Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000147.1:643074-647039[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.2e-06 0.00037 21.1 3.5 1 23 308 330 308 330 0.97

2 12 2.4e-06 0.00021 21.9 7.2 1 23 336 358 336 358 0.98

3 12 2.1e-06 0.00019 22.0 0.6 1 23 364 386 364 386 0.99

4 12 0.036 3.1 8.7 4.1 1 23 392 414 392 414 0.95

5 12 0.00041 0.036 14.8 0.7 1 23 420 442 420 442 0.97

6 12 1.5e-08 1.3e-06 28.8 3.5 1 23 448 470 448 470 0.98

7 12 2.4e-05 0.0021 18.7 1.0 2 23 476 497 475 497 0.96

8 12 7.7e-07 6.7e-05 23.4 0.9 1 23 503 525 503 525 0.99

9 12 9.2e-05 0.008 16.9 0.8 3 23 532 552 530 552 0.97

10 12 6.6e-06 0.00057 20.5 4.4 2 23 559 580 558 580 0.98

11 12 6.6e-08 5.7e-06 26.8 3.5 1 23 586 608 586 608 0.99

12 12 1.1e-05 0.00098 19.8 0.9 1 23 614 636 614 636 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.2e-06	0.00037	21.1	3.5	1	23	308	330	308	330	0.97
2	12	2.4e-06	0.00021	21.9	7.2	1	23	336	358	336	358	0.98
3	12	2.1e-06	0.00019	22.0	0.6	1	23	364	386	364	386	0.99
4	12	0.036	3.1	8.7	4.1	1	23	392	414	392	414	0.95
5	12	0.00041	0.036	14.8	0.7	1	23	420	442	420	442	0.97
6	12	1.5e-08	1.3e-06	28.8	3.5	1	23	448	470	448	470	0.98
7	12	2.4e-05	0.0021	18.7	1.0	2	23	476	497	475	497	0.96
8	12	7.7e-07	6.7e-05	23.4	0.9	1	23	503	525	503	525	0.99
9	12	9.2e-05	0.008	16.9	0.8	3	23	532	552	530	552	0.97
10	12	6.6e-06	0.00057	20.5	4.4	2	23	559	580	558	580	0.98
11	12	6.6e-08	5.7e-06	26.8	3.5	1	23	586	608	586	608	0.99
12	12	1.1e-05	0.00098	19.8	0.9	1	23	614	636	614	636	0.97

Sequence Information

Coding Sequence: ATGAGCCGTAACTCGTCCGGAGATGTGACCCGCGAGCGACGCGAACGAAGAGCCATGAACAGGATCGAGGTGACCTGCTGTCGGACATGCCTTCGAATCGATTGCACCTTAACGCCGACCAGCACGGAGGACTCCGACTCGATCAAGTACGAGGAGAAGCTGTCTTGTTGCGTATCGGAAGTGTCTTGGTCGAAGGAGGGCTACCCGCCTGTCATATGCGAGCACTGCATAGAGAAGCTCCGTGCCGCGTACGACTTCAGGACGATGTGCATCCAGTCGGACGGGGCGCTCACGAGGTACCTGGAGCACGTGCCTGTCGAGGAGAAGCTCGAGGTCTCTCTGGAGGAGGACCTGTACACGCCGACTAAGTTCGAGTTCGAGATCACTACCCAGGAGGACTCTACCACGGAGCTGATCGTCGAGGATGAGGACCAGCACAGCGATGAGTACTTACACCTGAAGCACTTCTTAGATAACGACGACTTGAGCAAGATCGACAAGGCCGGGTCGCGGTGTAGCACGCCCAATGACGCTCAAGACTTCATCACCGAAGACCTGGACGACGACGACGAACGGCAGTTGCAAGGGATATGCGCTGACGGCGATGAACAGATCCCCTCGGACGATCCGCAGCTGGTCCAGCTACAGGAAACGTCGATCGACGAACATCAACAGACCGAGATCGATTTCGAGGAGCAGATAGATTTCCAGATCAAGGTGACGGAATCGTCGGAATCGCAGATAATACAAGACGAGATACCGACGTTAATGAACGAGGCGCAGCTACCTGCGGACATCGCTACGAAGTCGCCCACGACGACGGGTAACTTACGGGCGAGGCAGGTTATCAAGAGGACCACGGGTACGCAAGTGAGACTCCCCACGCCGGCCAGCGGTACCGAAATCGacgggaagaaacaatattgctgcgttatatgtagcaagcggtatcgcaagaacgcgaaccttaggatacacatgagaacgcacaccggggagaagccgttcgaatgtaaatactgcgagaaaaggttctaccactcgtctcatctcagggagcacatccgacggcatactggcgagaagccgttccaatgtgccgtctgcgacaagagattcacgataaagggggagctcacgatgcacatgaagtcgcacactggggagaaaccgtacgcttgtacttgctgtgatcgtaggtgcctcacctcggccgacctcaaggtgcacatgcgcacccacacgggcgagaagccgttcgcctgtttgacctgcggcaagaagttcgcgagcacttacatcctgaactctcacataaagacgcacaccggcgagcggccgtacgcctgcaaggagtgcgacaagaggttcacgcagagctcccacctgaacgtccacatgaggaagcacacgggcgagaaggtgtcgtgcaggtcgtgcggcgcgaagttcgcgcactcttcgcagctgacggtgcacatgagggagcacaccggcaagcagccgtacaagtgcgccatttgcgataaggtgtgcaactacgcgtccgagctccaggtccacatgatgaagcacacgggccagcgcttcggttgcgcgacctgcgacaagaagttcacgacgctcgcctacctcaacgagcacaaccgcacgcacaccggcgagaacctgtcgacgtgcacgatctgcaacaggcagttcacgcgccaccagtacctcgtgaagcacatgcgcactcacaccggcgagaagccgtacacgtgcacgctgtgcggtaagtgcttcacgcagtcgtcgagcctgcgcgtgcacacgaggatacacacgggggagaaaccgtacgcgtgcgtgcagtgcgacaggaggttcacgacgtcctcggacctgtcggcgcacTCCAAGAAGCATAAGAAGTACATTATGTTGTAG
Protein Sequence: MSRNSSGDVTRERRERRAMNRIEVTCCRTCLRIDCTLTPTSTEDSDSIKYEEKLSCCVSEVSWSKEGYPPVICEHCIEKLRAAYDFRTMCIQSDGALTRYLEHVPVEEKLEVSLEEDLYTPTKFEFEITTQEDSTTELIVEDEDQHSDEYLHLKHFLDNDDLSKIDKAGSRCSTPNDAQDFITEDLDDDDERQLQGICADGDEQIPSDDPQLVQLQETSIDEHQQTEIDFEEQIDFQIKVTESSESQIIQDEIPTLMNEAQLPADIATKSPTTTGNLRARQVIKRTTGTQVRLPTPASGTEIDGKKQYCCVICSKRYRKNANLRIHMRTHTGEKPFECKYCEKRFYHSSHLREHIRRHTGEKPFQCAVCDKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTSADLKVHMRTHTGEKPFACLTCGKKFASTYILNSHIKTHTGERPYACKECDKRFTQSSHLNVHMRKHTGEKVSCRSCGAKFAHSSQLTVHMREHTGKQPYKCAICDKVCNYASELQVHMMKHTGQRFGCATCDKKFTTLAYLNEHNRTHTGENLSTCTICNRQFTRHQYLVKHMRTHTGEKPYTCTLCGKCFTQSSSLRVHTRIHTGEKPYACVQCDRRFTTSSDLSAHSKKHKKYIML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392937;
90% Identity: -
80% Identity: -