Cacu012243.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- bab1
- Assembly
- GCA_963556235.1
- Location
- OY744561.1:8263923-8265762[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-15 1.3e-12 47.9 0.1 2 45 360 403 359 403 0.94
Sequence Information
- Coding Sequence
- ATGGGTTCATCACAGCAATATTGCCTGCGATGGAACAACCATCGATCAAACCTGCTAACCGTGTTCGATGAGCTTTTGCAAAATGAAGCTTTCACCGACGTGACATTAGCTTGCGACGATGGCGGTCCAATCAAGTGCCATAAAATGGTTTTGGCTGCATGTTCACCATACTTTCAAATTCTCTTCACCGACTTGCCATGCAAACATCCAGTGGTCGTACTGAAAGACGTCAAGTACTGCGAGATCAAAGCCATATTAGAGTACATGTACCGCGGTGAGGTGAATGTAGCTCAAGATCAATTAGCCGCTTTGCTGAAAGTGGCTGAAGCGCTGAAGGTAAAAGGTCTAGTCGAGGAGAATAGATCCAGTAGCAAAGCGAGTCATCGAGATGACGAACATTTGAACCATTCACCATCCATCACCACATCGAATTCCATCATGCAGAACACGGTGCATAGTAGTAGCAGCAATAATTCACCCCCACATTCCACGAATTCGATCTACAAGAACCCCTACAGTATTTACGGTGGTGGCAAGGAGCACAGTTCCCGAATGAATCTACCATTGTGGGCCGTTCCCGGCTTACCTCTGCCTCCATCCGCTTCTGTTCCAAGTCCAAATCATCCACATGCAGCGGCTAATGCTGCTGCTGCCATGCTGAGCAGCTGCTACGAAGCTGCCAGCTCCGATATGAATCCCTTGAAGCGCAAGAAGCTTTCCTCGCTACTGATGCAACGTGACACACCCATTCTGCGGACGGTACTTGGACAAGGACAAGCCGATTCCTCGCAACCTGTTAGCTTGGTCTGCCATCCCGACAGCAATAACGACAAACATAGCAATGGCTATGACGAGGGCATGATCAAGCACATGAAAAACGAGCCTTCCGAAGACGCTCAAAGCCCCTACACCGACTTCGCAGTGAACCTGAACGACGATGACGACACCAAATCGAAAATGGCAATACCTTCTTCATCCCCCCAATCCTACGCGAACGATACTCGAGGTGTATCTTCAGGAATCGCCACTTATGTGCCTACCCAAAAACCGGAATGGAAACGATACAAACAATACACCCCGAATCATATTCGCGCCGCTATTGAAGCGGTACGAAATGGAATGTCAGCCTTACAAGCCGCCCGAAAATACGGGGTACCATCGCGCACCCTTTACGACAAAGTGAAGAAGTTGGGCATCACCACCAGTCGACCCTTCAAACGCGGATCGAACGGAAGTTCGGCTTGTTTCCCTTATAATTCCGGTTCGCCTTATAGCGGACAATTGTCCGAAAGCGATGAAGCCTCCATTAACAATAATTCCGCCTTATTAGAAGCCAGCACTTTCCTGCAGCACGCCTTGGACAGCCGAGGGTGTGACGAGCGGGAGACTTTGGCGGTCATGGCGGCGGCTGCCGCCGCTCATGCAGCTGCCGCTGGCCATTCGACCAGTCCAAGCAATGATGGACATGCCAGAAGTCCCAGCCCCAGTCCGACTATGATCAAGTACATGCGGCAGAGCAGTTTGACGCCATCGCCAGCGCCTGGAAGTGAGAACAATCACAGCGAGACGAACGGTAGCTCGGAACGAGATCGTGACGATGATGAGGACCAAGTCGAGGATTTGTCCATCAACCGCAAACAAGTTATTATGCCACCGATGAACCAAGTCTCCGCTATTATGAAGAAAGAAGAGATGCTGATTGAAAGTATAAAGAAGGAGGTGCGGCGCGAGGTAAGCCTTGATCGCGATGATAATTAA
- Protein Sequence
- MGSSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDDGGPIKCHKMVLAACSPYFQILFTDLPCKHPVVVLKDVKYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSSSKASHRDDEHLNHSPSITTSNSIMQNTVHSSSSNNSPPHSTNSIYKNPYSIYGGGKEHSSRMNLPLWAVPGLPLPPSASVPSPNHPHAAANAAAAMLSSCYEAASSDMNPLKRKKLSSLLMQRDTPILRTVLGQGQADSSQPVSLVCHPDSNNDKHSNGYDEGMIKHMKNEPSEDAQSPYTDFAVNLNDDDDTKSKMAIPSSSPQSYANDTRGVSSGIATYVPTQKPEWKRYKQYTPNHIRAAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPYNSGSPYSGQLSESDEASINNNSALLEASTFLQHALDSRGCDERETLAVMAAAAAAHAAAAGHSTSPSNDGHARSPSPSPTMIKYMRQSSLTPSPAPGSENNHSETNGSSERDRDDDEDQVEDLSINRKQVIMPPMNQVSAIMKKEEMLIESIKKEVRREVSLDRDDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00395579;
- 80% Identity
- iTF_00395579;