Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000288.1:177328-187444[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.2e-07 5.4e-05 23.7 3.7 3 23 67 87 65 87 0.98

2 17 5.2e-06 0.00045 20.8 2.6 1 23 93 115 93 115 0.98

3 17 4.4e-07 3.8e-05 24.2 0.5 1 23 121 143 121 143 0.98

4 17 4.3e-08 3.7e-06 27.4 1.0 3 23 151 171 149 171 0.98

5 17 9.9e-08 8.6e-06 26.2 0.2 1 23 177 199 177 199 0.98

6 17 8.6e-05 0.0075 17.0 4.7 2 23 206 227 205 227 0.97

7 17 4.1e-07 3.5e-05 24.3 0.3 1 23 233 255 233 255 0.98

8 17 2.8e-09 2.5e-07 31.1 0.4 1 23 261 283 261 283 0.98

9 17 4.2e-07 3.6e-05 24.3 1.1 1 23 404 426 404 426 0.97

10 17 0.00027 0.023 15.4 2.1 1 21 432 452 432 453 0.95

11 17 0.00096 0.083 13.7 3.6 1 23 458 480 458 480 0.98

12 17 1.8e-06 0.00015 22.3 0.1 1 23 486 508 486 508 0.98

13 17 9.6e-09 8.4e-07 29.4 2.3 1 23 514 536 514 536 0.98

14 17 3.3e-07 2.8e-05 24.6 4.7 1 23 542 564 542 564 0.98

15 17 1.5e-05 0.0013 19.4 1.0 1 23 570 592 570 592 0.98

16 17 2.9e-08 2.5e-06 27.9 1.9 1 23 598 620 598 620 0.99

17 17 2.7e-06 0.00024 21.7 0.3 1 23 626 648 626 648 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.2e-07	5.4e-05	23.7	3.7	3	23	67	87	65	87	0.98
2	17	5.2e-06	0.00045	20.8	2.6	1	23	93	115	93	115	0.98
3	17	4.4e-07	3.8e-05	24.2	0.5	1	23	121	143	121	143	0.98
4	17	4.3e-08	3.7e-06	27.4	1.0	3	23	151	171	149	171	0.98
5	17	9.9e-08	8.6e-06	26.2	0.2	1	23	177	199	177	199	0.98
6	17	8.6e-05	0.0075	17.0	4.7	2	23	206	227	205	227	0.97
7	17	4.1e-07	3.5e-05	24.3	0.3	1	23	233	255	233	255	0.98
8	17	2.8e-09	2.5e-07	31.1	0.4	1	23	261	283	261	283	0.98
9	17	4.2e-07	3.6e-05	24.3	1.1	1	23	404	426	404	426	0.97
10	17	0.00027	0.023	15.4	2.1	1	21	432	452	432	453	0.95
11	17	0.00096	0.083	13.7	3.6	1	23	458	480	458	480	0.98
12	17	1.8e-06	0.00015	22.3	0.1	1	23	486	508	486	508	0.98
13	17	9.6e-09	8.4e-07	29.4	2.3	1	23	514	536	514	536	0.98
14	17	3.3e-07	2.8e-05	24.6	4.7	1	23	542	564	542	564	0.98
15	17	1.5e-05	0.0013	19.4	1.0	1	23	570	592	570	592	0.98
16	17	2.9e-08	2.5e-06	27.9	1.9	1	23	598	620	598	620	0.99
17	17	2.7e-06	0.00024	21.7	0.3	1	23	626	648	626	648	0.98

