Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000189.1:335856-342771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00027 0.024 15.4 5.2 1 23 210 232 210 232 0.97

2 11 4.5e-05 0.0039 17.9 1.1 1 23 238 260 238 260 0.98

3 11 2.5e-05 0.0021 18.7 1.9 1 23 266 289 266 289 0.95

4 11 0.0081 0.71 10.8 3.5 1 21 295 315 295 317 0.95

5 11 0.00013 0.011 16.4 1.9 1 23 323 345 323 345 0.99

6 11 5e-06 0.00043 20.9 0.9 1 23 351 373 351 373 0.99

7 11 0.00034 0.03 15.1 1.5 1 23 381 404 381 404 0.97

8 11 7.6e-05 0.0066 17.1 2.4 2 23 411 432 410 432 0.96

9 11 0.0003 0.026 15.3 0.2 1 23 438 460 438 460 0.98

10 11 2.1e-06 0.00019 22.0 3.5 1 23 466 489 466 489 0.96

11 11 5e-07 4.3e-05 24.0 1.2 1 23 503 525 503 525 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00027	0.024	15.4	5.2	1	23	210	232	210	232	0.97
2	11	4.5e-05	0.0039	17.9	1.1	1	23	238	260	238	260	0.98
3	11	2.5e-05	0.0021	18.7	1.9	1	23	266	289	266	289	0.95
4	11	0.0081	0.71	10.8	3.5	1	21	295	315	295	317	0.95
5	11	0.00013	0.011	16.4	1.9	1	23	323	345	323	345	0.99
6	11	5e-06	0.00043	20.9	0.9	1	23	351	373	351	373	0.99
7	11	0.00034	0.03	15.1	1.5	1	23	381	404	381	404	0.97
8	11	7.6e-05	0.0066	17.1	2.4	2	23	411	432	410	432	0.96
9	11	0.0003	0.026	15.3	0.2	1	23	438	460	438	460	0.98
10	11	2.1e-06	0.00019	22.0	3.5	1	23	466	489	466	489	0.96
11	11	5e-07	4.3e-05	24.0	1.2	1	23	503	525	503	525	0.96

