Cpri004683.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- lolal
- Assembly
- GCA_963576515.1
- Location
- OY754938.1:20372722-20373432[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-32 5.8e-30 103.9 0.1 1 101 29 125 29 130 0.94
Sequence Information
- Coding Sequence
- ATGGCTGGGGAACCTCgcgagcagcagcagcaacagcaatttttcctgaaatgGAACGATTTCCAAAGCAATATGGTCTCGTCCTTTCGGCACCTAAGGGACGAGAAGAGTTTCACGGACGTGACGTTGGCCTGCGAGGGCCAGACATGTAAAGCTCACAAAATGGTCTTGTCCGCGTGTAGTCCGTACTTCAAAAGCTTATTGGAAGAAAATCCATCGAAACATCCAATTATAATCTTGAAGGACGTGGCGTACAGTCACTTACAGGCGATCCTAGAGTTCATGTATGCGGGTGAGGTGAACGTCAGCCAAGAGCAGCTGCCCGCGTTTTTAAAAACGGCAGACAGGCTGAAAGTGAAGGGTCTCGCAGAGGCGCCCCAAGCGATAAAAAGGGAATAG
- Protein Sequence
- MAGEPREQQQQQQFFLKWNDFQSNMVSSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKSLLEENPSKHPIIILKDVAYSHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAEAPQAIKRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00139785;
- 90% Identity
- iTF_00808442;
- 80% Identity
- iTF_00722209; iTF_01239265; iTF_00030306; iTF_00196418; iTF_01227426; iTF_00031203; iTF_01244195; iTF_00032132; iTF_00413636; iTF_00789444; iTF_01284836; iTF_00151813; iTF_00949989; iTF_01107685; iTF_01351877; iTF_00167720; iTF_01410088; iTF_00388809; iTF_01307337; iTF_00415211; iTF_01290507; iTF_01480235; iTF_00755884; iTF_00395565; iTF_01518157; iTF_00870670; iTF_00166191; iTF_00399631; iTF_00838705; iTF_00003858; iTF_00854130; iTF_01329906; iTF_00951027; iTF_01240947; iTF_01481012; iTF_00753077; iTF_00978485; iTF_01568117; iTF_00444247; iTF_01014744; iTF_01283512; iTF_01295288; iTF_01345785; iTF_01345082; iTF_00639643; iTF_01310683; iTF_00003100; iTF_00110684; iTF_00376412; iTF_00422748; iTF_01278268; iTF_01311644; iTF_00153599; iTF_01040999; iTF_01039369; iTF_00767308; iTF_01104844; iTF_01225932; iTF_00470061; iTF_00029426; iTF_00768886; iTF_01040222; iTF_01121809; iTF_00260759; iTF_00249060;