Sequence Information

Coding Sequence: ATGAACAACAGCGGTCCAGCGGCGGCGTCCCTCAGAAACATCTGCTTGAAGTGTCGATCACGTTATGAGGAATTTTCGATGTACGTCGAGCGGTGCAAGGCCAACGCGGCCGTAATAGACGGACTACCGTCCGTCGGACGGGTGAAAGACATGCAATGCCGTCAATTAAAAAAGaaggaaattgacgagccttacggatgtccccactgcggtaaaactttcccgtggcgttcccacctgaagagacacatgcggacccactcggccgacaagggtttccggtgttcattctgtgacaaggccttcgtccaatacggccacctaagaaaccacgtgcggctccacaccggcgacagcccgttccagtgctcgacctgcggcaagaccttcaccgagcccggcagcctgaaggtccatcggaacatccacacgggcgagaaacctttcggctgtaccgtctgcggcaagacgttcacccagtccggcaacctgacgaggcaccgacggatccacgccggcgacaaacctttcagatgcgccgtctgcggcagggccttcaccgaatcgggcaacctgaagacccacatgcgtgtccatacgggcgacaggcccgtccgatgtacgcgctgcgacaagaccttcgcccatcacagcagcatgaactctcacctgcgcgtccacacgggcgacaagtccttcgaatgttcgtcgtgcgggaagtccttcgtccagcccgccgcgtttgagcgacacctgaagacccacacgggcgagaaacccttcgcctgtccggattgcgggaaacggttttccaattcgtccggcctgaacaggcacgtccgtactcacagTACCCGCCTCGATACTTCGAGCACCATGAGCCTCAGTACGACCAGGTGCGACTGGTGCCTGCAAGAGTCGCCCATCGAGACGATCGACGACGAGCTGTGGCGCTTCTGGAACATAATCAGCGTCGAGGATTCGACGGGTGCGTTCCTCAGGAACATCTGTCCGAGGTGCAAGACACGCTGCGAGGACTTCTCGACGTACGTCGAGCGGTGCAAGGTGCACGAGTCCGTGATCGACGAGATGCTGTCCGTCGCCCGTTTCAAGGCGGAGCCCGTCGACGTCGAGTACCATCCGCTGGTCAAGCAGGAGGAGGAGGAGGAggaggttccgccggcgggaggcttgtcgagacgccgtcgcttcgattgcgcaatctgcggcagaccgttctcccagtcataccacctgaagggccacctgcgcacccacacgggcgagaagccgtacaagtgtccgcattgcagtaaaaccttcgcgtggacgagcaacctgcagagccacctgtgcgtccgcgagaggccgttcaagtgttcgctgtgcgacaagggctttcacagtttcgtcaagttgaggaaccactcgcgcgtccacacgggcgacaagccgttcgagtgcgagcggtgcggcaaggcgttcaccgagtcaggtcagctagggaaacacatgaacgtccacacgggcgcgaaaccattcaagtgtacgatctgcgacaagagtttcaaccagtcggctaacttgaacaggcaccagcggtaccacgcgggcgtcaggccgttcaagtgttcgcactgcgataagacgttcccacaatcggcccacttgaagcgtcacctgagcgtccacactggcgacaaaccatacaagtgcaagttgtgtgacaagacgttcgccggcacgagcaatcggcgcgtccacatgtcggtccacgccggcgacaaacgtttcaagtgttcgcggtgcgacaggacgttcgtgcagtccagcgacctgaaggcgcacatgcgtaggcacaccgacgataatccgtataggtgttcgcagtgcgacgcgacgttcgctcgttccttcggtctgaaggctcacatgctcgtccatacgagtcggagaccttccgcgagctcCCATGGTAAACCTTAA
Protein Sequence: MNNSGPAAASLRNICLKCRSRYEEFSMYVERCKANAAVIDGLPSVGRVKDMQCRQLKKKEIDEPYGCPHCGKTFPWRSHLKRHMRTHSADKGFRCSFCDKAFVQYGHLRNHVRLHTGDSPFQCSTCGKTFTEPGSLKVHRNIHTGEKPFGCTVCGKTFTQSGNLTRHRRIHAGDKPFRCAVCGRAFTESGNLKTHMRVHTGDRPVRCTRCDKTFAHHSSMNSHLRVHTGDKSFECSSCGKSFVQPAAFERHLKTHTGEKPFACPDCGKRFSNSSGLNRHVRTHSTRLDTSSTMSLSTTRCDWCLQESPIETIDDELWRFWNIISVEDSTGAFLRNICPRCKTRCEDFSTYVERCKVHESVIDEMLSVARFKAEPVDVEYHPLVKQEEEEEEVPPAGGLSRRRRFDCAICGRPFSQSYHLKGHLRTHTGEKPYKCPHCSKTFAWTSNLQSHLCVRERPFKCSLCDKGFHSFVKLRNHSRVHTGDKPFECERCGKAFTESGQLGKHMNVHTGAKPFKCTICDKSFNQSANLNRHQRYHAGVRPFKCSHCDKTFPQSAHLKRHLSVHTGDKPYKCKLCDKTFAGTSNRRVHMSVHAGDKRFKCSRCDRTFVQSSDLKAHMRRHTDDNPYRCSQCDATFARSFGLKAHMLVHTSRRPSASSHGKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392424;
90% Identity: iTF_00392424;
80% Identity: iTF_00392424;