Cmon049038.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000185.1:86279406-86279942[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-07 7.4e-05 24.1 0.0 3 41 17 55 15 59 0.85
Sequence Information
- Coding Sequence
- ATGCCAAAAGTACGAGTAGAGCCAACCGAAAAAGCCAATTGGTCATCCGAGTCTCTCCAAAAAGCCATACTTCTTATTGAACAAGAGGGTTATTCTATAAGAAAAGCTAGTAAATCTACTGGTATCCCATTTTCGAGCTTACAGAAAAGATTCAAAAAGAAGACTTTCCAAGAACCACGTCTTGGAAGATGTACAGTATTTACGCCtgaagtagaagaaaaattatctGATGTGATAAAAAAGATggataatatattttatggttGTACCGCAACTCAAATAAGGAAAGTGGCATTTGATTATGCGGAAAGTATGAATTtaaatcataactttaatgaagTTACAAAAATGGCTGGTCGAGATTGGTTGAAAGCTTTTATAGctagaaataatatatctgtGAGGAAATCAGAGGCAACCAGCATGAATCGAATAACAGCGTTCAATAAAGAGGAGGTGCAGTTATTCTTTAAGCTGTTATGGAGAAACACAAATTtcttcccaaaaatatatacaattgcGACGGAACCGGAATGA
- Protein Sequence
- MPKVRVEPTEKANWSSESLQKAILLIEQEGYSIRKASKSTGIPFSSLQKRFKKKTFQEPRLGRCTVFTPEVEEKLSDVIKKMDNIFYGCTATQIRKVAFDYAESMNLNHNFNEVTKMAGRDWLKAFIARNNISVRKSEATSMNRITAFNKEEVQLFFKLLWRNTNFFPKIYTIATEPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394415; iTF_00394419; iTF_00394407; iTF_00394408;
- 90% Identity
- iTF_00394408;
- 80% Identity
- -