Cacu020548.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- retn
- Assembly
- GCA_963556235.1
- Location
- OY744567.1:3356073-3358261[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 1.1e-13 52.1 0.1 29 89 4 62 1 62 0.93 2 2 2.2 9.3e+03 -2.2 0.0 25 38 203 216 162 218 0.69
Sequence Information
- Coding Sequence
- ATGGCAAAATCAGTCCTTGATCTCTACGAACTTTATAATTTAGTAATAGCACGAGGTGGACTGGTGGATGTGATCAACAAAAAACTGTGGCAAGAAATCATTAAAGGACTTCATCTTCCATCTTCAATTACATCGGCTGCTTTCACATTAAGAACACAatACATGAAATATTTATACCCGTACGAATGCGACAAACGCCGATTAAGCACCCCAGCCGAATTACAAGCAGCGATCGACGGAAATCGCAGAGAAGGCAGACGCAGCAGTTACGGCCAATACGACTCAATCCAAAGATCTCCAAATCCAAGCCATCAAATGTCACCATTATCACTAGTGTCCCAACAGCAACAGCAGCAGATTGCGCGCATGAATTCGGTGATGAGTGGCGGTTTGAATCTGCACAACGGTGCGCATCATCCCAGCCATCCGCAACCACTCGGCCAACCCTTAAACGGTGGCCCTTTGCCCGGTTTAGCACCGAGCGAGTTCGAAGCGAGGATGATGGAGTAcgttaaattattgaataagGAAATCCGCAGTTCGGCAGCTACGCCACCAAGACATGGTGGTGATGTTAGTCCACCGAATGATACTTCACCGTTGAACCATCTGGAGATGTCGCGGATCACGTTGTGGAATCTGTACAATAATAATCAACCGCCAGTCGAACCGCAGAAGGAGCCGATGAATTTATCTGAGAGTGTACAAATTAAGCGGGAACCGGAATCAAGGGAGTCACCACCACCGGCGAAGAAGGTCCATAAGGATGATGAGGACTCGCCGAAAATCCTGTCGCCTTCCAcacatattaaaattaacagtcGAGGGGACGCCCGGAATGGTGACAACTCCCTTGTGGTGAGCATGGAGCTGAATGGTATTACATACCAAGGGGTTCTATTTGCACAAAGTTCACCTTCGAGTGGTCGAACAGCGATCGCTTCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKRRLSTPAELQAAIDGNRREGRRSSYGQYDSIQRSPNPSHQMSPLSLVSQQQQQQIARMNSVMSGGLNLHNGAHHPSHPQPLGQPLNGGPLPGLAPSEFEARMMEYVKLLNKEIRSSAATPPRHGGDVSPPNDTSPLNHLEMSRITLWNLYNNNQPPVEPQKEPMNLSESVQIKREPESRESPPPAKKVHKDDEDSPKILSPSTHIKINSRGDARNGDNSLVVSMELNGITYQGVLFAQSSPSSGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- -
- 80% Identity
- -