Cmor006507.1
Basic Information
- Insect
- Cryptocephalus moraei
- Gene Symbol
- ZNF219
- Assembly
- GCA_946251935.1
- Location
- CAMIUL010000163.1:689473-694243[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0011 2 8.9 0.1 26 52 108 134 104 136 0.87 2 4 0.0011 2.1 8.8 0.0 21 48 145 172 141 176 0.87 3 4 0.01 18 5.8 0.1 21 46 173 198 170 204 0.85 4 4 0.0024 4.5 7.8 0.0 21 44 201 224 194 228 0.88
Sequence Information
- Coding Sequence
- ATGAGCGACGCCATGAAGGCGACTACTTGCGATTGGTGCTTGTGCGAGGCACCGGTTCGCACGATCGAGGAGAGGTTATGGGGCTTCTGGGGGGTAATCAGCAATGAAGCGCCGCTCTTGGAATCCCTGAGAGACATCTGCGACGGATGCACGGCGCGCTACGACGGATTCTGCAAGTACATTGAAAGGTGTAAGAGCAACGAGTCAGTTGTCGAGAAGGTTCTCTCCGTCGGGACTGTCAAAGATGAACCGATGATTGACATTGAGTACAACCCGTTAACCATTGAGGGGGATGGAccggctgatatgggcgttcagctggcgtgttcgtgctgcggcaagatcttcggcaattcgaacaacctgaagaggcacctgcgggtccacaccggcgagaaacctcacttgaacatccacgtgcgcctccacacgggcgagaaaccgttcaagtgccctcagtgcgacaaggccttcactcagtccggcagcctgaacagccacctgcgcgtccatacgggcgagaagccgttcaagtgtccacgctgcgacaaggcgttcgccgagtccgcccacctgaggagccactcgcgcatccacactggcgagaaaccgttcaagtgtcccgagtgcgacaaggccttcgcccagtcgtactacctgaagagccacctacCGATTTTCGGGGACGACGGACTACGTGCCGAACGAAGGTCTCCGGATTTCGTCCAGTCGTTGGGTTTCGTGGGAACCCCCGCGAAATGGGAAGGCCCGGAGGAATCGTCACGGAGATTCGGCAAAACGGGAAAAAGGAGGACACTTCTGATTGTTGACGTGTCGCGCACGGTCGATATTTAG
- Protein Sequence
- MSDAMKATTCDWCLCEAPVRTIEERLWGFWGVISNEAPLLESLRDICDGCTARYDGFCKYIERCKSNESVVEKVLSVGTVKDEPMIDIEYNPLTIEGDGPADMGVQLACSCCGKIFGNSNNLKRHLRVHTGEKPHLNIHVRLHTGEKPFKCPQCDKAFTQSGSLNSHLRVHTGEKPFKCPRCDKAFAESAHLRSHSRIHTGEKPFKCPECDKAFAQSYYLKSHLPIFGDDGLRAERRSPDFVQSLGFVGTPAKWEGPEESSRRFGKTGKRRTLLIVDVSRTVDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392171;
- 90% Identity
- iTF_00392171;
- 80% Identity
- iTF_00392171;