Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000086.1:1837152-1846341[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.1e-06 0.00019 22.0 4.8 2 23 154 175 153 175 0.97

2 16 0.0032 0.28 12.0 2.4 2 23 186 207 185 207 0.97

3 16 0.002 0.18 12.7 0.6 1 23 214 236 214 236 0.95

4 16 3.8e-05 0.0033 18.1 0.8 1 23 333 355 333 355 0.99

5 16 4.3e-06 0.00037 21.1 3.7 2 23 362 383 361 383 0.97

6 16 0.00018 0.016 15.9 1.2 2 23 404 426 403 426 0.95

7 16 2.9e-05 0.0025 18.5 1.8 2 23 505 526 504 526 0.96

8 16 1.8e-05 0.0016 19.1 1.1 1 23 532 555 532 555 0.93

9 16 1.3e-06 0.00011 22.7 0.8 1 23 560 582 560 582 0.98

10 16 5.3e-06 0.00046 20.8 1.5 2 23 593 614 592 614 0.97

11 16 1.5e-07 1.3e-05 25.7 0.9 1 23 621 643 621 643 0.97

12 16 2.3e-05 0.002 18.8 1.6 3 23 655 675 653 675 0.92

13 16 7.3e-05 0.0063 17.2 4.6 1 23 681 703 681 703 0.99

14 16 3.2e-05 0.0028 18.3 1.7 1 23 709 731 709 731 0.96

15 16 5.8e-08 5e-06 26.9 0.2 1 23 737 759 737 759 0.99

16 16 0.00038 0.033 14.9 0.1 1 22 765 786 765 789 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.1e-06	0.00019	22.0	4.8	2	23	154	175	153	175	0.97
2	16	0.0032	0.28	12.0	2.4	2	23	186	207	185	207	0.97
3	16	0.002	0.18	12.7	0.6	1	23	214	236	214	236	0.95
4	16	3.8e-05	0.0033	18.1	0.8	1	23	333	355	333	355	0.99
5	16	4.3e-06	0.00037	21.1	3.7	2	23	362	383	361	383	0.97
6	16	0.00018	0.016	15.9	1.2	2	23	404	426	403	426	0.95
7	16	2.9e-05	0.0025	18.5	1.8	2	23	505	526	504	526	0.96
8	16	1.8e-05	0.0016	19.1	1.1	1	23	532	555	532	555	0.93
9	16	1.3e-06	0.00011	22.7	0.8	1	23	560	582	560	582	0.98
10	16	5.3e-06	0.00046	20.8	1.5	2	23	593	614	592	614	0.97
11	16	1.5e-07	1.3e-05	25.7	0.9	1	23	621	643	621	643	0.97
12	16	2.3e-05	0.002	18.8	1.6	3	23	655	675	653	675	0.92
13	16	7.3e-05	0.0063	17.2	4.6	1	23	681	703	681	703	0.99
14	16	3.2e-05	0.0028	18.3	1.7	1	23	709	731	709	731	0.96
15	16	5.8e-08	5e-06	26.9	0.2	1	23	737	759	737	759	0.99
16	16	0.00038	0.033	14.9	0.1	1	22	765	786	765	789	0.91

