Cpra016943.2
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- Rel
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000285.1:2292798-2298745[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-39 9.4e-36 123.8 0.2 1 168 82 276 82 277 0.89 2 2 2.2 1.3e+04 -3.6 0.1 93 122 713 742 692 758 0.51
Sequence Information
- Coding Sequence
- ATGCCTGATGAGTATACAGATGCGATTCTAAATGTTTTCCTTGGACCTCAGGAAACTTATTATCCTAATGgatacgAGTACAACCAATGTTCAATGAACAATCCTATAAGTCCATACATGAGTTgttccgactcaatgggaaacAGCACAAGTGCTTCGTCACCTATGTCAAGCACTTTATCACCTGTACACCCAACCACCTATGTAACGTTAAATGATGCCATagATCTTGGGCAaccaaatatttccataatcgaACAGCCAGTGGAAAAATTCAGATTCAGATATAAATCTGAAATGATGGGAACTCACGGAAGCTTGGTTGGTGCTAGTAGCGCTTCTACCAGAAAAAAACATGCTCCAACAGTTCAGCTTAATTTTCCTGACACCATGATTGCACCTCAGAAGATTGTAATAAGATGTACACTAGTAACAGCTGACGATGATGAAAAAATACCACACGCTCATAGATTAGTACGAAGAGATGGACTTATCGATCATGATGACCCTCATGAAGTTGACGTAACTCCTGAGAACGGTTTTATTGCATCATTTTATGGAATGGGTATTGTACACACTGCGAAGAAATATATCAAGGATGAACTTGTACGGAAATTGAAGATGCTGGAACTGGAAAAGCTTAAGAGAAAGAATGTGAATGCAGAACTTAGTGTTAGAGAAATTGCACAGATCAAAGCAAATGCAGAACGCTACCAAAAGACAATGAACCTCAATAGTGTAGCTCTTTGTTTCCAAGCATTTACCCCAAATGAGCATTCTGTTATGATTCCCATCACACCACCTGTGTACTCCCATCGCATTAATAATCTTAAAAGTACGCTGACAGGAGAACTCAAAATATGTCGAATTGACAAGACAACAAGTACTTGCGAAGGTGGGGAAGAAGTCTTCATACTAGTGGAAAAGGTTGGGAAAAAAAATATAAGAGTGAAGTTCTTTGAATTAAACGAGGATAACTATGAAATTTGGGTTGACTACGGGCGTTTTTCCGAACTGGATGTGCATCATCAGTATGCAATTGTATTTCGTACACCGCCTTACAAAGATCTAAATATTACTTCTGCGAAAGAAGTTTTCATACAGTTGGAAAGACGATCTGATGGGGTGTGTTCAGATCCGAAGAAATTCACTTACAAGCCAACAGACAGGAACATGGGTAGAAAACGAGCTCGAATGTCCCATTCGAACAGCGCAGAATTGGCTCGGATGATGATTTGcaatacaccaccattagaggAGTCTAGTGTCACGTTTAACAATGATAGcaatgaattgaaaaaaatgttggctgATCGCTGTTCATCATcagaatttgcaaaatttgtgttggaGTTTGATTATGACAAATATATACAGAGCTGCTATAAAAGTGAAGAACACGTACTAACTTGTGATGGTCCAGCGGCTAAACGTgaTAGAGATGATGCAATGTTTGCAAGGAATGTGATATTGGAAgcagtaaatataataaagctAGACTCACCAGATAGCAAGGAAAGATTGCAAAAGCTACTTAAAGATCGTTCTACTTATGGGGATTCACCGCTTCATGCGGCTCTACGACACAGTCAGTGGGAAATTGCGAAGTACCTTCTAATACTGATATCTACTGACCAAGcttttaaacaatttgtaaatattcaaaacagCTCTGGCAAGGCACCGCTACACTATGCTGTTTTGCAAAATCAATCggaacttgcaaaagcattgttGATGCTTGGAGCAGACCCTAATATGTGCGACGATCATGGCTCTTCTCCATTGCATGTTGCTGTGAGATTTCCACATGCGGGCGATTGCGTGGATGCTCTGTTATCCGACAAGAGAACAAATATAGAAGCATACAATGACGTAGGATGGACGCCATTGCAACTTGCTGCTGAAGCAGGTTCATATGACGCCATACGATCACTTGTCAAGGCTGGTGCAGACGTGAATAGCGCTGACAAATCTTATGGTCGAACGGCGCTACACATAGCAGTTGAAGGCGGACACATCGATATTGTCGAATTCTTATTAAACGAGACAAACATTGACGTGAATACAAGAAACTTTAGTGGAAATACAGCTCTTCATAGCGCGGTAGTCAATCCTGGCACACGAGCGAAAGAATTATGCAAACTTCTAATAAAACATCAAGCTAATCCATACATAGCGAACCATAATCGAGAATCGAGTAGTACAGAGAAGAAGAAGGTGCAAAACGTTGACATTAAGGTAGAGGTAAATTCGGATGACGAAAATGCGGAGGAAAGTGGGGAGACGTCATTTGACTTAGCTTCCAACAAACCAGAGATTTTGCAGCTTCTTACCGGAGACGTGTCGGAACCCCgaaatgatattgaaatgaaacCTGTCCCAACAAAGCAGGAAACGATAGACACCGAATCGGAAGACACAATTCTCGATAACAAACAAAAACGACACTTATCTATGCTCTTAGATAAATCGCACACTTGGGAAAAGTTGGCTGAGCGCTTGAACGTTGGATACCTTGTACATACATTCCGTGAAGATTTATCAAGCCCATCGATGTTCCTTTTGAATTATCTCGAGgcTCAAGACATTTCCCTCAGCGACATGCAACAAGCACTTCAAGACATTGGTGCAAATGAGGCGGCCACCTATGTTGAAAACATTCGTTTGACGCATCAGTAA
- Protein Sequence
- MPDEYTDAILNVFLGPQETYYPNGYEYNQCSMNNPISPYMSCSDSMGNSTSASSPMSSTLSPVHPTTYVTLNDAIDLGQPNISIIEQPVEKFRFRYKSEMMGTHGSLVGASSASTRKKHAPTVQLNFPDTMIAPQKIVIRCTLVTADDDEKIPHAHRLVRRDGLIDHDDPHEVDVTPENGFIASFYGMGIVHTAKKYIKDELVRKLKMLELEKLKRKNVNAELSVREIAQIKANAERYQKTMNLNSVALCFQAFTPNEHSVMIPITPPVYSHRINNLKSTLTGELKICRIDKTTSTCEGGEEVFILVEKVGKKNIRVKFFELNEDNYEIWVDYGRFSELDVHHQYAIVFRTPPYKDLNITSAKEVFIQLERRSDGVCSDPKKFTYKPTDRNMGRKRARMSHSNSAELARMMICNTPPLEESSVTFNNDSNELKKMLADRCSSSEFAKFVLEFDYDKYIQSCYKSEEHVLTCDGPAAKRDRDDAMFARNVILEAVNIIKLDSPDSKERLQKLLKDRSTYGDSPLHAALRHSQWEIAKYLLILISTDQAFKQFVNIQNSSGKAPLHYAVLQNQSELAKALLMLGADPNMCDDHGSSPLHVAVRFPHAGDCVDALLSDKRTNIEAYNDVGWTPLQLAAEAGSYDAIRSLVKAGADVNSADKSYGRTALHIAVEGGHIDIVEFLLNETNIDVNTRNFSGNTALHSAVVNPGTRAKELCKLLIKHQANPYIANHNRESSSTEKKKVQNVDIKVEVNSDDENAEESGETSFDLASNKPEILQLLTGDVSEPRNDIEMKPVPTKQETIDTESEDTILDNKQKRHLSMLLDKSHTWEKLAERLNVGYLVHTFREDLSSPSMFLLNYLEAQDISLSDMQQALQDIGANEAATYVENIRLTHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01255312;
- 90% Identity
- -
- 80% Identity
- -