Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000206.1:391879-399471[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.039 3.4 8.6 1.3 2 23 257 279 257 279 0.96

2 19 0.19 16 6.5 1.1 1 19 405 423 405 426 0.95

3 19 0.049 4.2 8.3 1.9 1 23 455 478 455 478 0.91

4 19 0.059 5.1 8.1 0.2 1 23 511 534 511 534 0.90

5 19 0.00048 0.041 14.6 2.7 2 23 613 635 613 635 0.97

6 19 0.89 77 4.3 0.1 1 12 652 662 652 674 0.77

7 19 0.00089 0.077 13.8 2.5 2 23 678 699 677 699 0.96

8 19 2.9 2.5e+02 2.7 0.4 2 19 727 744 726 748 0.74

9 19 0.0081 0.7 10.8 0.7 1 23 759 782 759 782 0.96

10 19 0.084 7.3 7.6 5.1 2 23 796 817 796 817 0.97

11 19 6.2e-05 0.0054 17.4 8.5 1 23 845 867 845 867 0.98

12 19 0.0015 0.13 13.1 0.4 1 23 910 932 910 932 0.96

13 19 0.0036 0.31 11.9 0.3 2 23 947 969 946 969 0.92

14 19 0.00093 0.081 13.7 2.5 1 23 987 1009 987 1009 0.93

15 19 1.5 1.3e+02 3.6 0.1 1 23 1060 1083 1060 1083 0.93

16 19 4.3e-05 0.0037 17.9 1.4 2 23 1094 1115 1094 1115 0.97

17 19 4.2e-05 0.0036 18.0 0.2 1 23 1142 1165 1142 1165 0.96

18 19 4e-05 0.0035 18.0 2.0 1 23 1173 1195 1173 1195 0.98

19 19 0.00014 0.012 16.3 0.1 1 23 1210 1233 1210 1233 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.039	3.4	8.6	1.3	2	23	257	279	257	279	0.96
2	19	0.19	16	6.5	1.1	1	19	405	423	405	426	0.95
3	19	0.049	4.2	8.3	1.9	1	23	455	478	455	478	0.91
4	19	0.059	5.1	8.1	0.2	1	23	511	534	511	534	0.90
5	19	0.00048	0.041	14.6	2.7	2	23	613	635	613	635	0.97
6	19	0.89	77	4.3	0.1	1	12	652	662	652	674	0.77
7	19	0.00089	0.077	13.8	2.5	2	23	678	699	677	699	0.96
8	19	2.9	2.5e+02	2.7	0.4	2	19	727	744	726	748	0.74
9	19	0.0081	0.7	10.8	0.7	1	23	759	782	759	782	0.96
10	19	0.084	7.3	7.6	5.1	2	23	796	817	796	817	0.97
11	19	6.2e-05	0.0054	17.4	8.5	1	23	845	867	845	867	0.98
12	19	0.0015	0.13	13.1	0.4	1	23	910	932	910	932	0.96
13	19	0.0036	0.31	11.9	0.3	2	23	947	969	946	969	0.92
14	19	0.00093	0.081	13.7	2.5	1	23	987	1009	987	1009	0.93
15	19	1.5	1.3e+02	3.6	0.1	1	23	1060	1083	1060	1083	0.93
16	19	4.3e-05	0.0037	17.9	1.4	2	23	1094	1115	1094	1115	0.97
17	19	4.2e-05	0.0036	18.0	0.2	1	23	1142	1165	1142	1165	0.96
18	19	4e-05	0.0035	18.0	2.0	1	23	1173	1195	1173	1195	0.98
19	19	0.00014	0.012	16.3	0.1	1	23	1210	1233	1210	1233	0.97

