Cmon021953.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000083.1:25679541-25705058[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-10 2.9e-08 35.0 0.0 1 39 288 327 288 331 0.90 2 4 4.3e-11 7.1e-09 36.9 0.1 1 39 342 380 342 383 0.95 3 4 7.8e-18 1.3e-15 58.5 0.0 1 45 397 442 397 442 0.98 4 4 2.2e-15 3.7e-13 50.6 0.0 1 39 449 488 449 492 0.94
Sequence Information
- Coding Sequence
- ATGTGGCACAGTGCTACATTCACTGCTATTGCGAAAGTTGCACTAGCTAGGATTCAGAAGAACGGTGTTCAGTCCCTTctaagaactgcagatcaactgaaaatcaaAGGTTTATGCGAATCTTCCGGTGAAAAAGGAGAACATTCGAGCATTCTGCAAATCCAGTCATCGGACATAGCGAGAATACGTAAAGCTTCCCCACTGAAACACGAGCAAGCCTTCGATGATCagaggaaattgaaattgaggaAATTGAATTCACCCAAAGTAGAGCATTTCGAAGTTCCGGGTACCGCTTCAGACGATGGAGAAAATGATGATATGCCAGTAAATTTAGATGATCATTCTAACAAGAGGGTGGAACCCGAACAAACTAAACCGTTGAACATGAGTAGCCATGGTTTACTTGCTGGCCAAACCATCTTCTCCCAGTTCGGAGTCGATACAGACGACTTTCCGCCCGAACCTCCGGCACCGTCTGCGATCCCAGTTGGCCATGTGGACATGGATCATTCGCCTACAAGAACTTTGCTCAATAGTAGTTCCATCCACAGAACTGATATATCCGATTCCaaatatgaaataaagaaaGAAGCTATAGATATCAAATTTGAGACGTTGCGATCATATGATCAGGATTCATTGTTAGAAATGGATTCGCACAATTCACGTTTATCCGGAGCAGATCTTTCGAGAGATAGTCACGATGATCCAGAGCAGTCATTGCATTCTATGATGGtcacgccagaactcatgggaATGCTGCCAGGTGGTTCAAATAGATCAGAAATGAATGGATGTAGCGATTTTTCAGTGGGCAAAGATGCTTCAAGAAATCATATAGGTGGACCAAAGACATGGACCCAAGAAGATATGGATATGGCCTTAGATGCTTTAAGAAATCACAATATGAGCCTTACTAAGGCTTCAGCTACCTATGGAATTCCCTCCACTACGCTTTGGCAAAGAGCTCATAGATTAGGAATAGACACGCCAAAAAAAGAGGGTCCTACAAAATCCTGGACCGAAGAGAATTTAAATAGTGCTTTAGATGCTTTAAGGACTGGCACAATATCAGCAAATAAAGCAAGCAAAGCTTTCGGCATTCCGAGTAGTACATTGTATAAAATAGCAAGACGAGAAGGAATTAGATTGGCGGCACCCTTCAATGCTGCACCAACAACATGGACACCAGAGGATTTAGAAAAAGCTTTAGAATCGATACGATCTGGTCAAACTTCTGTTCAAAAGGCATCAACTGAATTCGGTATTCCGACAGGTACCCTTTATGGACGATGTAAAAGAGAAGGAATAGAACTATCCAGGTCGAACCCAACACCTTGGTCGGAAGACGCGATGGGCGAAGCTTTGGAAGCAGTTAGGCTCGGACATATGTCTATCAATCAGGCAGCTATTCACTACAATCTTCCTTACTCTTCGCTTTATGGTAGGTTCAAGAGAGGCATCAAATATGATTCAGACAATTTGGAAGGCAACTCGGACAGCAATTCGCATCTAGAAGTTGCTTTTGGCATGGATTATGCTAATACTCATCCTCAAcaaattcaatatcaaaaccaAACGAACAGCTGA
- Protein Sequence
- MWHSATFTAIAKVALARIQKNGVQSLLRTADQLKIKGLCESSGEKGEHSSILQIQSSDIARIRKASPLKHEQAFDDQRKLKLRKLNSPKVEHFEVPGTASDDGENDDMPVNLDDHSNKRVEPEQTKPLNMSSHGLLAGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMDHSPTRTLLNSSSIHRTDISDSKYEIKKEAIDIKFETLRSYDQDSLLEMDSHNSRLSGADLSRDSHDDPEQSLHSMMVTPELMGMLPGGSNRSEMNGCSDFSVGKDASRNHIGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNLEGNSDSNSHLEVAFGMDYANTHPQQIQYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415795;
- 90% Identity
- -
- 80% Identity
- -