Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000111.1:384530-401604[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00011 0.0095 16.6 2.0 1 23 382 404 382 404 0.97

2 18 2.5e-05 0.0021 18.7 1.8 1 20 410 429 410 432 0.94

3 18 5.4e-05 0.0047 17.6 1.8 1 23 438 460 438 460 0.98

4 18 0.00015 0.013 16.2 4.4 1 21 466 486 466 488 0.94

5 18 2e-05 0.0017 19.0 4.4 1 23 494 516 494 516 0.99

6 18 2.3e-05 0.002 18.8 5.3 1 23 522 544 522 544 0.97

7 18 6.9e-06 0.0006 20.4 7.2 1 23 550 572 550 572 0.97

8 18 9.1e-08 7.9e-06 26.3 2.7 1 23 578 600 578 600 0.98

9 18 6.7e-05 0.0058 17.3 6.7 1 23 606 628 606 628 0.97

10 18 9.1e-05 0.0079 16.9 4.8 1 23 634 656 634 656 0.97

11 18 3e-07 2.6e-05 24.7 1.9 1 23 662 684 662 684 0.98

12 18 1.9e-06 0.00016 22.2 7.8 1 23 690 712 690 712 0.98

13 18 5.9e-05 0.0051 17.5 8.1 1 23 718 740 718 740 0.98

14 18 1.6e-05 0.0014 19.3 7.7 1 23 746 768 746 768 0.98

15 18 9.7e-06 0.00084 20.0 7.1 1 23 774 796 774 796 0.97

16 18 3.6e-05 0.0031 18.2 0.8 1 23 802 824 802 824 0.98

17 18 0.081 7.1 7.6 5.0 1 23 834 856 834 856 0.98

18 18 2.2e-07 1.9e-05 25.1 1.6 1 23 862 884 862 884 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00011	0.0095	16.6	2.0	1	23	382	404	382	404	0.97
2	18	2.5e-05	0.0021	18.7	1.8	1	20	410	429	410	432	0.94
3	18	5.4e-05	0.0047	17.6	1.8	1	23	438	460	438	460	0.98
4	18	0.00015	0.013	16.2	4.4	1	21	466	486	466	488	0.94
5	18	2e-05	0.0017	19.0	4.4	1	23	494	516	494	516	0.99
6	18	2.3e-05	0.002	18.8	5.3	1	23	522	544	522	544	0.97
7	18	6.9e-06	0.0006	20.4	7.2	1	23	550	572	550	572	0.97
8	18	9.1e-08	7.9e-06	26.3	2.7	1	23	578	600	578	600	0.98
9	18	6.7e-05	0.0058	17.3	6.7	1	23	606	628	606	628	0.97
10	18	9.1e-05	0.0079	16.9	4.8	1	23	634	656	634	656	0.97
11	18	3e-07	2.6e-05	24.7	1.9	1	23	662	684	662	684	0.98
12	18	1.9e-06	0.00016	22.2	7.8	1	23	690	712	690	712	0.98
13	18	5.9e-05	0.0051	17.5	8.1	1	23	718	740	718	740	0.98
14	18	1.6e-05	0.0014	19.3	7.7	1	23	746	768	746	768	0.98
15	18	9.7e-06	0.00084	20.0	7.1	1	23	774	796	774	796	0.97
16	18	3.6e-05	0.0031	18.2	0.8	1	23	802	824	802	824	0.98
17	18	0.081	7.1	7.6	5.0	1	23	834	856	834	856	0.98
18	18	2.2e-07	1.9e-05	25.1	1.6	1	23	862	884	862	884	0.98

