Cmon052193.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000185.1:143283759-143284352[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-07 5.7e-05 24.4 0.0 3 40 17 54 15 57 0.90
Sequence Information
- Coding Sequence
- ATGCCAAAAGTACGAGTAAGGACAACCGAAAAAGCCAATTGGTCATCCGAGTCTCTCCAAAAAGCCATACTTCTTATTAAACAAGAGGGTTTTTCTATAAGAAAAGCTAGTAAATCTACTGGTATCCCATTTTCGAGCTTacaaaaaagattcaaaacgAAGACTATCCAAGAACCACGTCTTGGAGGATGTACAGTATTTACGCCTGAAGTAGAAGAAAAATCAGCTGATGTGATAAAAAAGATGGCTAATATATTTTATGGTGGTACCGCAACTCAAATAAGGAAAGTGGCATTTGATTATGCGGAAAGTATGAATTTaaatcataactttaataaAGTTCCAAAAATGGCTGATCGAGATTGGTTGAAAGCTTTTATGGctagaaataatatatctgtGAGGAAACCAGAGACAACCAGCATAAATCGAATAACAGCGTTCAATAAAGAGGAGTTGCAGTTATTTTTTAAGCTGAAgttggaggaaattatggagaaacacaaatttcttcccaaaaatatatacGATTGCGACGAAACCGGAATGATAACTGTACAGAATCCAGGGAAAATACTAGCAACAAGAGGTTAG
- Protein Sequence
- MPKVRVRTTEKANWSSESLQKAILLIKQEGFSIRKASKSTGIPFSSLQKRFKTKTIQEPRLGGCTVFTPEVEEKSADVIKKMANIFYGGTATQIRKVAFDYAESMNLNHNFNKVPKMADRDWLKAFMARNNISVRKPETTSINRITAFNKEELQLFFKLKLEEIMEKHKFLPKNIYDCDETGMITVQNPGKILATRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394409;
- 90% Identity
- -
- 80% Identity
- -