Basic Information

Insect: Cryptolaemus montrouzieri
Gene Symbol: Unr
Assembly: GCA_013387265.2
Location: JABFTP020000083.1:53796572-53803458[+]

Transcription Factor Domain

TF Family: CSD
Domain: CSD domain
PFAM: PF00313
TF Group: Beta-Scaffold Factors
Description: In molecular biology, the cold-shock domain (CSD) is a protein domain of about 70 amino acids which has been found in prokaryotic and eukaryotic DNA-binding proteins. When Escherichia coli is exposed to a temperature drop from 37 to 10 degrees Celsius, a 4–5 hour lag phase occurs, after which growth is resumed at a reduced rate.During the lag phase, the expression of around 13 proteins, which contain cold shock domains is increased 2–10 fold. These so-called 'cold shock' proteins are thought to help the cell to survive in temperatures lower than optimum growth temperature, by contrast with heat shock proteins, which help the cell to survive in temperatures greater than the optimum, possibly by condensation of the chromosome and organisation of the prokaryotic nucleoid.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.5e-16 8.3e-12 46.5 0.0 2 65 137 199 136 200 0.95

2 9 9.3e-05 1.4 10.5 0.0 17 63 232 279 227 281 0.74

3 9 5.5e-18 8.3e-14 52.9 0.2 2 65 291 350 290 351 0.96

4 9 0.05 7.5e+02 1.8 0.0 40 63 415 440 405 443 0.78

5 9 4.2e-12 6.3e-08 34.1 0.4 2 55 456 506 455 519 0.92

6 9 0.14 2.1e+03 0.4 0.0 43 63 599 621 571 624 0.76

7 9 1.7e-16 2.6e-12 48.1 0.5 2 64 646 708 645 710 0.86

8 9 1 1.5e+04 -2.4 0.0 39 54 773 788 769 795 0.75

9 9 4.6e-11 6.9e-07 30.7 0.2 13 65 811 864 802 865 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.5e-16	8.3e-12	46.5	0.0	2	65	137	199	136	200	0.95
2	9	9.3e-05	1.4	10.5	0.0	17	63	232	279	227	281	0.74
3	9	5.5e-18	8.3e-14	52.9	0.2	2	65	291	350	290	351	0.96
4	9	0.05	7.5e+02	1.8	0.0	40	63	415	440	405	443	0.78
5	9	4.2e-12	6.3e-08	34.1	0.4	2	55	456	506	455	519	0.92
6	9	0.14	2.1e+03	0.4	0.0	43	63	599	621	571	624	0.76
7	9	1.7e-16	2.6e-12	48.1	0.5	2	64	646	708	645	710	0.86
8	9	1	1.5e+04	-2.4	0.0	39	54	773	788	769	795	0.75
9	9	4.6e-11	6.9e-07	30.7	0.2	13	65	811	864	802	865	0.87