Sequence Information

Coding Sequence: ATGAATGCTGATAACCAGAACGTTCTGACCGGGGGACATAATTCCTCCAGTGCTCAGGGTCAAAGACAGCCCCCGACGACTTCCGTGCCGACCGATCTGAGGGTGAACACGACCGCTTTGAACGCAGTCGCTCTGAGCAGCAGCATCGCCAAGTACTGGGTACTGACGAACTTCCTGCCCGGTCCGATACCGCAAGTCTCGGTGTACGGCCTGCCAGGAGCGAACAGGGAGAACCAGGGAAAGGTGGGACAAGATGGAATGCTTGGTCAACACGCAGGTCTCCTCTCGGCCGACCCGTTGCTTCTCCAACAGCACTCGCAAATCCCAGTCAGTATAGCTTCACAGGGAAACATCGGGGTTCACAGCAATTCCATACATCTAGACAACTCGCACGTTACCAATCACCATCAGAATGAAAATATCTCATCACAGAATCAAAACCAATTACCCAGAGATATCAGAATGCCACATCCTCAGCAACCGAGTCAACCGCAGCCTCAGCAGTCCCAGCAACCTCAGCACGGCAACCATTCGAGTCAGCAGAACTTAGTACAAGTACAGGTCCAGGACAATCTGGTGTCGGTCATTGAGGAGAACAAGGACCAAAAGGACATTATATCGGCTCAGCTGCAAGCCGCCCAGCTCCAGCTCAACGAGAACCAGCTGAACCAGCAGCAAGCATTGACTAGACTAGTGGTAGATTCGGCTTTCGAAAGGAGGATTCAAAATGGCGGTTCGAAATGTCTGTTGCAGGATCTCAAAGGCGGGAACCTGATGGACGTAAGGACGGCGGATGGTAGCATAGTTAAGATCCAGACTAACATGCAAGAGCAGGAGTTGGTGAAAACGCTCGGTGTCGACATAGTACAAAATATGTATAAGGTTAACGTTGATGATTTGAATCAGCTTTTGGCATATCACGAAATTTTCGGGAAGCTACAAGGCAATCAAAGTGACGTCTCAAACCAGAATGTACCACAAAATGCCTCGACCAATAGCAATAACACTAGTACCACCAATAACAACAATAATAACTTGAACCTCCCGCCCAGTAACCCGGCGCTATCCGTGATAACGAAGGACGAGCAGGAGCCTTCCACAAGCAACGTGTCTGGCGACAACCCCTCATTGGTCCTAGGCACGCATGTCTGTGATCTTTGCGGTAAAATATTCCAATTTCGTTACCAATTAATCGTCCATCGACGCTACCACACTGAGCGCAAGCCGTTCACCTGTCAGGTGTGTGGGAAGGCATTCACAAACGCCCAGGAACTGACCAGGCACGGGAAGTGCCACCTGGGGGGCAGCATGTTTACCTGTACCGTATGCTTTCACGTTTTCGCCACCGACGCTTCCTTGGAGCGTCACATGAAGAGGCATTCGACTGAGAAGCCATACGCGTGTACGACTTGCGGGAAAACGTTCGCAAGGAAGGAACATTTGGATAATCATACAAGGTGTCACACTGGGGAGACCCCTTACAGGTGCCAGTACTGTGCGAAATCTTTTACGAGAAAAGAGCACATGGTGAATCACGTCAGGAAACACACAGGCGAAACGCCTCACAGATGCGAGATCTGCAAGAAATCTTTCACGAGGAAAGAGCATTTCATGAATCATGTAATGTGGCACACAGGCGAGACCCCACACCATTGCACTGTCTGTGGAAAGAAATACACCAGAAAGGAACACCTCGCCAATCACATGCGGAGCCATACGAACGATACTCCTTTCAGGTGCGAGATTTGCGGGAAGTCCTTCACGAGGAAGGAGCATTTCACAAACCATATCATGTGGCATACAGGCGAGACGCCCCACAGGTGCGATTTCTGCTCCAAGACCTTCACGAGGAAGGAACACCTGCTGAACCACGTCAGGCAGCATACTGGGGAGTCGCCGCACCGGTGCGGTTTCTGCGCCAAGTCTTTTACCAGAAAAGAACACCTCATCAACCACGTCAGGCAGCACACGGGCGAGACGCCTTTCCGGTGTAGCATATGCCCGAAGGCCTTCACGAGGAAGGACCACTTGGTCAACCACGTCAGGCAACACACGGGGGAGTCCCCGCACAAGTGTACTTACTGTACAAAGTCTTTCACGAGGAAGGAGCATCTGAACAATCACATACGGCAGCACACGGGCGAGTCTCCCCACAGGTGTCACTTCTGCGCCAAGTCTTTCACTAGGAAAGAGCATTTGACGAATCACGTTCGGATACACACAGGGGAATCCCCACACCGATGCGAGTTCTGCCAGAAAACCTTCACCAGAAAAGAACACCTGACGAACCATCTAAGGCAGCACACTGGCGAAACCCCACATTGCTGTAATATTTGTTCCAAACCCTTCACGAGAAAAGAACACTTAGTCAATCATATGCGTTCCCACACAGGCGAACGTCCTTTCTCCTGCAACGAATGTGGGAAGTCATTTCCGTTGAAAGGCAACCTCCTCTTCCATCAGCGGTCCCACAACAAGGGAGCGGCAGCAGAAAGGCCTTTTAGGTGTGATTTGTGTGAAAAAGATTTCATGTGTAAAGGACATTTGGTGTCGCATAGGAGATCTCATAATGGTGATCGACCGCACACTTGCCCGGATTGCGGTAAAACCTTTGTGGAAAAAGGAAATATGCTCAGACACATGAAGAAACATACCGTTGAAAATGGACAGGTGAACCTTTCGAATCAGCCGGTGAGCCAAGTCCAGCCACCTTCTCAGCAACAGAGTAGCTCTCAGCAGTCTCAGCCGCAATCGAGTGCGGCCAGCATTCAGATACCCCAAGTGCAGAGCGGACAGGCGCAGCAGCAGGCTCCTCCCAGTAACATGCCGCAACCCTCTCACCTATCCCTTCATCCCCCAAACAGCCATTCCGTCGTAGTGCCTACCAATAACAATGTTCTAGCTTCTTATTGA
Protein Sequence: MNADNQNVLTGGHNSSSAQGQRQPPTTSVPTDLRVNTTALNAVALSSSIAKYWVLTNFLPGPIPQVSVYGLPGANRENQGKVGQDGMLGQHAGLLSADPLLLQQHSQIPVSIASQGNIGVHSNSIHLDNSHVTNHHQNENISSQNQNQLPRDIRMPHPQQPSQPQPQQSQQPQHGNHSSQQNLVQVQVQDNLVSVIEENKDQKDIISAQLQAAQLQLNENQLNQQQALTRLVVDSAFERRIQNGGSKCLLQDLKGGNLMDVRTADGSIVKIQTNMQEQELVKTLGVDIVQNMYKVNVDDLNQLLAYHEIFGKLQGNQSDVSNQNVPQNASTNSNNTSTTNNNNNNLNLPPSNPALSVITKDEQEPSTSNVSGDNPSLVLGTHVCDLCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCTVCFHVFATDASLERHMKRHSTEKPYACTTCGKTFARKEHLDNHTRCHTGETPYRCQYCAKSFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCAKSFTRKEHLINHVRQHTGETPFRCSICPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLNNHIRQHTGESPHRCHFCAKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNICSKPFTRKEHLVNHMRSHTGERPFSCNECGKSFPLKGNLLFHQRSHNKGAAAERPFRCDLCEKDFMCKGHLVSHRRSHNGDRPHTCPDCGKTFVEKGNMLRHMKKHTVENGQVNLSNQPVSQVQPPSQQQSSSQQSQPQSSAASIQIPQVQSGQAQQQAPPSNMPQPSHLSLHPPNSHSVVVPTNNNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392922;
90% Identity: iTF_00392922;
80% Identity: -