Sequence Information

Coding Sequence: ATGTCGGTTTCGTTCACGGAAGCGCCGACGATAAAACTCGAGGACAATGCTGAGACCGTCACCGAGATCCAGAGCTACCTGGCCGGTTTCCAGAAAGAGATCGGCGGCGACATCTCTATCCAGCAATGTTCCAGTTCTGGCGGAGCTGGCCAAGATGGAGAGACCGAGGAGGGCACCTACTATGTCGATCAGGCCGGACACTATTATTTCCAGGCCAAGAGGGATTCCCTTCCGGTCATGACCGTCTTGCCGGGTTTGACCGGGAGTGGGGAGGATAAGGAGGAGGAGTTCATCGGCAATGACAAGATCGAAGGGAGCGGCGAGGAGACTGAAGAGCCTGTTATTCAGCAGGAAGAGAACAACCAGATAGTGATAAACTCAGGAAACGCCTACCAGAGGGTGACCGTTGTACCTGCCGATGAAAATTCCGGAGAGCTTAGTTACGTGCTGATTGTGCAGGATCCGGAAAGCGTCAAAGATGGGGAACAGACCGACGGGGAGCAGGACATGGCAGTATATGATTTCGATGAGGCCGAGGACGGCGCGATGGACGATTCCGACATTGAGGACGACAAGACCAAGATAGTGAAGATCGTGCCGAGGAAGTCCCAGACAGTGACCCAGGCTCACATGTGTAACTATTGCAACTACACGAGCTCCAAgaggtacctgctgtccaggcacatgaaatcccactcggaagagcggccacacaagtgcggggtctgcgagagggggttcaagacgatggcctccctgcagaaccacgtcaacacacatacgggcaccaagccgcacgcctgcaagcactgtgatgcagccttcACTACTTCAGGGGAGCTCGTCAGgcacgtccgctacaggcacacccacgagaagccccacaaatgcaccgagtgcgactacgctagcgtcgagctgtcgaaactcaagagacacataaggtgtcacacgggcgaaagaccttaccagtgtccacactgcacgtacgccagtccggacactttcaaactgaaacgtcacctcaggatccacacgggcgagaaaccgtaccagtgcgacatatgccaggcgaggttcacgcagtccaacagtttgaaagcccacaagttgacacataacaTCGGAGATAAGCCGATCTTCCAGTGCGACCTCTGCCCGACGACTTGCGGCAGGAAGACAGATCTCAGGATTCACGTGCAAAAGTTGCACACTTCGGATAAACCCTTGAAATGTAAGAGATGCGGCAAGTCCTTCCCAGATCGGTACAGTTATAAGCTACATAACAAGTCCCACGAAGGCGAGAAGTGCTACAAGTGCGACCTCTGCCCCTACGCCTCGATATCCGCCCGCCACCTCGAGTCGCACATCCTGATCCACACAGACCAGAAACCATTCCAGTGCAGCAAGTGCGACCAGTCGTTCAGGCAGAAACAGCTGCTGAAACGACACCAGAACCTCTACCACAACCCGGAGTACATACCGCCGCCGCCCAGAGAGAAGACGCACGAGTGCCCGGAGTGCACGCGCGCCTTCCGCCACAAGGGCAACCTCATCAGGCACATGGCCGCCCACGATCCGGACCCGCTCATCCAACAAAAGCAACTCCAACTGAAGCTCGGCAGGCAGAAGAAGATCCAGGTGATAGACGGGCAGCCCGTCGAGGTCATGCCCGGCATCGGCTCCGAGGAGGAGTCCGAGATCGACATGATGGCGGTCGAGGGCTCCGACGGCCAGCAGTACGTCGTCCTCGAGGTGATACAGCTGGCGGACGGCGAGGAGCAGGCCATGGTCGTGAGCGACGGGCCAGGCGAGCTACTCAGCGAGTCAATCCTACCCGACAGCGGTCTGAATGACGAAGTCCTGAAAGCTCTACAGAGCGCCCGGAAAGCCCCCAAGCAAGAGATTACCGTCGAGGATGAAGACGAGGATAAGAAGGTCTCCATGGAAGATATGGAGAACTGCTTTGGTTTTGATGACGACGAGGAGGATGATGATGACCGAAATTCTAAAGACACTATCACGCTTCTCACCGAAATGGACTGA
Protein Sequence: MSVSFTEAPTIKLEDNAETVTEIQSYLAGFQKEIGGDISIQQCSSSGGAGQDGETEEGTYYVDQAGHYYFQAKRDSLPVMTVLPGLTGSGEDKEEEFIGNDKIEGSGEETEEPVIQQEENNQIVINSGNAYQRVTVVPADENSGELSYVLIVQDPESVKDGEQTDGEQDMAVYDFDEAEDGAMDDSDIEDDKTKIVKIVPRKSQTVTQAHMCNYCNYTSSKRYLLSRHMKSHSEERPHKCGVCERGFKTMASLQNHVNTHTGTKPHACKHCDAAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYQCDICQARFTQSNSLKAHKLTHNIGDKPIFQCDLCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSYKLHNKSHEGEKCYKCDLCPYASISARHLESHILIHTDQKPFQCSKCDQSFRQKQLLKRHQNLYHNPEYIPPPPREKTHECPECTRAFRHKGNLIRHMAAHDPDPLIQQKQLQLKLGRQKKIQVIDGQPVEVMPGIGSEEESEIDMMAVEGSDGQQYVVLEVIQLADGEEQAMVVSDGPGELLSESILPDSGLNDEVLKALQSARKAPKQEITVEDEDEDKKVSMEDMENCFGFDDDEEDDDDRNSKDTITLLTEMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01013609;
90% Identity: iTF_00392987;
80% Identity: -