Cmon020940.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000083.1:7366281-7368034[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-06 0.00018 22.8 0.1 11 40 3 32 1 37 0.86
Sequence Information
- Coding Sequence
- ATGGCAGCTATAAAACGAGGGCATCTGACGCAACGAGCTGCAGCTGAACGATACAATATTCCAAGACGAACTCTCCGAAATCATATAAAGTCCGAAAGTACTATTAAGCGCTTAGGTCGTCGTTCCGTTTTGACAATTGACCAAGAAAAAGATCTTGTACAACGCATTATACGATTTTCTACCATTGGTGTACCTGTTACTCCGAAAGTCATACGGAGACAAGCATTTTTATTTTGCGAGAGTTATGATATTAAGCATGGTTTCAACAAAGACTCTGGAATTGCGGGCAAAGACTGGCTTAAAACGTTTTTTAAAAGGAAcccagaaatttccaaaagaaaagccCAGTTTATGAATCCAGGCAGAGCACAGAAATTAAACCGTCCTATTGTCGCTCAGCATTTCCAAGAAGTGAAagacctatatgaagaattagatattctacagaaccctcaacgactctataatatggatgaaaagGGGTGTAGACtcactattcatcatcaacaaactgTTTTGGCGCAAAAAGGAGCTCGTCGAGTCCATTTGATTGCACCTGAGCACGCGGAAAATGTTACGATAGCAATGTGTGTTAATGCTGTTGGTACTGCTATCCCACCAATGATCATCTTCAAAGGCCAAAGGCAAAAACCAGAATATAGTGATAACTTACCAGCTGGATCTCTCATAAAGATGGCTCCAAAAGGAAATGAAGCATTTGCACCAGCGATCTTGACCGAACATCCTCCTCCACAaacttcaactattattgaggcAAACATAGACTACCCTGAAGTAACGTCACGTTCTGACACTGTTTCACCGTCAATACTAAACAACGAAGAATGTACTATTGCTGGCATTGTTACCCCAGAAAAGCAAATTGGTGTAAGGGCTTTAACTGATATTGATACATCAACTCTTCCTGTGAAAGTACCACAAACTTTAACACCATCGCCTAAACCATCAACATCTGGTATTGTGACAAAACGTCCTCTTATTCTAAGTTCAGACTCAGAAACGGATATTGAGCCTGATGCTATACAgaagatgttgaatataaataatcccactagaatcaatgtatatacctccgaagaagactcagacaatgatactccgctagccagtcttaaaacaaaggaaactaaatccccgtttcaagaacttatgccaactccaaactatgctgttatcaaaaacaaaccaaGAAGAAGAAAGGCCATCAATTATAGAGGTCAACGGATTACTAGGGACCTTTTTAAGAAACGGGAGGagctaaaagaaaatgaggtaaTAAAGGTGAAAAAAGCCAATCGGAAAACTAAAGATCGTAAGAATAAGTCTGGAAAAGAGCATTAA
- Protein Sequence
- MAAIKRGHLTQRAAAERYNIPRRTLRNHIKSESTIKRLGRRSVLTIDQEKDLVQRIIRFSTIGVPVTPKVIRRQAFLFCESYDIKHGFNKDSGIAGKDWLKTFFKRNPEISKRKAQFMNPGRAQKLNRPIVAQHFQEVKDLYEELDILQNPQRLYNMDEKGCRLTIHHQQTVLAQKGARRVHLIAPEHAENVTIAMCVNAVGTAIPPMIIFKGQRQKPEYSDNLPAGSLIKMAPKGNEAFAPAILTEHPPPQTSTIIEANIDYPEVTSRSDTVSPSILNNEECTIAGIVTPEKQIGVRALTDIDTSTLPVKVPQTLTPSPKPSTSGIVTKRPLILSSDSETDIEPDAIQKMLNINNPTRINVYTSEEDSDNDTPLASLKTKETKSPFQELMPTPNYAVIKNKPRRRKAINYRGQRITRDLFKKREELKENEVIKVKKANRKTKDRKNKSGKEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394370; iTF_00394436; iTF_00394437; iTF_00394439; iTF_00394427; iTF_00394368; iTF_00394441; iTF_00394430;
- 90% Identity
- iTF_00394441;
- 80% Identity
- -