIIVNRDAIPDESQVSKNHPAKEVSLATNGSNQNADSVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288889; iTF_01289113; iTF_00396414;
- 90% Identity
- iTF_00396414;
- 80% Identity
- iTF_00396414;