Cmon019489.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000062.1:67121201-67123798[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0066 1.8 10.9 1.0 1 23 37 60 37 60 0.97 2 22 0.14 39 6.6 1.6 1 23 66 89 66 89 0.93 3 22 0.002 0.54 12.5 0.9 2 23 102 123 102 123 0.98 4 22 0.0096 2.6 10.3 0.6 1 23 166 188 166 188 0.96 5 22 1.8 5e+02 3.2 1.6 1 23 194 217 194 217 0.75 6 22 0.02 5.4 9.3 1.7 1 23 228 250 228 250 0.97 7 22 0.017 4.6 9.6 1.6 1 23 293 315 293 315 0.97 8 22 0.66 1.8e+02 4.6 3.3 1 23 321 344 321 344 0.97 9 22 0.00016 0.044 15.9 0.4 1 23 357 379 357 379 0.98 10 22 5.6 1.5e+03 1.6 0.8 1 11 385 395 385 407 0.67 11 22 4.5e-05 0.012 17.7 0.2 1 23 425 448 425 448 0.97 12 22 0.00064 0.17 14.0 3.9 1 23 454 477 454 477 0.98 13 22 0.028 7.6 8.9 1.1 1 23 487 510 487 510 0.96 14 22 0.041 11 8.4 2.3 2 23 556 577 555 577 0.97 15 22 0.3 81 5.6 1.7 1 23 598 621 598 621 0.95 16 22 0.0024 0.66 12.2 6.4 1 23 627 650 627 650 0.97 17 22 0.0073 2 10.7 2.2 1 23 661 684 661 684 0.97 18 22 0.0028 0.77 12.0 2.0 1 23 698 720 698 720 0.98 19 22 0.085 23 7.3 1.4 1 23 726 748 726 748 0.97 20 22 0.89 2.4e+02 4.1 2.1 2 23 756 778 755 778 0.94 21 22 0.35 94 5.4 0.5 1 21 784 806 784 810 0.91 22 22 0.00074 0.2 13.8 0.2 1 22 837 858 837 858 0.95
Sequence Information
- Coding Sequence
- ATGACAATAATTTTCAGATGTAACCTCCCAGAAACAGATCAAGGTGACTTTAATCAACCTGGAACATCAGACATGAGTACTTTCGCAGATGCACGCGAAGAACAACTTTATCCATGTCGCTACTGCGAATATGTTGGAAACCATCCAAGATTGTTGAGTTCCCACATGAACAATCGCCATACTAAATCGGTAGTGTATCAATGTCCCCATTGCCCATACAATTCTACTATTTCTAAAAGTACTAGAGACCATGTCGACACTAAACATTGCAATGAAGATGATAAACCAATCGATATAAAACGAAAATGTCAATTTTGTGATTACTCGGCTAGTAATGCTActgtgttgaaaaatcacatgAATAAACACACTGGAGAAAAACAACATCAATGTTCTTTTtgcgatttccatactctttGGGAGGGATATTTAAAAATGCATATTAGACGAAAACATGGCGACCAAACTATGGACACTGGAAACCCTGCAAAGGAATATCCTTGTCAATATTGTGATTATAAAGCTTTAACCCCAAGTTCTCTTAAACTTCACACAAATAAACATACCAGAGAACAAGAACATCAATGTCCATATTGTCCATATAAAACAGTTTGGACAACTTATATAAAATTACATATAAAGAATaaacatttgaaagaaaaatctcCAGCTTCCAAAGAATTCGCTTGTAATTTTTGTGACTATAAAGCTAAAAATACGACTTTATTAAAACAACATGAGAATAAACATACACGAGAAAAAGTAAATCAATGCCCCCATTGTCCATTTACTACCTTATGGATTACATACATGAAGCTTCATATTAAACGAAAACATGCAGTAAAAATCGAAGGTGAGAATCCGGAGAAAAGAGAATTTCCGTGCAAATATTGCTCATACAAAGCTATCAGTGGAAGtcatttgaaaattcatgaaaataaacacACCAAAGCAGTGGAATATAAATGTCAACAGTGCGATTTCAAAACAACGTGGTACGGTTATTTGAAACTTCATACTAAGAGAAAACACTCtgtcaaagaagaaaaatctggtTCTAAAACGTCTTACCCTTGCAATTATTGTCCATATAAAGCAATAAATCTAAGCACTCTAAAAGTTCATCAGAACAAACACACCAGAGAGGTTCTGTACAATTGCCCTCATTGCGAATTTAAGACAACTTGGGGCGCTTATATCAAGATGCATATTGAGAAACATAAcgtccaaaatttcaaaactagaaAGCAAGATTTAAAAGGAGTCAAATCTTTTCCTTGTGAATATTGCGATTATGTAGCTACACAAAATGGGTCATTGAAGCAGCATATAAATTCGAAACATACAAGAGAGACATTGCATAAATGCCCGAAATGTGATTATCAGTGTGCTGTTTatggaaatttaaaaatgcACATAAGACGCAGGCACGGATTGAAACCAGACCCTGATGGTAAATATAGATGTAAAGAATGTGAATTTATTTCTGATAATTCAAACGATTTCAAacttcatttgaatgaaaaacatgaCATCAAGCTCGATGTCGATGAAATTAAATTGGAAGATGATAAAGTGTATTCTTGCCATTTCTGTTCTTACCAAACACTATACCCGCAAGTAATGAAGAAACATGTTAATAAACATACCAGACAGAATGTAATTCAGTGTCCACATTGTCCATACAAAACTGTTTGGAATCATTATATGAAAGTTCATATTCGTCGGCACAATGAACCTAAATTAGGAAGGCAGAGGTTCACGAAACCTAACACTGATTTAAATAGATTGTTCCCATGCCAGTTTTGTGACCACAGAAGTTTATCGTTCAGCAGCTTAAAAGATCACATAAATTCTGTTCATACGCGTGAAGTACTTCATAGCTGCCCATATTGTGACCACAAATGCACATTAAAAGGTAATTTGAGGGGACATATTCGAAGAAAACATCCTGCAGAGTTTGTGGAGAACGAAAAGCGCTATTCTTGTGAGCACTGCGATTTTAAGACATCAATAATTAGAAACTTGAAAGTGCATCTGAAAAGAGAACATAACATCGATGATACTAAAGTAAAAGCAGAAAATGGCGAGTTTCAATGTCAATATTGTGAGTATAAAGCAAGAAGTTACTATGCTCTTaaaattcatacaaataaacatacaaaagaaaattcttatCATTGTCCTCAATGTGAATTCGTAACGAGATGGCCAAATTATCTCAGTAAACACATAAAACAACATAGTTTAAATAAAAGGAAGGTTACGTGTTTGTACTGTGATTACAAAGGCTGCTCAACGTTCAGACTGAGAAAACATGTAGAAAGTCTTCATAAAAAAGATCAGTATTACCCTTGCCCAAAACCGAAATGCGATTTTAAAACAATGCATTATCCGAGTTTGAGGATCCACTTAAAAGGCAGCATACATGCAGATTCcagaagaaaatctaatatgagtgtttcaagaaatttctcTTATAAATATGAACCTAATGAAGGCCGATATTTTGCTTGCGATCATTGTGATTATGCTTCGAAAACTCAAGGAAATCTAGATTTGCATATAAAAACAAACATGATAAGAGAGTTATATTAA
- Protein Sequence
- MTIIFRCNLPETDQGDFNQPGTSDMSTFADAREEQLYPCRYCEYVGNHPRLLSSHMNNRHTKSVVYQCPHCPYNSTISKSTRDHVDTKHCNEDDKPIDIKRKCQFCDYSASNATVLKNHMNKHTGEKQHQCSFCDFHTLWEGYLKMHIRRKHGDQTMDTGNPAKEYPCQYCDYKALTPSSLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIKNKHLKEKSPASKEFACNFCDYKAKNTTLLKQHENKHTREKVNQCPHCPFTTLWITYMKLHIKRKHAVKIEGENPEKREFPCKYCSYKAISGSHLKIHENKHTKAVEYKCQQCDFKTTWYGYLKLHTKRKHSVKEEKSGSKTSYPCNYCPYKAINLSTLKVHQNKHTREVLYNCPHCEFKTTWGAYIKMHIEKHNVQNFKTRKQDLKGVKSFPCEYCDYVATQNGSLKQHINSKHTRETLHKCPKCDYQCAVYGNLKMHIRRRHGLKPDPDGKYRCKECEFISDNSNDFKLHLNEKHDIKLDVDEIKLEDDKVYSCHFCSYQTLYPQVMKKHVNKHTRQNVIQCPHCPYKTVWNHYMKVHIRRHNEPKLGRQRFTKPNTDLNRLFPCQFCDHRSLSFSSLKDHINSVHTREVLHSCPYCDHKCTLKGNLRGHIRRKHPAEFVENEKRYSCEHCDFKTSIIRNLKVHLKREHNIDDTKVKAENGEFQCQYCEYKARSYYALKIHTNKHTKENSYHCPQCEFVTRWPNYLSKHIKQHSLNKRKVTCLYCDYKGCSTFRLRKHVESLHKKDQYYPCPKPKCDFKTMHYPSLRIHLKGSIHADSRRKSNMSVSRNFSYKYEPNEGRYFACDHCDYASKTQGNLDLHIKTNMIRELY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394848;
- 90% Identity
- iTF_00394848;
- 80% Identity
- iTF_00394848;