Sequence Information

Coding Sequence: ATGGCCGACACGAGGCACGGCAACTTCCAATCGTGCTGCCGACTCTGCCTGAACGAGAAGGTCGAAAATCTGAGGCCCGTCTTCGGCGACGATGGCGCGCTGCACGAGAGGATCGCCGAGTTCGTCTCCGTCGAGGTGAGTCGGGCCCTCCGCGTCCCCAGGGGGCGATATTCCTCCGGGAACGGGCGACGTTCGTGCCGTTTCCCGTCCGTGTGTCGTTGTCGTCGGGAGAGCTGGTATCAAATATGGCTGCTGCTCGCCTCTACGACGACGACGTCGACGTCGTCTCCCGCTGGCCCCGGCCGCGGCCGCCCTTCCTGCTTCGGGCCGTCCCGTCCCGGGGCGACGGCGGCCCCCGTCTCTTGCTCACGTTGCACGCTCATTATGGCGGCCATCCAAGAGTCGGATAAAATATCGACAAAAATCTGCGACCAGTGCATTATGAAAGTGAACCACTGGCACGCCTACAAGCAACGTTGTGCCCGAAACCAAAGCAAACTAGTACAATGGATGAACAACGACAGCGCCCAGAGCAACGGGTTCCCCGAGTTGCTCGACATGAGCATACAGATCAAGCAGGAACCGAAAGATGTCATCGAGAACGGCCCGCACGTCGAACAAGTGGAGGCGTTCACCATCAAACCCGAGCCGATCGAGCTGCACGATGAATCCATGGAGGAGGAGTACAACGAGCTGCCGCCCGACCTCACCCCTGAGGTCAGCTTAGGGACGGAGGAGGATACGCACGGTGATGATGAAAATAGTAGACGGTGTAGTATCTGTTATAAGCTTTTTAGCAATGTAGGGAACAAAAAGAAGCACGAGAAAAGTATTCATCGCGTGCATGGAACCTTCCGCAAAAGTATTCTTAACGTTGCCACCGAGACTCACGTCAACGGCAGTTTCTACGATGAAATGGCCCAGGAGGAATCCTCCCTGAACTTCGACCCGGACCGTTCACAGTCCGCCTCGATCGAGCAAGACCTGGAACAGGAGAAGATCCAATACGCAGCAGGCCTAAAGCTGATCCAGACGAACTCGACTCCGATCTCCATGGAGCCTCTGTCGAAAATCGAGCTGAGCTACATTGAGAAATGCAAGGCCATGGTGACCATGCACAAGACGCTGGAGTGCGCCTGCCACAACGTCACCCACCACAACCTCAAGGGATTGCTCTCTCACTTGCGCGCCTTGAGGATATGGTTCCCGGTCTTCACCTGCTACAGCTGCATGATCACCTTCACCGACAGATCAACGTTCACCAAACACAATGCGCGTTGCCCCAACCCGCAGCTGGAGACGATAATGAAACTCAGCAACCTGAAGAAACGCAGCGAGGTCAAGACCAGGCTGTACCAGAACTTCCGTTGCGCTTTGTGCAAGTTCATGTTCAGTTTCCACGAGGATTTCATCAAGCACGTCGACGAAGACCACGCGTCTGTCGAACTGCCCATCACCTGTACTTGCAGCAGGCAATTCGATACCCTAGAGGATTACAAGGATCACGTTTATGTCAGTTGCATGGTGGACTTTTACTGCGACATTTGTTTCATCACTACCAAAACGCTGGAAGGATTTCAGAAGCACGCCGCTGAGGTTCACGACAACTCCGAGGGATTCATATTGTTGCAGGATGATAATTATAAAGCTAGAAGGGCATTGGCGAATACGAGCAGTAAGGAGTACTCAAAGGAGTTCGTCGACGAGAGTGCTATTATCACCGGCAAAAGGGAACGTAGGGCATCCCAGAGGATCCCATTCGAGGAATATGATGATTCCACAACCAACAACAAGGTAGTGATCAATCCGATAGTTGGAGCTAAAACTCAGAACCGTGTTTGTCCAGAGTGTTCCAAAGAATACTGCTCTTACAACAACATGATGAGACATTACAGGACCCGACACGTAAAACAGAAAGGTAAAATGAAGGCGGACTTAGGAGAAAGTTCTTACTATTCTTGCCCAGATTGTAATGAAATGTACCCGGCAGAGGTCTGGCAGAAACACTTGGTCGATAAACATCAACCGAAATCATGTGACAAGTGTGACAAGGTGTTCCAATTCCAGTCCGAGCTAGACCACCACAGATCTGTCCATTTGAATCTGAAAGTATATAGAGACTCCAAGACTCAGTCATACAAGAGCACAGTGATCAGTCCCGGCGCTGATAAATTAACTGTTTGTGAGATTTGCGATTTGGCCTTCCAGTCTCAGATCGAATGCGACGAGCATAAACTCATCCACGAGGACAGTAGTGTCGCGGAAAACAAACGGTTCTCCTGTCTCACTTGCAAGAAAACTTACGCCAGCTACGCCGGTTTGTGGGAGCACAACAGGAGCAAACACCCAGAGAAGAAGACACCTTATCAGAATTCCTGGCCTAGGAAGTGCGACCATTGTGATAAAGTGTGCCATACTGGAGCTGCTTTGTACAGACACAAACAAATCCACAACAAGGACCCGGTACCTAATGATGCACACAAGAGGACGTCCATGAAACCCAAGAAGAATTCCGAGGAAGACGAGTCATACCACACTTGCAACAAGTGTTTCAAAGTGTTCTCTTCTCGATGTAATCTAAAGAACCACATGAAATCCCATGGTACGAGCCAGGCAACGACCAAACGACAGAAGCAGAAGGCTGCAGTCAGTGTAAAAGAAGAGAGCGTCTCAGAGGATGACCTACCCGATCTGACCAAAGATTCTGATACTAAAGTGCCTCTTATCTTTACTTGTGATGTGTGCGTGATGACGTTCCCTTCAAAGAATGCTTTAAAGACTCATAAAGAAGAACACGAACTGGAAGAGAAGCCCTCCACTAGAAGATTGAACAGAATATACTGCAAACACTGTAAAATACCCTTCGCGACTACGATACTTCTAGCGAAGCATATGGACGCGGAGCACAACGAGACTGTTAAGACGAAATTAGGCAAATCTGGCGGAAAGAACCAACAGTTCTCATGTCACATCTGCAAGAAGTCGTTCCATTCAACCGCAGCGCTGACCACTCACGTCGGGTGGCACAAACGCGGCTTGGATGTGAGCCACTCGAGCAAATCTCCCTCTGGCAAGCCGCCGAAGTTGCTGAAACACTGCAAAATCGAGAAACCAGCCACAATGGTCAGGCCCAGGCCGACGGCCGCCCTCCTTCAAATCAAGCCCAAGCTCCAGCCATTCCAGTGCACCACATGCTTGGCTCAATTACCGAACGAGACGGCCCTCCAGGTGCACGTTCTAGAGAACCACCGCAGCGTAAGCGCCATCATGTTGCTGCCGAGGTGCAACGTCTGCAACAAAGACTTCAGCACCCAGGATGAGTACGAGAACCACAAGCGCCTCCACGACTTCCTCGAGAGGCAGAAGCAGCACGAGAGCAAGATGATGATGGAGCACCACGAGCCGAAAAAGCACCAGAAGAACTTCCCGTGCAACTACTGCACTGCGGGGTTCAGTCGGTCCGACACACTCGCCGCCCACATCAAGCAGTACCACAAGGAGTACATCCAGACGGAATTCAGGTGCCCCCACTGCGACAGACTGTTCGAGAAGCAGAACTCCCTGACGATACACTTGAAGGTGCACGAGAAACAGAAGGTGCTCATGGACGACACCTCCAGGCGCCTATACTCGTGCTCCATCTGCAACATGGGGTTCAATGTACCGAAGGATCTGAGGGCACATACGATCACCAGCCATCCCTTCTGA
Protein Sequence: MADTRHGNFQSCCRLCLNEKVENLRPVFGDDGALHERIAEFVSVEVSRALRVPRGRYSSGNGRRSCRFPSVCRCRRESWYQIWLLLASTTTTSTSSPAGPGRGRPSCFGPSRPGATAAPVSCSRCTLIMAAIQESDKISTKICDQCIMKVNHWHAYKQRCARNQSKLVQWMNNDSAQSNGFPELLDMSIQIKQEPKDVIENGPHVEQVEAFTIKPEPIELHDESMEEEYNELPPDLTPEVSLGTEEDTHGDDENSRRCSICYKLFSNVGNKKKHEKSIHRVHGTFRKSILNVATETHVNGSFYDEMAQEESSLNFDPDRSQSASIEQDLEQEKIQYAAGLKLIQTNSTPISMEPLSKIELSYIEKCKAMVTMHKTLECACHNVTHHNLKGLLSHLRALRIWFPVFTCYSCMITFTDRSTFTKHNARCPNPQLETIMKLSNLKKRSEVKTRLYQNFRCALCKFMFSFHEDFIKHVDEDHASVELPITCTCSRQFDTLEDYKDHVYVSCMVDFYCDICFITTKTLEGFQKHAAEVHDNSEGFILLQDDNYKARRALANTSSKEYSKEFVDESAIITGKRERRASQRIPFEEYDDSTTNNKVVINPIVGAKTQNRVCPECSKEYCSYNNMMRHYRTRHVKQKGKMKADLGESSYYSCPDCNEMYPAEVWQKHLVDKHQPKSCDKCDKVFQFQSELDHHRSVHLNLKVYRDSKTQSYKSTVISPGADKLTVCEICDLAFQSQIECDEHKLIHEDSSVAENKRFSCLTCKKTYASYAGLWEHNRSKHPEKKTPYQNSWPRKCDHCDKVCHTGAALYRHKQIHNKDPVPNDAHKRTSMKPKKNSEEDESYHTCNKCFKVFSSRCNLKNHMKSHGTSQATTKRQKQKAAVSVKEESVSEDDLPDLTKDSDTKVPLIFTCDVCVMTFPSKNALKTHKEEHELEEKPSTRRLNRIYCKHCKIPFATTILLAKHMDAEHNETVKTKLGKSGGKNQQFSCHICKKSFHSTAALTTHVGWHKRGLDVSHSSKSPSGKPPKLLKHCKIEKPATMVRPRPTAALLQIKPKLQPFQCTTCLAQLPNETALQVHVLENHRSVSAIMLLPRCNVCNKDFSTQDEYENHKRLHDFLERQKQHESKMMMEHHEPKKHQKNFPCNYCTAGFSRSDTLAAHIKQYHKEYIQTEFRCPHCDRLFEKQNSLTIHLKVHEKQKVLMDDTSRRLYSCSICNMGFNVPKDLRAHTITSHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392984;
90% Identity: -
80% Identity: -