Sequence Information

Coding Sequence: ATGATTAATAAAGAAGTGGAATTAATAATAGATAAAATTTGCAGGTGTTGCATGTGCGAGAATGAAAACATGCACAACATATTCGATCCAGAGACTGACGCTAACAACTCAAATTCACCATCATTGTTAGAGATGCTTGTAGCTTGTGCTTCTATAGAGGTGAACGCAAAAGACGGTTTGCCGAATAATTTATGTGAAGGTTGTGAAGGGAAATTGAAGACGGCTTACGAGTTCAGGACCCTCTGCCAGAAATCTGACACTGCCCTGAGAGATCTAACGTTAACCGACACGAAAAAAGTAGAACTTAACAAGGAGGAATCGATAGTCGTCCAGCCTGATGTACCTAATGACTTATTCCACGATAACGAGCTATTTGATGAGGAAGATGACCTGCCGTTGGTACAGAGGGAGTATAAACGTAAGCGTGGCAGACCGAGGAAAATGGAAGCCCAAACCTGCAAATGTAAAATATGTAAAAAAGTGTTCACCTCTAAGAAAGACTTGAAAGTACATTTACAAACCCATATTGAGGATAAGATTTTTGATAAAGTACAGCAGTGCTTGTTTTGTGATGTTAAATACTCCCGACTCAATCATCTAGTGCGTCACATAACTAAGCATGATAAACCAGGTCTGAAACATTCTTGTGGAAAGTGCGACAAAACTTTTGAAGCCGCCGTCGATTTACTTAAGCATTCGAATGAACACTTGAACAGTGAAAACAATGATGATCCCGTCGACAAACAAGTCATCAAGCTCGAAACCGAGGCCGACATTAAAATGGAAACGAATGAATTGAGTACCGTAGCTGTTGAAACGAACACAGAAACGCTCGATCAGAATGATACGCATGAGGATTCCACTCCCCCGTTCGATGATTTCCCATTCAGCGACATCGATGACCGTTCTGACGAGGACGACATGTTTATTGAATATGAAGGAAAGAAAGAGAACAAGAAAAAGTCGAAAAGGAATGGTAAAGACAACAATACGCTTTACGAATGTAAGGAATGCTCCAGAGTGTTAACGACTTACATGGGACTGAAGATCCATATGAGGCGACATACAGGATCTTATTTAATTAAGTGTGAGGTTTGTAATAAGTCATTTAGTAAAACGAGTCATTTAATAAAGCATTCGCGTACTCATGGAATCGATGATAAATTAAAAGGCGATACTAAGTCTGAGACCAGAGTAAAAGTGGAAATTCCATGTGAGTACTGCGAAAGAAAATTCAAGTATCGCAAAAGTTTCAAACAACACGTCAAAGTGGAACATGGGATATCTGACGTGGACAGTGATGCAGAGAAATCGACTGAGAACAATAGGAAACCGGATAATGCCACAAACAATGAAGAGTGTTTAGAACAATTGCAGAATGATGCAGATGGTGAACTTTCCACTGGCGACAATCTGAACGTAGAACAGCAGTTTTGCGAAGAGGATGAGGAGGTCGTTGTTAATTTAGAGGTTGATACGCCAAACGTGAAGAAAATACGAGCGAAAAATCAGGTGTGCCATGTATGCGGAGCTTCTTTCGCTAGGGTGAATCATTTGACTCGACACATGACGCTGCATAGGTCAGTCCTAGTGCATCAGTGTGACAGATGCGAAAAGGCGTTCGCTACAGAGAGCCACCTTAAAGCGCACATAGAAGACGAGCATATAAACAAGCCTTATGTGTGTACGGTTTGTAACAAGCCTTTTAGTAGAGGTGAGCATTTGATAAGGCACTTGAAGGTACACCAGAGTAGTCCTGACAAGGAGGAAAATCTGAAATGCTCAATTTGTGATTCAGTTTTTACAAGATCTGATCATTTGGCGCGACACACCAAAATTCACTTACTCCAGGATAAACGACATGTTTGCGTGGATTGTGGCAAGGCCTTTAATAGGTTGGATAATTTAAGAACCCACCAGAGGATTCATACGGGAATAAAAGACACTTCCAAATTGCATTTGTGCATTTATTGTGGGAAGGAGTTCAATAATTCCAGTAACATGATTGTCCATATGAGACGTCACACGGGCGAACGACCATATAAATGTACTGAATGCGGCAAGGGGTTCCCGAGGTCGCATGATTTAAAATGCCATGAACGTACACATTCAGGAGAAAAGCCATATTTATGCACATTATGTGGCAAATCGTTTAATAAGAGTAACAAGCTAttaaggcacagtcgcgtccataccggcgaacgtccttacgtgtgcaacatctgcggtcgggctttcacccaatccaacgatctggcgttgcacatgcgccgtcacacgggcgcccgcccttacgcgtgcggtgtctgccccgccaggtttatccagtccggtcaattgaagaaccacaGGAGGGCCTCGGGCCACTGGATGGAGACCCAACCGGACCTCAAGGGCGGCCATCGGGTCGAGCCGGTCACGCCGGCGCACGAACCGATGCCCATCAGGTTTAAGTCTCACAAGGTGAGAAGCAAGGAAGAGCCAATGGAATCGGTCAAACCGGCCATAACTCCGATCGCCGACACGCAATCGTCGTTGACAGAACACTCCGTGTCCGTGGAAGAGATCCAGGCTCAACCGCAGCGCATCCTGATGGGCATCATGGGAAACATAAAGTTGCAAGCAGCAGACTCGCTGCTGATCGACAGCACCAAACTGGTGGAGCTCCATACCGGCCTGGTGAACCTGCCGACGGTTATACAGACAGCTAACGGGGAGGAGATCAAGTTGAAGTCCGAAGTGCAGAACTTCAATATCACTCAGGTCGAGGAGGTGGATAAGGACGAGGTGTCTGGTGGGTTTCAGGATGCCACAGTGATCTATTCCAGCGTCGGCCATACGTCAACTACGTTCACTACTAGTGAAAATTTTAATTTTCAAAATTACCAGTGA
Protein Sequence: MINKEVELIIDKICRCCMCENENMHNIFDPETDANNSNSPSLLEMLVACASIEVNAKDGLPNNLCEGCEGKLKTAYEFRTLCQKSDTALRDLTLTDTKKVELNKEESIVVQPDVPNDLFHDNELFDEEDDLPLVQREYKRKRGRPRKMEAQTCKCKICKKVFTSKKDLKVHLQTHIEDKIFDKVQQCLFCDVKYSRLNHLVRHITKHDKPGLKHSCGKCDKTFEAAVDLLKHSNEHLNSENNDDPVDKQVIKLETEADIKMETNELSTVAVETNTETLDQNDTHEDSTPPFDDFPFSDIDDRSDEDDMFIEYEGKKENKKKSKRNGKDNNTLYECKECSRVLTTYMGLKIHMRRHTGSYLIKCEVCNKSFSKTSHLIKHSRTHGIDDKLKGDTKSETRVKVEIPCEYCERKFKYRKSFKQHVKVEHGISDVDSDAEKSTENNRKPDNATNNEECLEQLQNDADGELSTGDNLNVEQQFCEEDEEVVVNLEVDTPNVKKIRAKNQVCHVCGASFARVNHLTRHMTLHRSVLVHQCDRCEKAFATESHLKAHIEDEHINKPYVCTVCNKPFSRGEHLIRHLKVHQSSPDKEENLKCSICDSVFTRSDHLARHTKIHLLQDKRHVCVDCGKAFNRLDNLRTHQRIHTGIKDTSKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCTECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKNHRRASGHWMETQPDLKGGHRVEPVTPAHEPMPIRFKSHKVRSKEEPMESVKPAITPIADTQSSLTEHSVSVEEIQAQPQRILMGIMGNIKLQAADSLLIDSTKLVELHTGLVNLPTVIQTANGEEIKLKSEVQNFNITQVEEVDKDEVSGGFQDATVIYSSVGHTSTTFTTSENFNFQNYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392926;
90% Identity: -
80% Identity: -