Cmon034951.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000144.1:32640858-32642403[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-09 8.5e-07 30.3 0.3 1 40 9 48 9 53 0.89
Sequence Information
- Coding Sequence
- atgcctccaaagagagctcagtggacagaaaacaatttacgggCTGCTATGGCAGCTATAAAACGAGGGCATCTGACGCAACGAGCTGCAGCTGAACGATACAATATTCCAAGACGAACTCTCCGAAATCATATAAAGTCCGAAAGTACTATTAAGCGCTTAGGTCGTCGTTCCGTTTTGACAATTGACCAAGAAAAAGATCTTGTACAACGCATTATACGATTTTCTAACATTGGTGTACCTGTTACTCCGAAAGTCATACGGAGACAAGCATTTTTATTTTGCGAGAGTTATGATATTAAGCATGATTTTAACAAAGACTCTGGAATTGCGGGCAAAGACTGGCTTAAaacgtttttgaaaaggaacccagaaatttccaaaagaaaagccCAGTTTATGAATCCAGGCAGAGCACAGAAATTAAACCGTCCTATTGTCGCTCAGCATTTCCAAGAAGTGAAagacctatatgaagaattagatattctacagaaccctcaacgactctataatatggatgaaaagGGGTGTAGACtcactattcatcatcaacaaactgTTTTGGCGCAAAAAGGAGCTCGTCGAGTCCATTTGATTGCACCTGAGCACGCGGAAAATGTTACGATAGCAATGTGTGTTAATGCTGTTGGTACTGCTATCCCACCAATGATCATCTTCAAAGGCCAAAGGCAAAAACCAGAATATAGTGATAACTTACCAGCTGGATCTCTCATAAAGATGGCTCCAAAAGGAAATGAAGCATTTGCACCAGCGATCTTGACCGAACATCCTCCTCCACAaacttcaactattattgaggcAAACATAGACTACCCTGAAGTAACGTCACGTTCTGACACTGTTTCACCGTCAATACTAAACAACGAAGAATGTACTATTGCTGGCATTGTTACCCCAGAAAAGCAAATTGGTGTAAGGGCTTTAACTGATATTGATACATCAACTCTTCCTGTGAAAGTACCACAAACTTTAACACCATCGCCTAAACCATCAACATCTGGTATTGTGACAAAACGTCCTCTTATTCTAAGTTCAGACTCAGAAACGGATATTGAGCCTGATGCTATACAgaagatgttgaatataaataatcccaCTAGAATCAATGTATATACCTCCGAAGAAGACTAA
- Protein Sequence
- MPPKRAQWTENNLRAAMAAIKRGHLTQRAAAERYNIPRRTLRNHIKSESTIKRLGRRSVLTIDQEKDLVQRIIRFSNIGVPVTPKVIRRQAFLFCESYDIKHDFNKDSGIAGKDWLKTFLKRNPEISKRKAQFMNPGRAQKLNRPIVAQHFQEVKDLYEELDILQNPQRLYNMDEKGCRLTIHHQQTVLAQKGARRVHLIAPEHAENVTIAMCVNAVGTAIPPMIIFKGQRQKPEYSDNLPAGSLIKMAPKGNEAFAPAILTEHPPPQTSTIIEANIDYPEVTSRSDTVSPSILNNEECTIAGIVTPEKQIGVRALTDIDTSTLPVKVPQTLTPSPKPSTSGIVTKRPLILSSDSETDIEPDAIQKMLNINNPTRINVYTSEED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394423;
- 90% Identity
- iTF_00394441;
- 80% Identity
- iTF_00394437;