Cpri008457.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- Paxbp1
- Assembly
- GCA_963576515.1
- Location
- OY754942.1:11206998-11210844[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 1.2e+04 -4.2 0.0 68 94 146 172 139 185 0.72 2 2 7.4e-31 7.6e-27 94.8 0.4 4 272 492 698 490 700 0.91
Sequence Information
- Coding Sequence
- ATGTcgttatttaaaaaaccaaagaaGAACATCGTCCAGCGCAGGGTCTTCACCGAATACGACGATGAGGACGGCGATGAAGTTCCAGTCGAAACGAAAGACGTCAAAACCTCCGAGAAGAAGTCGAAAAAGAAAGACAAATCCAAACAGAAGCAGACCTTACTAAGCTTCGATGCAGAGGAGGAAGGCGAAGTCTTCCAGGTGAAAAAGTCATCACACAGCAAGAAAGTCCTTCGCATGTTcgagaaagagaagaaaaagaaagacaTGACAAAACCAGAGAAAGACTCTACGACCTCCAAAAAGACCGAGATAGTCACCGACGATCTAGTCCTAGTGGTGAACTCGAGTCACAAGAAACCTTCGACACCCCCGTCGTTGATTCTCAATGGGCGCGACGCTCTCTGCGCTGGAAAAGACGACCTGTCCTCCTCTTCAGAAGATGAAACTCCTCGTCTCTCACAATCTGATAATTTCAAGAGGATACTCGAGTCAGGCGCCATACCGGACGCTGCCATGATACATGCCGCGAGGAAGCGACGGCAGAGGGCACGGGAGTTAGGGGACATCATTCCAGTAGAAGAAGAGGAAATTGAAGACAAGGGGAGGCTAGTAAGGGATGACGATCACGAAGAAAGTGACGAGGAGAGGATAGACATGGATGTGAATTTGGTGCGGAGGGATCAAGAGAGGCGGAAGGAACAATTCCTGGCTGCTCAAGAATCCGATCATGAGATGGACGACTGGGAGGCCCAGCAGATCCGCAAGGGTGTGACCGGTGCCGCGATGGAAGCAGCTAGAGAGATTTTCTACCCTGTCGAATGCCCGTCCCCACCGAGAATCTCGGCGCCGGCTATAGAACCGGGGATCCCACGCACCCCTGAGATGATAACGCAGAAACTGCGGGAGCACTATGAGAACTTGTGTGAGTCAAGAGCAAAACATGAAGAGAAATTGAGGAAGACAAGGGAGGAGATCGAGCAGGCCAAGAAGGAGATCGAGGAGTTGAAATTGAAGGGGCCCGAGGCAGCTGATAGGTTCAGATTCTACCAAGAACTCAGAGGCTACATCACCGACTTAGTCGAATGCCTGGATGAGAAGGTCGGTGTGATAACGAACTTAGAACAGCGTGCCATGGATCTCATGGCAAAGAAATCTGAATGGTTGATCGAAAGGAGGAGGCAAGACGTTAGGGATCAGGCAGAAGAGGTGACGAGTAAAGTTTTGGTCGCCAAGAAAGATTTTGATACAGAGGAGAAGCAGAGGAGGGCCGCTGAGCGTGAGggaaggaggacgagaaggagGAGAGCCAGGGAGGTGCCTGGTCAACCCAAACATGTAGAAGGTATGTCCAGTGATGACGAAATCTCCCAGCAGGACATGCTGAACTTCGAGAAGGACCGCGACCAGATCCAGCTGGAGCTCCAAGAGGTATTCGAGGACGTCATTGAGGACTACTCATCTGCGGCGAACATCCTGATACGTTTCGAGCAGTGGCGTTCGAGCGATCTCACCGCTTACACGGAAGCGTACGCGACCTTCTGCCTACCGAAAATCGTCAGCCCCCTCGTGAGGCTCAATCTGGTCTTCTGGGACCCGCTCAACGAGACGGTGGAACTGGAGAAGCTCGACTGGTACAGGACGTTGGCACTGTACGGATTGCATGATGACGAGACGGAGGAGTCCCTAGCGAAGGACCCTGATATTTCACTATTGCCGTCCATTGTCGAGAAAGTGATAGTCCCGAAGCTGACACAGCTAGTGGACAGGTGCTGGGATCCCTTGTCGAGTTCACAGACGTTACGACTAGTAGGGAGCATCAGCCGGTATATACGAAGATTCCCCTCGCTGGGGCCGGGGAGCAAATCCTTACATAACCTTTTTAATGCGGTGTTGCACAAGATGAAGGTCGCTCTAGAACACGACGTTTTCATTCCCATAACACCCAAACTCGCGGAGAGTAAATCTCAGTTCTTTCAAAGACAATTCGCTAGCGGCTTGAAACTCCTGAAGAACATAACGAGTTGGCAGGGTATATTAAACGACAACACGCTCAAAGAACTAGCATTAACATCTCTACTCAACCGATACCTCCTGAGCTCTTTAAAGTTTTGCATGTTGACTGACGCCGTACAGAAAGTTAGGCTCATTAGTCTTATCTTACCGAGGGTTTGGTTGCAGGGGAATACGCCAGAGTTCAAGATGTTCAGTAGTACCATTATGAATCTGCATCAGCAACTTGACAAAAACAACCCACTGCATTTGGAGCCAATCGATACTCTGACTGGGATAATGAAGAGTTTGTTGCATAATTCATAG
- Protein Sequence
- MSLFKKPKKNIVQRRVFTEYDDEDGDEVPVETKDVKTSEKKSKKKDKSKQKQTLLSFDAEEEGEVFQVKKSSHSKKVLRMFEKEKKKKDMTKPEKDSTTSKKTEIVTDDLVLVVNSSHKKPSTPPSLILNGRDALCAGKDDLSSSSEDETPRLSQSDNFKRILESGAIPDAAMIHAARKRRQRARELGDIIPVEEEEIEDKGRLVRDDDHEESDEERIDMDVNLVRRDQERRKEQFLAAQESDHEMDDWEAQQIRKGVTGAAMEAAREIFYPVECPSPPRISAPAIEPGIPRTPEMITQKLREHYENLCESRAKHEEKLRKTREEIEQAKKEIEELKLKGPEAADRFRFYQELRGYITDLVECLDEKVGVITNLEQRAMDLMAKKSEWLIERRRQDVRDQAEEVTSKVLVAKKDFDTEEKQRRAAEREGRRTRRRRAREVPGQPKHVEGMSSDDEISQQDMLNFEKDRDQIQLELQEVFEDVIEDYSSAANILIRFEQWRSSDLTAYTEAYATFCLPKIVSPLVRLNLVFWDPLNETVELEKLDWYRTLALYGLHDDETEESLAKDPDISLLPSIVEKVIVPKLTQLVDRCWDPLSSSQTLRLVGSISRYIRRFPSLGPGSKSLHNLFNAVLHKMKVALEHDVFIPITPKLAESKSQFFQRQFASGLKLLKNITSWQGILNDNTLKELALTSLLNRYLLSSLKFCMLTDAVQKVRLISLILPRVWLQGNTPEFKMFSSTIMNLHQQLDKNNPLHLEPIDTLTGIMKSLLHNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00391927;
- 90% Identity
- iTF_00391927;
- 80% Identity
- -