Sequence Information

Coding Sequence: ATGTCCGGCAATCCTCAGTGGAAGACCTTCCAGCCGCCCGACACCATGAATCAGGACTCTGCCATTATGGACTTGAAATCCATGGGGAACACTGGTAAATCATCGCAAGTATTCAATTTCAACCGTTCAACGTCGTCGTCGCGGTTCGGACAGGACTTTCCTCTGCTGCAGGACAAGCAGCCCTCATCCTCGGGAGCTCCCTACTCCAACAACGGTATCTACGGCTCGTCCAGCGCCACACAGGCGGGAGGCGCGGGTCGTTTTTCCATTGGTACCTTCTCGTTAGACTCGAACAGCGTCTTCAACAGCTCCGGAGACAACAACACAAACATATTCTCGACCTCTCAGTCCAACGGCAACAATTCCAGCTACAGCGATTCCAACTCCACTAATCTTGGTACTCGGGAGACTGGTATAATCGAGAAATTACTGCACTCGTACGGATTCATCCAGTGCTGCGAGCGGCAGGCTCGTCTCTTCTTCCACTTCTCGCAGTTCAGCGGGAATCGCGACCACCTGAAGATCGGCGATCCTGTCGAGTTCGAGATGACTTACGACCGACGCACCGGCAAACCGATCGCTAGCGCCGTCACCAAGATCGCGCCCGAGGTGGTGATGAGCGAGGAACGCGTCACCGGCACCGTGACGACCGAGGTGAGGGGCGAGGGATCGGCGGGCGACACCACCGGTCGCATTAGTTACGAGAACCGCGGCGAGTGTTTCTTCCTGCCGTACACCAAGGACGACGTCGAGGGCAACGTCACGTTGAGCGCTGGGGACAAGGTCAGCTTCCAGATAGCCACCAACAATAGGGGTAACTTGGGGGCATGCCACGTGCGCTTGGAGAACGCCGCGCACCCCGTCAAGTACCAGGGCGTGGTGTGTTCCATGAAGGAAAGCTTCGGCTTCATAGAGCGCGCCGACATAGTCAAGGAGATCTTCTTTCACTTCTCCGAAGCCAAAACCAAAGAAGAATTAAGACTTGGGGACGACGTAGAGTTCATCATTCAGACTCGTAACGGCAAAGAAGTTGCGTGTAACATAATTCGATTGCCGCCCGGCACCGTGATATTCGAAGATCTGAAGCCCGAGGTGATCAAAGGTCAGGTATTGAAGCCGCTGGATAGGGGACCGAACGCTCGGCACCAATCCGATCCTCTGCCGGGCAGGATCAGGTATAGGGCTCCGGACCACTCCGAAgTGGAAATTTCGTTTGGAGACAAAGACCAAAAGGGCGACTTTACCTTGCGCCACGGCGATTGGGTACAGTTCCGAATCGCCACAGACAGACGGGATGGTTTAAATCGTGCCACACACATCTCCCTCCTCGACGAGAGCTTCCTGGTGTCGGGCGAGAAGCGCGAGCAGGGCGTCGTCGTCAGCCTGAAGGAGGGCTTCGGTTTTCTGCGTTGCGTGGATCGCGAGCCCAGACTCTTCTTCCACTTCAACGAGATCCTAGACTCGGAACGCGAGATTCAGGCCGGCGACGAGTTCGAGTTCACCGTGATCCAAGACCAGAGCAGCACCTTCTCAAACAACAGACAGAGCGCGATCCGCATGAAGTACCTGCCGCCGGGCACGGTGCAGTTCGAGACTTGCGTGGATTGCGACGTCCTTGGCATCGTCTGCAAGGAGATACCGCCGATCAATTGGGCGACGCGGAGTCCCACCAAGAATGGCGTGGGTAACGGCGAACACCAGCCCGATACGGGCCTGATAACGTACCAGTTGAACGGGCAGAAGAAGAACATCGCGTTTTATTCCAAAGACATCGATTTGAAGCATTATCCGAGGCTGGGGGACAAGATAAAATTCAACATAAACCAGGTGAAGAGGAACAAGGAACTCATCGCCACGGACATAGAGATCGTTCAGTCGTCCACGCAGACCAACGGCATCAAAGTGAGCCGGAGTTCCAGCAACAACCAGATCTATCAGGGCTTCATAGCGGCGCTCAAGGACGGTTTCGGCTTCATCGAGACCGTGCAACACGACAAGGAAGTCTTCTTCCACTTCAGTAACTTTGACGGAGATTCGAACAGTCTGGAACTGGGTCAGGAGGTGGAATACAACCTGGCCAGCCGCAGCAATTCGGGGACGTGCTCGTCGGCGGAGAACGTGCGTGTGGTGCCCAAGGGAACCATCGCCCTACCCCAGGTCAACGAAGAAATCTTGGACGGCGTGGTGGTTCGACCGCTGCGATCCGTCAATCCTGACCAGACAGATTATCCGGGACTGATACAGATTACGGGGGAGAGTCCGGACGACGAGCCCGTCGAATACGAATTCGGCATAATGGGTCTAACGAACAAGAGGGAATTACTGCAGGTGGGCGATCACGTGCAGCTGCAGGTGGACAAGACGGGACGCGCTGCGAACATCGAGGCGCTGAGGAAGAAGCTGAGAGCACCCGTGGACGCCATCAAGGGTCACTTCGGCTTCCTGGCCTATGAGGTGGAAGAAGGCAAGAAATTGTATTTTCACATGACCGAAGTACGAGATGGCGTCACGCTCCAGGTGGGCGACACCGTCGAGTTCGTGCTGGTTACCAATCACAGGACAGGAAAATCGTCGGCTTGCAACGTTGTCAAAGTCAGCGACGTACAGGCGAGACCCGAACGACTAATCAGCCGACTGCGCACGATATCATTGGACGACGCGGGGCCCAAACTGACGGTCCTGCGACTCACGAAGGGCCCGGACGGTACTCGCGGCTTCGCCCTCGACTCCCGGACGAAACGGGCGCCAGGCTCGACGCCCGAATAA
Protein Sequence: MSGNPQWKTFQPPDTMNQDSAIMDLKSMGNTGKSSQVFNFNRSTSSSRFGQDFPLLQDKQPSSSGAPYSNNGIYGSSSATQAGGAGRFSIGTFSLDSNSVFNSSGDNNTNIFSTSQSNGNNSSYSDSNSTNLGTRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNRDHLKIGDPVEFEMTYDRRTGKPIASAVTKIAPEVVMSEERVTGTVTTEVRGEGSAGDTTGRISYENRGECFFLPYTKDDVEGNVTLSAGDKVSFQIATNNRGNLGACHVRLENAAHPVKYQGVVCSMKESFGFIERADIVKEIFFHFSEAKTKEELRLGDDVEFIIQTRNGKEVACNIIRLPPGTVIFEDLKPEVIKGQVLKPLDRGPNARHQSDPLPGRIRYRAPDHSEVEISFGDKDQKGDFTLRHGDWVQFRIATDRRDGLNRATHISLLDESFLVSGEKREQGVVVSLKEGFGFLRCVDREPRLFFHFNEILDSEREIQAGDEFEFTVIQDQSSTFSNNRQSAIRMKYLPPGTVQFETCVDCDVLGIVCKEIPPINWATRSPTKNGVGNGEHQPDTGLITYQLNGQKKNIAFYSKDIDLKHYPRLGDKIKFNINQVKRNKELIATDIEIVQSSTQTNGIKVSRSSSNNQIYQGFIAALKDGFGFIETVQHDKEVFFHFSNFDGDSNSLELGQEVEYNLASRSNSGTCSSAENVRVVPKGTIALPQVNEEILDGVVVRPLRSVNPDQTDYPGLIQITGESPDDEPVEYEFGIMGLTNKRELLQVGDHVQLQVDKTGRAANIEALRKKLRAPVDAIKGHFGFLAYEVEEGKKLYFHMTEVRDGVTLQVGDTVEFVLVTNHRTGKSSACNVVKVSDVQARPERLISRLRTISLDDAGPKLTVLRLTKGPDGTRGFALDSRTKRAPGSTPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01409715;
90% Identity: -
80% Identity: -