Basic Information

Insect: Cryptocheilus praepositus
Gene Symbol: -
Assembly: GCA_033815515.1
Location: JAWWQZ010000001.1:11657278-11661738[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3.4 5.6e+03 -2.4 0.3 33 45 178 191 176 191 0.66

2 5 5.3e-07 0.00089 19.4 0.0 2 38 195 231 194 237 0.84

3 5 6.7e-11 1.1e-07 31.9 0.0 5 39 248 281 245 288 0.85

4 5 0.1 1.7e+02 2.4 0.0 21 34 315 328 300 333 0.74

5 5 1.7e-11 2.8e-08 33.8 0.1 4 39 359 394 356 399 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3.4	5.6e+03	-2.4	0.3	33	45	178	191	176	191	0.66
2	5	5.3e-07	0.00089	19.4	0.0	2	38	195	231	194	237	0.84
3	5	6.7e-11	1.1e-07	31.9	0.0	5	39	248	281	245	288	0.85
4	5	0.1	1.7e+02	2.4	0.0	21	34	315	328	300	333	0.74
5	5	1.7e-11	2.8e-08	33.8	0.1	4	39	359	394	356	399	0.93

Sequence Information

Coding Sequence: ATGTCTGAAGTTGCTGGCCAGCATGAGTTCGCTCAGAGCTACTGTTTCAAATGGAACGACTATCAGAATCATTTGTCCGATGTTGTGCGACAGCTTCTCGAGGAAGACTGCATGGTGGACGTGACGCTTTCCGTTGCTGGCGAGCGCATTCATGCACACCGTATCGTTTTGTGCGCTTGCAGTACTTTATTCCAAGAGGTACTTAGTGAAGTAAATGAGGATCATCCGACAATAATATTGAGTGATATATCCCCGCAAGATGTGAAGTCAATAATCGAATTTACATATCAAGGAGAAGTCCGGATACCTGTAGAAAATATCAGTAGTTTGTTAGATGCGGCTAGATCTTTAAGGATATGTGGTCTTATTGAGATTGATGGCCTAGATGAGAGTGAGTCTTGTACAAATTCAAAGGAATTCAGTGAGGCCAACGAGGAACCTATAGTTGAAGTGAACGAGCCCGATGGGAAATTCGACGAAAGCTACCAAGACACGCCGACCGAATCCGAACAAAGCTCTGAATCCTCGCCTTTGAGCAAGAGAAAAAAACGCAGGCGCGAAACGGCAAAAAGAGACTATAGCGATGACATGCTTGCATCAGCAATTAATGATCTACGATCGGGGCAAACGCTGATAGAAACTGCCACCAAACACAACATACCCCGATCGACTTTATACATGAGGGCCAAGGCTCTGGGGATACACTTGAATGCATCCAGAAACGAGTATCCGGCAGAATGTATGAAGAGTGCTATTGATGCAGTCGTCAACGGATCAAGTTTGCAACACGCGTCAGAAATGTTTAGCATCCCAAAGACAGTGCTGTGGAGAAGAATACAGAAGGAAGGATATCAAATTTTGCGTTCAGAAATGAAGAGATCATATTGTTCGGATAAGAGAGCTGCCGCGGTGCAAGCTTTAGAGAGGGGCGAAAATCTGACAAAAGTTGCCCTAGAATTTAAAATACCAAAGACGACGTTGTTTAGAGACAAAGCTCGATTAGTCGATGAAGGGAAACTGCCGCTGTCCTTTTGGAAGAAACGGAAGACTGAAAACGAGGAGTTGAAGAAGTCTCGACTGGAGGAGGCCGTTGCTGCATGTAAGGGTGGGAAAATGTCCCAGGCAGCGGCATCGATGACTTACCACATACCAAAGACTACAATATGGAGGCGACTTCAGCAGGATAGCAAAAAGTCTGACAACCGTGCGTTGACCACGAAGCGACAGAAGCAACCAGTTACAGATTCTACGCAAAATCCTGAACAGAAGCAAGACGGTTCAGATTTTACGTACTGCGAGGTGCCGCCAGAAATACCCATAACGTACATAGACGAAAATAGTATACCGGAGGATTCCGTAATAATATTGACGACCGACGACATGGAAGGTCTTAATTTGGAAGAGGGGAGGCAGATAATTGTAAATTCGGAATCCGGACAGGAATATGTTCCGTGTACTATAAGCATCGaggaaaattcaaattattcacaGACGGATAGTTAG
Protein Sequence: MSEVAGQHEFAQSYCFKWNDYQNHLSDVVRQLLEEDCMVDVTLSVAGERIHAHRIVLCACSTLFQEVLSEVNEDHPTIILSDISPQDVKSIIEFTYQGEVRIPVENISSLLDAARSLRICGLIEIDGLDESESCTNSKEFSEANEEPIVEVNEPDGKFDESYQDTPTESEQSSESSPLSKRKKRRRETAKRDYSDDMLASAINDLRSGQTLIETATKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKSAIDAVVNGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYCSDKRAAAVQALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDSKKSDNRALTTKRQKQPVTDSTQNPEQKQDGSDFTYCEVPPEIPITYIDENSIPEDSVIILTTDDMEGLNLEEGRQIIVNSESGQEYVPCTISIEENSNYSQTDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118108;
90% Identity: iTF_01255799;
80% Identity: iTF_00393697;