Cpri005774.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- bab2
- Assembly
- GCA_963576515.1
- Location
- OY754939.1:17668427-17670492[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-15 4.5e-12 45.7 0.1 3 45 349 391 347 391 0.92 2 2 0.28 6.4e+02 0.4 0.6 6 17 465 477 461 480 0.81
Sequence Information
- Coding Sequence
- ATGGGTACCGCACAACAGTACTGCCTCCGCTGGAACAACCACCGTTCCAACCTCCTCACGGTATTCGACGAGCTCCTCCAGAACGAAGCGTTCACGGACGTGACGCTCGCCTGCGAGAGGGGCGCCCCGATCAAGTGCCACAGGATGGTCCTCGCCGCCTGCTCGCCCTATTTCCAGAACCTTTTCACCGACCTGCCGTGCAAGCACCCCGTCGTGGTGCTGAAGGACGTGAAGTACTCAGAGATCAAGGCGATACTGGAGTACATGTACCGCGGCGAGGTGAACGTCGCCCAGGACCAGCTCGCCGCCCTGCTGAAGGTCGCCGAGGCGCTCAAGGTGAAGGGCCTGGTGGAGGAGAACAGGGGTCACAGCAGGCGGCCGAAGGAGGAACCGATCGATCACTCGCCCTCGTCCGTGACGGCCTCGAACGCCGTCCCGCAGGTCGGCGTCCACGCGGGCGGCCCGGGCGGCTCGCCCCCACACCCGACCAACGTCTACAAGAGCCCGTACAACATGTACGCGGGCGGCAAGCCGCAGGAGTCGCGGCTCGGGCTGCCCATGTGGGCGGTCCCGGGGCTGCCGCTGCCGCAGCACAGCTCGCCCGTGCCGAGCTCGAACCACCCGCACGCGGCGATGCTCAACAGCTACGAGACGACGGCCGCCTCGGACATGTGCCCGTTGAAGAGGAAGAAACTCTCGAGCCTGCTCATGAACAGGGACACCCCCATCCTGAGGACCGTGCTCGGCCAGGGGCAGAGCGACTCGCCTCAGCCCGTCAGCCTCGTCTGCCATCCGGACGGGGCGGAGAACTCTAACGGAAACGAGGACCGACTGAAGCACATGAAGAACGAACCGTCCGAAGACGCCCAGTCGCCTTACACGGACTTCACCCCGATGAACGACGAGGAGGACAAGTCTAAGCTGGCGATCCCGTCCTCTTCCCCGCAGTCCTTCAGCCACGAGATCCGCGGCGTCTCGTCCGGCATCGCGACGTACGTCCCGACGCAGAAGCCCGAATGGAAGCGGTACAAGCAATACACGAGGAACGACATAATGTCCGCGATCGAGGCCGTCCGGAACGGGATGTCCGCCCTGCAGGCGGCGAGGAAGTACGGCGTGCCCTCGAGGACGCTCTACGACAAGGTGAAGAAGCTGGGGATCACGACGAGCAGGCCGTTCAAGAGGGGCACGAACGGCAGCTCGACCTGTTTCCAGTACGGCGGCACCGGCTCGCCGTACGGGGGCCACCTGTCCGAGCCGGAcgagggcggcggcggcggcggcggccccACCAACAACAACTCCGCCCTGCTCGAGGCGAGCACGTTCCTACAGCAGGCGTTCGACAGCAGGGGCGGCGACGAGCGGGAGGCGCTCGCCGcgatggcggcggcggcggccgcccACGCCGTCGCCTCCGGCCACTCGACGAGCCCGAGCAACCACGGGCGCGCGAGGAGCCCGAGCCCGAGCCCGACGATGATCAAGTACATCAGGCACGCGAGCATGACGCCCTCGCCGGCCCCCGGCAGCGAGCACCACAGCCACAGCCACAGCGAGACCAACGGCAGCTCCGAGAGGGAgcacgacgacgacgaggaccaCGTCGAGGACCTCTCGATCGGCAGCAGGAAGGAGTCGAGGGAGTCGCGGGTCATCATGCCGCCCATGAACCAGGTCTCGGCCATCATGAAGAAGGAGGAGATGCTCATCGACACCCTCAAAGAGGAGGCGGCCCGCCGCGAGGTAAGCGTCGAATGCGACGGCGAGTAA
- Protein Sequence
- MGTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACERGAPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRGHSRRPKEEPIDHSPSSVTASNAVPQVGVHAGGPGGSPPHPTNVYKSPYNMYAGGKPQESRLGLPMWAVPGLPLPQHSSPVPSSNHPHAAMLNSYETTAASDMCPLKRKKLSSLLMNRDTPILRTVLGQGQSDSPQPVSLVCHPDGAENSNGNEDRLKHMKNEPSEDAQSPYTDFTPMNDEEDKSKLAIPSSSPQSFSHEIRGVSSGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGTNGSSTCFQYGGTGSPYGGHLSEPDEGGGGGGGPTNNNSALLEASTFLQQAFDSRGGDEREALAAMAAAAAAHAVASGHSTSPSNHGRARSPSPSPTMIKYIRHASMTPSPAPGSEHHSHSHSETNGSSEREHDDDEDHVEDLSIGSRKESRESRVIMPPMNQVSAIMKKEEMLIDTLKEEAARREVSVECDGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00392845;
- 80% Identity
- iTF_00392845;