Cpri018665.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- -
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:4859616-4861219[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.3e+03 -0.3 0.1 2 26 24 53 23 55 0.82 2 14 0.0003 0.28 11.4 0.9 18 39 114 132 111 136 0.82 3 14 0.014 13 6.1 0.2 6 40 131 161 130 164 0.80 4 14 0.44 4.1e+02 1.3 4.6 6 40 159 189 155 192 0.75 5 14 0.0021 2 8.7 0.6 18 41 198 218 189 219 0.89 6 14 0.045 42 4.5 0.4 13 39 249 272 238 276 0.79 7 14 0.0025 2.3 8.5 1.3 5 39 270 300 266 312 0.74 8 14 0.068 63 3.9 0.1 16 39 308 328 301 332 0.82 9 14 0.008 7.4 6.9 0.1 17 41 337 358 330 360 0.85 10 14 0.99 9.2e+02 0.2 9.0 2 38 351 383 351 387 0.81 11 14 0.0011 1.1 9.6 0.3 2 39 379 412 378 416 0.85 12 14 0.0065 6 7.2 4.8 16 40 420 441 411 444 0.85 13 14 0.14 1.3e+02 2.8 0.1 17 40 449 469 441 472 0.84 14 14 0.018 17 5.7 1.3 3 39 464 496 462 500 0.84
Sequence Information
- Coding Sequence
- ATGGGGGGTGCTGAGGCGAGCACTTGCGACTGGTGCCTGCGGGAGACGCCGGTAGAAACGATCCAGGAGGAATTATGGCGGTTCTGGAAGATAATCAGCGCGGAGGTTCCCCTCCTGGAGTCCCGTAGGAACATCTGCGAGTCCTGTAAATCGCGGTACGAGGAATTCATGACGTACGTCGAGACGTGCAAAACCCACGCCTCCTTAGTCGAGAAGGCGCTGCTGCCCCCTGGACGAGTCGGGGACGGACCTTCGAACGATCACCTGTACCGCCCGTCGGTCAAGGAAGAGGTCCTGACGGGAGACGAGTCCGGTACGGCCTTCCCTCCGTCGCCCTTTAAATGTTCGTACTGCGGTAAGGCCTACGTACGGTCTAGTAGCTTGACGAAGCACGTGCGACTTCACACGGGCGAGCCGGCGCTCAAGTGTCCCGTCTGCGACAAGGCCTTCACCCAGTCGGGTAATTTGAAACGACACGTGCGCCTCCATGCCGTCGAGGCGCCTCTCAGGTGCTCCGTCTGCGGTAAGACTTGCGCTCGGTTCGGCCGTCTGATGACGCACATGCGCGTCCACACGGGCGAACGGCCCTTCGAATGTACCGTCTGCGGTAAGGCGTTTACCCAATCCGGTAATTTGAAGACGCACATGCGGACtcatacgggcgagaagccgtTTAGATGTCCCGTCTGTGACGATAGCTTTGCTTTGTCGGACCACTTGAAGGTGCACGTGATGATTCATGCGGGCGAGAAGTCTTTCAAGTGCGTCGTCTGCGATAAGGCCTTCACGCAATCCGGTAATTTGAAAATGCACGTGCGGCTTCATACCGGCGAGAAGCCTTTCAGCTGTACCGTGTGCGATAAGACCTTCACACGGTCCGGtaatttgaaaacgcacatgctgCTCCATACGGGCGAGAGGCGCTTCAAGTGCCCCGTCTGCGGTAAGGCTTTCGCGCAGTCCGACGGTTTGAAAATGCACATGTGCgtccacacgggcgagaagccttACAAGTGTCCCGTGTGTGATAAGACCTTCGCTTGGTCCGGCAATTTGAAAAACCACATGCGCCGTCATACGGGGGAAAAGCCTTTCAAGTGCACCGTCTGCGGTAAGACTTGTACTCGGTCCGACGTTTTGAAGAAGCACGTGCTTCGCCACACGGGCGAGAAGGCCTTTAAGTGTACCGTATGCGGTAAGGCTTTTGCGCTGTCTGACGGCTTGAAGATGCACATGAGCgtccacacgggcgagaagccttGCAAGTGTACCTTCTGCGGTAAGGCCTTCACTTGTTCGAGTAATCTAAGAAAGCACGTACGGGtccatacgggcgagaagccctTCGAGTGCCCCGTCTGTGGCAAAGGTTTTAACGAATCAGCCGCCTTGAAacagcacatgcgccttcacaccggcgagaagccttttaaatgccCCACCTGTGGTACGGCCTTTACCCGGTCCGGCTGTTTGAAGAAGCACGTGCTTCGTCATACAGGCGAAGAGCCTCTTTAA
- Protein Sequence
- MGGAEASTCDWCLRETPVETIQEELWRFWKIISAEVPLLESRRNICESCKSRYEEFMTYVETCKTHASLVEKALLPPGRVGDGPSNDHLYRPSVKEEVLTGDESGTAFPPSPFKCSYCGKAYVRSSSLTKHVRLHTGEPALKCPVCDKAFTQSGNLKRHVRLHAVEAPLRCSVCGKTCARFGRLMTHMRVHTGERPFECTVCGKAFTQSGNLKTHMRTHTGEKPFRCPVCDDSFALSDHLKVHVMIHAGEKSFKCVVCDKAFTQSGNLKMHVRLHTGEKPFSCTVCDKTFTRSGNLKTHMLLHTGERRFKCPVCGKAFAQSDGLKMHMCVHTGEKPYKCPVCDKTFAWSGNLKNHMRRHTGEKPFKCTVCGKTCTRSDVLKKHVLRHTGEKAFKCTVCGKAFALSDGLKMHMSVHTGEKPCKCTFCGKAFTCSSNLRKHVRVHTGEKPFECPVCGKGFNESAALKQHMRLHTGEKPFKCPTCGTAFTRSGCLKKHVLRHTGEEPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392917; iTF_00393238;
- 90% Identity
- iTF_00392917; iTF_00393238;
- 80% Identity
- iTF_00392917; iTF_00393238;